RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C ANR2P36090 516 aaPredicted RBP1.95□□□□□ -2.1
UBP11YKR098C EGT2P42835 1041 aa1.95□□□□□ -2.1
UBP11YKR098C LSG1P53145 640 aaKnown RBP1.95□□□□□ -2.1
UBP11YKR098C OKP1P53298 406 aa1.95□□□□□ -2.1
UBP11YKR098C MKC7P53379 596 aa1.95□□□□□ -2.1
UBP11YKR098C YHC1Q05900 231 aaKnown RBP1.95□□□□□ -2.1
UBP11YKR098C HRI1Q05905 244 aaKnown RBP1.95□□□□□ -2.1
UBP11YKR098C YDL109CQ12103 647 aa1.95□□□□□ -2.1
UBP11YKR098C MCT1Q12283 360 aa1.95□□□□□ -2.1
UBP11YKR098C RPL23AP0CX41 137 aaKnown RBP1.95□□□□□ -2.1
UBP11YKR098C RPL23BP0CX42 137 aaKnown RBP1.95□□□□□ -2.1
UBP11YKR098C PET123P17558 318 aa1.95□□□□□ -2.1
UBP11YKR098C GPI12P23797 304 aa1.95□□□□□ -2.1
UBP11YKR098C DAL2P25335 343 aa1.95□□□□□ -2.1
UBP11YKR098C ARO2P28777 376 aaKnown RBP1.95□□□□□ -2.1
UBP11YKR098C MRPL37P36532 105 aa1.95□□□□□ -2.1
UBP11YKR098C RCK2P38623 610 aa1.95□□□□□ -2.1
UBP11YKR098C SMF2P38778 549 aa1.95□□□□□ -2.1
UBP11YKR098C DSE1P40077 573 aa1.95□□□□□ -2.1
UBP11YKR098C YFL040WP43562 540 aa1.95□□□□□ -2.1
UBP11YKR098C SHY1P53266 389 aa1.95□□□□□ -2.1
UBP11YKR098C YNL260CP53846 198 aa1.95□□□□□ -2.1
UBP11YKR098C REX2P54964 269 aaKnown RBP1.95□□□□□ -2.1
UBP11YKR098C TRM82Q03774 444 aa1.95□□□□□ -2.1
UBP11YKR098C CMS1Q07897 291 aaKnown RBP1.95□□□□□ -2.1
UBP11YKR098C FRE8Q12209 686 aa1.95□□□□□ -2.1
UBP11YKR098C JID1Q12350 301 aa1.95□□□□□ -2.1
UBP11YKR098C RPN6Q12377 434 aa1.95□□□□□ -2.1
UBP11YKR098C IZH2Q12442 317 aa1.95□□□□□ -2.1
UBP11YKR098C RBK1P25332 333 aa1.94□□□□□ -2.1
UBP11YKR098C YUH1P35127 236 aa1.94□□□□□ -2.1
UBP11YKR098C DTR1P38125 572 aa1.94□□□□□ -2.1
UBP11YKR098C HEM14P40012 539 aa1.94□□□□□ -2.1
UBP11YKR098C YNL320WP42840 284 aa1.94□□□□□ -2.1
UBP11YKR098C ATG18P43601 500 aa1.94□□□□□ -2.1
UBP11YKR098C CLD1P53264 445 aa1.94□□□□□ -2.1
UBP11YKR098C CRH1P53301 507 aa1.94□□□□□ -2.1
UBP11YKR098C BIO4P53630 237 aa1.94□□□□□ -2.1
UBP11YKR098C IMP4P53941 290 aaKnown RBP1.94□□□□□ -2.1
UBP11YKR098C YPL080CQ02826 108 aa1.94□□□□□ -2.1
UBP11YKR098C RRT8Q08219 342 aa1.94□□□□□ -2.1
UBP11YKR098C SAM4Q08985 325 aaKnown RBP1.94□□□□□ -2.1
UBP11YKR098C SLF1Q12034 447 aaKnown RBP1.94□□□□□ -2.1
UBP11YKR098C SIA1Q12212 622 aa1.94□□□□□ -2.1
UBP11YKR098C FMP16Q12497 93 aa1.94□□□□□ -2.1
UBP11YKR098C CPR3P25719 182 aa1.93□□□□□ -2.1
UBP11YKR098C ITR2P30606 609 aa1.93□□□□□ -2.1
UBP11YKR098C PMT2P31382 759 aa1.93□□□□□ -2.1
UBP11YKR098C RPT5P33297 434 aaKnown RBP1.93□□□□□ -2.1
UBP11YKR098C DFG10P40526 253 aa1.93□□□□□ -2.1
UBP11YKR098C MEP2P41948 499 aa1.93□□□□□ -2.1
UBP11YKR098C YFR057WP43625 151 aa1.93□□□□□ -2.1
UBP11YKR098C BIR1P47134 954 aa1.93□□□□□ -2.1
UBP11YKR098C YNL050CP53952 270 aa1.93□□□□□ -2.1
UBP11YKR098C SUR7P54003 302 aa1.93□□□□□ -2.1
UBP11YKR098C CSI1Q04368 295 aa1.93□□□□□ -2.1
UBP11YKR098C YMR027WQ04371 470 aa1.93□□□□□ -2.1
UBP11YKR098C BCP1Q06338 283 aa1.93□□□□□ -2.1
UBP11YKR098C IRC25Q07951 179 aa1.93□□□□□ -2.1
UBP11YKR098C TLG2Q08144 397 aa1.93□□□□□ -2.1
UBP11YKR098C DDC1Q08949 612 aa1.93□□□□□ -2.1
UBP11YKR098C RAD7P06779 565 aa1.93□□□□□ -2.1
UBP11YKR098C PHO2P07269 559 aa1.93□□□□□ -2.1
UBP11YKR098C MIR1P23641 311 aaKnown RBP1.93□□□□□ -2.1
UBP11YKR098C TPO5P36029 618 aa1.93□□□□□ -2.1
UBP11YKR098C YMR262WP38430 313 aa1.93□□□□□ -2.1
UBP11YKR098C LSM12P38828 187 aaKnown RBP1.93□□□□□ -2.1
UBP11YKR098C PET100P38958 111 aa1.93□□□□□ -2.1
UBP11YKR098C SCC4P40090 624 aa1.93□□□□□ -2.1
UBP11YKR098C YNL208WP40159 199 aaKnown RBP1.93□□□□□ -2.1
UBP11YKR098C SLM1P40485 686 aa1.93□□□□□ -2.1
UBP11YKR098C SNM1P40993 198 aa1.93□□□□□ -2.1
UBP11YKR098C YGR210CP42942 411 aa1.93□□□□□ -2.1
UBP11YKR098C FMP33P46998 180 aa1.93□□□□□ -2.1
UBP11YKR098C COX16P47081 118 aa1.93□□□□□ -2.1
UBP11YKR098C EMC2P47133 292 aaKnown RBP1.93□□□□□ -2.1
UBP11YKR098C MPP6P53725 186 aaPredicted RBP1.93□□□□□ -2.1
UBP11YKR098C RRN5Q02983 363 aa1.93□□□□□ -2.1
UBP11YKR098C IRC4Q03036 179 aa1.93□□□□□ -2.1
UBP11YKR098C YMR010WQ03687 405 aa1.93□□□□□ -2.1
UBP11YKR098C PBP4Q07362 185 aaKnown RBP1.93□□□□□ -2.1
UBP11YKR098C YLL007CQ07799 665 aa1.93□□□□□ -2.1
UBP11YKR098C PLP2Q12017 286 aa1.93□□□□□ -2.1
UBP11YKR098C NAG1Q8TGN9 163 aa1.93□□□□□ -2.1
UBP11YKR098C ADH2P00331 348 aaKnown RBP1.92□□□□□ -2.1
UBP11YKR098C REP1P03871 373 aa1.92□□□□□ -2.1
UBP11YKR098C FRS2P15625 503 aaKnown RBP1.92□□□□□ -2.1
UBP11YKR098C CSM1P25651 190 aa1.92□□□□□ -2.1
UBP11YKR098C MEI5P32489 222 aa1.92□□□□□ -2.1
UBP11YKR098C HIS2P38635 335 aa1.92□□□□□ -2.1
UBP11YKR098C CTM1P38818 585 aa1.92□□□□□ -2.1
UBP11YKR098C FHL1P39521 936 aa1.92□□□□□ -2.1
UBP11YKR098C CWC22P53333 577 aaKnown RBP1.92□□□□□ -2.1
UBP11YKR098C YTH1Q06102 208 aaPredicted RBP1.92□□□□□ -2.1
UBP11YKR098C YLR012CQ07927 99 aa1.92□□□□□ -2.1
UBP11YKR098C TAF10Q12030 206 aa1.92□□□□□ -2.1
UBP11YKR098C ATP16Q12165 160 aa1.92□□□□□ -2.1
UBP11YKR098C SFM1Q12314 213 aa1.92□□□□□ -2.1
UBP11YKR098C TDH1P00360 332 aaKnown RBP1.92□□□□□ -2.1
UBP11YKR098C RPS14AP06367 137 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms