RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	DPB11	P47027	764 aa	Predicted RBP	5.22	□□□□□ -1.57
RPT1	YKL145W	UBX6	P47049	396 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	ECM27	P47144	725 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	COS6	P53344	381 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	SKO1	Q02100	647 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	RPL6A	Q02326	176 aa	Known RBP	5.22	□□□□□ -1.57
RPT1	YKL145W	SPC2	Q04969	178 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	GGA1	Q06336	557 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	YOL159C	Q08300	171 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	MUM3	Q08750	479 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	USV1	Q12132	391 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	INP53	Q12271	1107 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	TRM13	Q12383	476 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	SNF8	Q12483	233 aa		5.22	□□□□□ -1.57
RPT1	YKL145W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.22	□□□□□ -1.57
RPT1	YKL145W	BRR1	Q99177	341 aa	Predicted RBP	5.22	□□□□□ -1.57
RPT1	YKL145W	THP2	O13539	261 aa	Known RBP	5.21	□□□□□ -1.58
RPT1	YKL145W	AAC1	P04710	309 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	STE4	P18851	423 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	PPH21	P23594	369 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	ELO2	P25358	347 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	LAC1	P28496	418 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	ATP7	P30902	174 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	TFC1	P32367	649 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	SEC17	P32602	292 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	VPS21	P36017	210 aa	Known RBP	5.21	□□□□□ -1.58
RPT1	YKL145W	GLG1	P36143	616 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	ROT2	P38138	954 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	RRN10	P38204	145 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	FAD1	P38913	306 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	MLH1	P38920	769 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	GGC1	P38988	300 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	FMP52	P40008	231 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	RGI1	P40043	161 aa	Predicted RBP	5.21	□□□□□ -1.58
RPT1	YKL145W	CIS3	P47001	227 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	AIM22	P47051	409 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	TOM22	P49334	152 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	GET1	P53192	235 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	YGR151C	P53287	111 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	GPI1	P53306	609 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	MRPL22	P53881	309 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	SWS2	P53937	143 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	YNL033W	P53964	284 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	YNL019C	P53975	284 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	TRM82	Q03774	444 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	RNH1	Q04740	348 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	RRP45	Q05636	305 aa	Known RBP	5.21	□□□□□ -1.58
RPT1	YKL145W	RPN8	Q08723	338 aa	Known RBP	5.21	□□□□□ -1.58
RPT1	YKL145W	YOR114W	Q12219	294 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	RPN6	Q12377	434 aa		5.21	□□□□□ -1.58
RPT1	YKL145W	UNG1	P12887	359 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	YAP1	P19880	650 aa	Known RBP	5.2	□□□□□ -1.58
RPT1	YKL145W	TYR1	P20049	452 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	RVS161	P25343	265 aa	Known RBP	5.2	□□□□□ -1.58
RPT1	YKL145W	IMG1	P25626	169 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	YIM1	P28625	365 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	HIS7	P33734	552 aa	Known RBP	5.2	□□□□□ -1.58
RPT1	YKL145W	YKR073C	P36153	106 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	MRPL37	P36532	105 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	ELO1	P39540	310 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	DIM1	P41819	318 aa	Known RBP	5.2	□□□□□ -1.58
RPT1	YKL145W	KEL2	P50090	882 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	IRC15	Q02733	499 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	GMC2	Q06201	188 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	COS7	Q07788	383 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	CRT10	Q08226	957 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	YLR111W	Q12528	110 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	YPR053C	Q6Q5F3	151 aa		5.2	□□□□□ -1.58
RPT1	YKL145W	UGA1	P17649	471 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	URA4	P20051	364 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	BUD5	P25300	642 aa	Predicted RBP	5.19	□□□□□ -1.58
RPT1	YKL145W	GSH1	P32477	678 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
RPT1	YKL145W	VPS17	P32913	551 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	SOF1	P33750	489 aa	Known RBP	5.19	□□□□□ -1.58
RPT1	YKL145W	SPO23	P33757	523 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	KKQ8	P36004	724 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	ARA1	P38115	344 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	SKN7	P38889	622 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	MET30	P39014	640 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	YAL037W	P39728	267 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	APQ12	P40532	138 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	YPS6	P40583	537 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	PMT4	P46971	762 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	BIO3	P50277	480 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	SPT20	P50875	604 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	RPN14	P53196	417 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	MMT1	Q03218	510 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	TGS1	Q12052	315 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	ULA1	Q12059	462 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	RUP1	Q12242	671 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	NTO1	Q12311	748 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	STT4	P37297	1900 aa		5.19	□□□□□ -1.58
RPT1	YKL145W	MDM35	O60200	86 aa		5.18	□□□□□ -1.58
RPT1	YKL145W	GCD2	P12754	651 aa	Predicted RBP	5.18	□□□□□ -1.58
RPT1	YKL145W	YAK1	P14680	807 aa		5.18	□□□□□ -1.58
RPT1	YKL145W	TAL1	P15019	335 aa	Known RBP	5.18	□□□□□ -1.58
RPT1	YKL145W	SPO7	P18410	259 aa		5.18	□□□□□ -1.58
RPT1	YKL145W	SFC1	P33303	322 aa		5.18	□□□□□ -1.58
RPT1	YKL145W	LST4	P34239	828 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms