RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	YCR102C	P25608	368 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	RPL5	P26321	297 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	NIP100	P33420	868 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	PRY2	P36110	329 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	MRPL10	P36520	322 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	MRPL15	P36523	253 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	ASC1	P38011	319 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	NDC80	P40460	691 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	SAS2	P40963	338 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	EGT2	P42835	1041 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	SEH1	P53011	349 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	CDH1	P53197	566 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	REX4	Q08237	289 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	SKI7	Q08491	747 aa	Predicted RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	NDJ1	Q12366	352 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	PRP46	Q12417	451 aa	Predicted RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	SNF8	Q12483	233 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	CBP2	P03874	630 aa	Predicted RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	ERG4	P25340	473 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	ASF2	P32448	525 aa	Predicted RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	SKG6	P32900	734 aa	Predicted RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	SWD2	P36104	329 aa	Predicted RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	SEO1	P39709	593 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	DFG10	P40526	253 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	MET28	P40573	187 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	NAS6	P50086	228 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	FMS1	P50264	508 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	UBC11	P52492	156 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	SHE10	P53075	577 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	YGL159W	P53110	370 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	ATP23	P53722	227 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	YPL068C	Q02749	293 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	SNZ1	Q03148	297 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	CCE1	Q03702	353 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	TRI1	Q05024	226 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	SNT309	Q06091	175 aa	Predicted RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	GPN3	Q06543	272 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	APC2	Q12440	853 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	RAX2	Q12465	1220 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	RPS28B	P0C0X0	67 aa	Known RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	URE2	P23202	354 aa	Known RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	LRE1	P25579	583 aa	Known RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	GCG1	P32656	232 aa	Known RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	DEF1	P35732	738 aa	Known RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	FRE2	P36033	711 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	YPT10	P38146	199 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	INM1	P38710	295 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	YHK8	P38776	514 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	GEP4	P38812	185 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	SSO2	P39926	295 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	YNL095C	P53932	642 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	SLT2	Q00772	484 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	EGD1	Q02642	157 aa	Known RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	HER2	Q03557	464 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	IVY1	Q04934	453 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	THI7	Q05998	598 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	CTR3	Q06686	241 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	RPS28A	Q3E7X9	67 aa	Predicted RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	DET1	Q99288	334 aa	Known RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	CDC33	P07260	213 aa	Known RBP	1.13	□□□□□ -2.23
CLU1	YMR012W	NAM2	P11325	894 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	GLN3	P18494	730 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	MXR2	P25566	168 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	SPT10	P35208	640 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	MOH1	P38191	138 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	YAL037W	P39728	267 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	COA1	P40452	197 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	YPS6	P40583	537 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	ATG27	P46989	271 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	RPC17	P47076	161 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	VOA1	P53262	265 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	IBD2	P53892	351 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	SAM50	P53969	484 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	GCN5	Q03330	439 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	YLR173W	Q06247	608 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	BCP1	Q06338	283 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	TAZ1	Q06510	381 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	YDL109C	Q12103	647 aa		1.13	□□□□□ -2.23
CLU1	YMR012W	SAL1	D6W196	494 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	NHP6B	P11633	99 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	CLN3	P13365	580 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	FRS2	P15625	503 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	HEM15	P16622	393 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	TSC10	P38342	320 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	SDH8	P38345	138 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	VBA2	P38358	474 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	SIC1	P38634	284 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	TDA11	P38854	504 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	PYK2	P52489	506 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	MSC1	Q03104	513 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	PIR3	Q03180	325 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	GTO3	Q04806	366 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	YLH47	Q06493	454 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	YPR078C	Q06813	372 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	YEH2	Q07950	538 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	SNX3	Q08826	162 aa	Known RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	RKM1	Q08961	583 aa	Predicted RBP	1.12	□□□□□ -2.23
CLU1	YMR012W	RAD57	P25301	460 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	TRX3	P25372	127 aa		1.12	□□□□□ -2.23
CLU1	YMR012W	KES1	P35844	434 aa	Known RBP	1.12	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms