RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W MAL32P38158 584 aa3.98□□□□□ -1.77
SOF1YLL011W CCT4P39078 528 aaKnown RBP3.98□□□□□ -1.77
SOF1YLL011W COX16P47081 118 aa3.98□□□□□ -1.77
SOF1YLL011W VPS25P47142 202 aa3.98□□□□□ -1.77
SOF1YLL011W GND2P53319 492 aa3.98□□□□□ -1.77
SOF1YLL011W PXR1P53335 271 aaPredicted RBP3.98□□□□□ -1.77
SOF1YLL011W MAL12P53341 584 aa3.98□□□□□ -1.77
SOF1YLL011W RRN9P53437 365 aa3.98□□□□□ -1.77
SOF1YLL011W SUN4P53616 420 aa3.98□□□□□ -1.77
SOF1YLL011W HER2Q03557 464 aa3.98□□□□□ -1.77
SOF1YLL011W YMR209CQ03648 457 aa3.98□□□□□ -1.77
SOF1YLL011W ENT5Q03769 411 aaKnown RBP3.98□□□□□ -1.77
SOF1YLL011W PBP4Q07362 185 aaKnown RBP3.98□□□□□ -1.77
SOF1YLL011W PAM18Q07914 168 aa3.98□□□□□ -1.77
SOF1YLL011W RAX1Q08760 435 aa3.98□□□□□ -1.77
SOF1YLL011W YLR112WQ12130 139 aa3.98□□□□□ -1.77
SOF1YLL011W NCA2Q12374 616 aa3.98□□□□□ -1.77
SOF1YLL011W YOP1Q12402 180 aa3.98□□□□□ -1.77
SOF1YLL011W SET6Q12529 373 aa3.98□□□□□ -1.77
SOF1YLL011W SIR4P11978 1358 aa3.97□□□□□ -1.77
SOF1YLL011W ARF2P19146 181 aaKnown RBP3.97□□□□□ -1.77
SOF1YLL011W FAR1P21268 830 aa3.97□□□□□ -1.77
SOF1YLL011W YCR100CP25606 316 aa3.97□□□□□ -1.77
SOF1YLL011W RSM22P36056 628 aa3.97□□□□□ -1.77
SOF1YLL011W YPK3P38070 525 aa3.97□□□□□ -1.77
SOF1YLL011W CSM2P40465 213 aa3.97□□□□□ -1.77
SOF1YLL011W YRB2P40517 327 aa3.97□□□□□ -1.77
SOF1YLL011W YGR210CP42942 411 aa3.97□□□□□ -1.77
SOF1YLL011W MHP1P43638 1398 aa3.97□□□□□ -1.77
SOF1YLL011W HIT1P46973 164 aa3.97□□□□□ -1.77
SOF1YLL011W SEH1P53011 349 aaKnown RBP3.97□□□□□ -1.77
SOF1YLL011W HOP2P53187 214 aa3.97□□□□□ -1.77
SOF1YLL011W APC1P53886 1748 aa3.97□□□□□ -1.77
SOF1YLL011W SAM50P53969 484 aa3.97□□□□□ -1.77
SOF1YLL011W SLT2Q00772 484 aa3.97□□□□□ -1.77
SOF1YLL011W SPR6Q01684 191 aa3.97□□□□□ -1.77
SOF1YLL011W BNA7Q04066 261 aa3.97□□□□□ -1.77
SOF1YLL011W THI20Q08224 551 aa3.97□□□□□ -1.77
SOF1YLL011W BSC1Q12140 328 aa3.97□□□□□ -1.77
SOF1YLL011W ARP6Q12509 438 aa3.97□□□□□ -1.77
SOF1YLL011W YOS9Q99220 542 aa3.97□□□□□ -1.77
SOF1YLL011W EXO70P19658 623 aa3.96□□□□□ -1.78
SOF1YLL011W MRPL8P22353 238 aa3.96□□□□□ -1.78
SOF1YLL011W RRT12P25381 491 aa3.96□□□□□ -1.78
SOF1YLL011W COQ3P27680 312 aa3.96□□□□□ -1.78
SOF1YLL011W PDR3P33200 976 aa3.96□□□□□ -1.78
SOF1YLL011W YNK1P36010 153 aaKnown RBP3.96□□□□□ -1.78
SOF1YLL011W CUE2P36075 443 aaKnown RBP3.96□□□□□ -1.78
SOF1YLL011W RPC37P36121 282 aa3.96□□□□□ -1.78
SOF1YLL011W DTR1P38125 572 aa3.96□□□□□ -1.78
SOF1YLL011W LDB7P38210 180 aa3.96□□□□□ -1.78
SOF1YLL011W IST2P38250 946 aa3.96□□□□□ -1.78
SOF1YLL011W SLX1P38324 304 aa3.96□□□□□ -1.78
SOF1YLL011W YHR182WP38870 785 aa3.96□□□□□ -1.78
SOF1YLL011W FHL1P39521 936 aa3.96□□□□□ -1.78
SOF1YLL011W VPS52P39904 641 aa3.96□□□□□ -1.78
SOF1YLL011W SLM1P40485 686 aa3.96□□□□□ -1.78
SOF1YLL011W YIR014WP40570 242 aa3.96□□□□□ -1.78
SOF1YLL011W ABM1P47146 123 aa3.96□□□□□ -1.78
SOF1YLL011W YNR048WP53740 393 aa3.96□□□□□ -1.78
SOF1YLL011W NOP13P53883 403 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
SOF1YLL011W YPL080CQ02826 108 aa3.96□□□□□ -1.78
SOF1YLL011W YLR283WQ05867 314 aa3.96□□□□□ -1.78
SOF1YLL011W BNA5Q05979 453 aa3.96□□□□□ -1.78
SOF1YLL011W BER1Q06688 274 aaKnown RBP3.96□□□□□ -1.78
SOF1YLL011W SMC5Q08204 1093 aa3.96□□□□□ -1.78
SOF1YLL011W PLP2Q12017 286 aa3.96□□□□□ -1.78
SOF1YLL011W ERP3Q12403 225 aa3.96□□□□□ -1.78
SOF1YLL011W RPN13O13563 156 aa3.95□□□□□ -1.78
SOF1YLL011W TEF1P02994 458 aaKnown RBP3.95□□□□□ -1.78
SOF1YLL011W RHO1P06780 209 aaKnown RBP3.95□□□□□ -1.78
SOF1YLL011W NHP6BP11633 99 aaKnown RBP3.95□□□□□ -1.78
SOF1YLL011W MET16P18408 261 aaPredicted RBP3.95□□□□□ -1.78
SOF1YLL011W OSM1P21375 501 aaKnown RBP3.95□□□□□ -1.78
SOF1YLL011W VPS1P21576 704 aaKnown RBP3.95□□□□□ -1.78
SOF1YLL011W PUT3P25502 979 aaPredicted RBP3.95□□□□□ -1.78
SOF1YLL011W MEI5P32489 222 aa3.95□□□□□ -1.78
SOF1YLL011W ECM15P35195 104 aa3.95□□□□□ -1.78
SOF1YLL011W AIM29P36154 155 aa3.95□□□□□ -1.78
SOF1YLL011W COA1P40452 197 aa3.95□□□□□ -1.78
SOF1YLL011W RTS2P40962 232 aa3.95□□□□□ -1.78
SOF1YLL011W AGP3P43548 558 aa3.95□□□□□ -1.78
SOF1YLL011W AZR1P50080 613 aa3.95□□□□□ -1.78
SOF1YLL011W LST7P53237 242 aa3.95□□□□□ -1.78
SOF1YLL011W OKP1P53298 406 aa3.95□□□□□ -1.78
SOF1YLL011W MKC7P53379 596 aa3.95□□□□□ -1.78
SOF1YLL011W BET4Q00618 327 aa3.95□□□□□ -1.78
SOF1YLL011W IRC15Q02733 499 aa3.95□□□□□ -1.78
SOF1YLL011W RLI1Q03195 608 aaKnown RBP3.95□□□□□ -1.78
SOF1YLL011W MRPL51Q06090 140 aaPredicted RBP3.95□□□□□ -1.78
SOF1YLL011W GRS2Q06817 618 aa3.95□□□□□ -1.78
SOF1YLL011W SDO1Q07953 250 aaKnown RBP3.95□□□□□ -1.78
SOF1YLL011W RPO41P13433 1351 aaKnown RBP3.94□□□□□ -1.78
SOF1YLL011W SSC1P0CS90 654 aaKnown RBP3.94□□□□□ -1.78
SOF1YLL011W COQ1P18900 473 aa3.94□□□□□ -1.78
SOF1YLL011W DAL82P21705 255 aa3.94□□□□□ -1.78
SOF1YLL011W URE2P23202 354 aaKnown RBP3.94□□□□□ -1.78
SOF1YLL011W PBN1P25580 416 aa3.94□□□□□ -1.78
SOF1YLL011W PPA2P28239 310 aa3.94□□□□□ -1.78
SOF1YLL011W ZIP1P31111 875 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms