RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W YLR040CQ07988 224 aa6.9□□□□□ -1.3
SNF7YLR025W PCL9Q12477 304 aa6.9□□□□□ -1.3
SNF7YLR025W YDL007C-AQ2V2Q0 85 aa6.9□□□□□ -1.3
SNF7YLR025W YKL033W-AQ86ZR7 236 aa6.9□□□□□ -1.3
SNF7YLR025W HRP1Q99383 534 aaKnown RBP6.9□□□□□ -1.3
SNF7YLR025W YGL041W-AP0C5N3 154 aa6.89□□□□□ -1.31
SNF7YLR025W YOL163WP0CF20 169 aa6.89□□□□□ -1.31
SNF7YLR025W PRP28P23394 588 aa6.89□□□□□ -1.31
SNF7YLR025W CHA1P25379 360 aaKnown RBP6.89□□□□□ -1.31
SNF7YLR025W MGR1P25573 417 aa6.89□□□□□ -1.31
SNF7YLR025W SSH4P32343 579 aa6.89□□□□□ -1.31
SNF7YLR025W YHK8P38776 514 aa6.89□□□□□ -1.31
SNF7YLR025W AIM10P39965 576 aaKnown RBP6.89□□□□□ -1.31
SNF7YLR025W ATG18P43601 500 aa6.89□□□□□ -1.31
SNF7YLR025W COQ5P49017 307 aa6.89□□□□□ -1.31
SNF7YLR025W SPT20P50875 604 aa6.89□□□□□ -1.31
SNF7YLR025W ARO8P53090 500 aaKnown RBP6.89□□□□□ -1.31
SNF7YLR025W RRN9P53437 365 aa6.89□□□□□ -1.31
SNF7YLR025W YAT1P80235 687 aa6.89□□□□□ -1.31
SNF7YLR025W RHO4Q00246 291 aa6.89□□□□□ -1.31
SNF7YLR025W TDA1Q03533 586 aa6.89□□□□□ -1.31
SNF7YLR025W CTK1Q03957 528 aaKnown RBP6.89□□□□□ -1.31
SNF7YLR025W NAT4Q04751 285 aa6.89□□□□□ -1.31
SNF7YLR025W YPS7Q06325 596 aa6.89□□□□□ -1.31
SNF7YLR025W YDR061WQ12298 539 aa6.89□□□□□ -1.31
SNF7YLR025W YLR111WQ12528 110 aa6.89□□□□□ -1.31
SNF7YLR025W STT4P37297 1900 aa6.89□□□□□ -1.31
SNF7YLR025W HIS5P07172 385 aa6.88□□□□□ -1.31
SNF7YLR025W THR1P17423 357 aaKnown RBP6.88□□□□□ -1.31
SNF7YLR025W RPB5P20434 215 aa6.88□□□□□ -1.31
SNF7YLR025W SAR1P20606 190 aaKnown RBP6.88□□□□□ -1.31
SNF7YLR025W SCL1P21243 252 aaKnown RBP6.88□□□□□ -1.31
SNF7YLR025W YCK1P23291 538 aa6.88□□□□□ -1.31
SNF7YLR025W IMG2P25642 146 aaPredicted RBP6.88□□□□□ -1.31
SNF7YLR025W YBR137WP38276 179 aa6.88□□□□□ -1.31
SNF7YLR025W YFL054CP43549 646 aa6.88□□□□□ -1.31
SNF7YLR025W TIM54P47045 478 aa6.88□□□□□ -1.31
SNF7YLR025W YAE1P47118 141 aaPredicted RBP6.88□□□□□ -1.31
SNF7YLR025W BAT2P47176 376 aaKnown RBP6.88□□□□□ -1.31
SNF7YLR025W AAD10P47182 288 aa6.88□□□□□ -1.31
SNF7YLR025W DIE2P50076 525 aa6.88□□□□□ -1.31
SNF7YLR025W EXG2P52911 562 aa6.88□□□□□ -1.31
SNF7YLR025W COS10P52924 374 aa6.88□□□□□ -1.31
SNF7YLR025W MPC1P53157 130 aaKnown RBP6.88□□□□□ -1.31
SNF7YLR025W MEP3P53390 489 aa6.88□□□□□ -1.31
SNF7YLR025W YNR061CP53747 219 aa6.88□□□□□ -1.31
SNF7YLR025W CSL4P53859 292 aaPredicted RBP6.88□□□□□ -1.31
SNF7YLR025W YKR011CQ02209 353 aa6.88□□□□□ -1.31
SNF7YLR025W PLP1Q04004 230 aa6.88□□□□□ -1.31
SNF7YLR025W RQC1Q05468 723 aaKnown RBP6.88□□□□□ -1.31
SNF7YLR025W ORM2Q06144 216 aa6.88□□□□□ -1.31
SNF7YLR025W MLC2Q06580 163 aa6.88□□□□□ -1.31
SNF7YLR025W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
SNF7YLR025W SFG1Q12507 346 aa6.88□□□□□ -1.31
SNF7YLR025W YEL009C-AA0A023PZF2 135 aa6.87□□□□□ -1.31
SNF7YLR025W HSP30P25619 332 aa6.87□□□□□ -1.31
SNF7YLR025W BUB3P26449 341 aa6.87□□□□□ -1.31
SNF7YLR025W SPT14P32363 452 aa6.87□□□□□ -1.31
SNF7YLR025W CDC12P32468 407 aaKnown RBP6.87□□□□□ -1.31
SNF7YLR025W SUR1P33300 382 aa6.87□□□□□ -1.31
SNF7YLR025W YRO2P38079 344 aa6.87□□□□□ -1.31
SNF7YLR025W RPL10P41805 221 aaKnown RBP6.87□□□□□ -1.31
SNF7YLR025W ZIM17P42844 174 aa6.87□□□□□ -1.31
SNF7YLR025W IRC7P43623 340 aa6.87□□□□□ -1.31
SNF7YLR025W IDS2P46958 469 aa6.87□□□□□ -1.31
SNF7YLR025W SYF2P53277 215 aaPredicted RBP6.87□□□□□ -1.31
SNF7YLR025W MRPL50P53724 139 aa6.87□□□□□ -1.31
SNF7YLR025W TDA7P53882 636 aaPredicted RBP6.87□□□□□ -1.31
SNF7YLR025W MRPL13Q02204 264 aa6.87□□□□□ -1.31
SNF7YLR025W YPL068CQ02749 293 aa6.87□□□□□ -1.31
SNF7YLR025W YPL113CQ02961 396 aa6.87□□□□□ -1.31
SNF7YLR025W YMR315WQ04869 349 aaKnown RBP6.87□□□□□ -1.31
SNF7YLR025W YPR196WQ06595 470 aa6.87□□□□□ -1.31
SNF7YLR025W PFA4Q12006 378 aa6.87□□□□□ -1.31
SNF7YLR025W NAG1Q8TGN9 163 aa6.87□□□□□ -1.31
SNF7YLR025W AHC2P25649 128 aa6.86□□□□□ -1.31
SNF7YLR025W TOD6P34219 525 aa6.86□□□□□ -1.31
SNF7YLR025W DOA1P36037 715 aa6.86□□□□□ -1.31
SNF7YLR025W VPS51P36116 164 aa6.86□□□□□ -1.31
SNF7YLR025W SHE1P38200 338 aa6.86□□□□□ -1.31
SNF7YLR025W MBA1P38300 278 aa6.86□□□□□ -1.31
SNF7YLR025W PLB1P39105 664 aa6.86□□□□□ -1.31
SNF7YLR025W SYG1P40528 902 aa6.86□□□□□ -1.31
SNF7YLR025W IRC18P47056 224 aa6.86□□□□□ -1.31
SNF7YLR025W BPL1P48445 690 aaPredicted RBP6.86□□□□□ -1.31
SNF7YLR025W VPS73P53142 486 aaKnown RBP6.86□□□□□ -1.31
SNF7YLR025W SRP1Q02821 542 aaKnown RBP6.86□□□□□ -1.31
SNF7YLR025W YMR310CQ04867 317 aaPredicted RBP6.86□□□□□ -1.31
SNF7YLR025W IPK1Q06667 281 aa6.86□□□□□ -1.31
SNF7YLR025W SKI7Q08491 747 aaPredicted RBP6.86□□□□□ -1.31
SNF7YLR025W TPO4Q12256 659 aa6.86□□□□□ -1.31
SNF7YLR025W YOR214CQ12282 236 aa6.86□□□□□ -1.31
SNF7YLR025W CAR2P07991 424 aaKnown RBP6.85□□□□□ -1.31
SNF7YLR025W MCK1P21965 375 aaKnown RBP6.85□□□□□ -1.31
SNF7YLR025W TAH1P25638 111 aaPredicted RBP6.85□□□□□ -1.31
SNF7YLR025W ORC2P32833 620 aa6.85□□□□□ -1.31
SNF7YLR025W SUI1P32911 108 aaKnown RBP6.85□□□□□ -1.31
SNF7YLR025W MSN2P33748 704 aa6.85□□□□□ -1.31
SNF7YLR025W SHE2P36068 246 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
SNF7YLR025W MRPL37P36532 105 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms