RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C HHF1P02309 103 aaKnown RBP1.98□□□□□ -2.09
SHE2YKL130C RAD1P06777 1100 aa1.98□□□□□ -2.09
SHE2YKL130C MEK1P24719 497 aaPredicted RBP1.98□□□□□ -2.09
SHE2YKL130C RPL5P26321 297 aaKnown RBP1.98□□□□□ -2.09
SHE2YKL130C ICL1P28240 557 aaPredicted RBP1.98□□□□□ -2.09
SHE2YKL130C ITR2P30606 609 aa1.98□□□□□ -2.09
SHE2YKL130C HXT1P32465 570 aa1.98□□□□□ -2.09
SHE2YKL130C DPH5P32469 300 aaPredicted RBP1.98□□□□□ -2.09
SHE2YKL130C MKK1P32490 508 aa1.98□□□□□ -2.09
SHE2YKL130C KAR9P32526 644 aa1.98□□□□□ -2.09
SHE2YKL130C YEL045CP32616 141 aa1.98□□□□□ -2.09
SHE2YKL130C RAD23P32628 398 aaKnown RBP1.98□□□□□ -2.09
SHE2YKL130C YUH1P35127 236 aa1.98□□□□□ -2.09
SHE2YKL130C MRPL37P36532 105 aa1.98□□□□□ -2.09
SHE2YKL130C ECM8P38246 354 aa1.98□□□□□ -2.09
SHE2YKL130C IML3P38265 245 aa1.98□□□□□ -2.09
SHE2YKL130C MMS21P38632 267 aa1.98□□□□□ -2.09
SHE2YKL130C YPT35P38815 214 aaKnown RBP1.98□□□□□ -2.09
SHE2YKL130C ATG7P38862 630 aa1.98□□□□□ -2.09
SHE2YKL130C FET3P38993 636 aa1.98□□□□□ -2.09
SHE2YKL130C FHL1P39521 936 aa1.98□□□□□ -2.09
SHE2YKL130C INA22P40576 216 aa1.98□□□□□ -2.09
SHE2YKL130C LCB3P47013 409 aa1.98□□□□□ -2.09
SHE2YKL130C COX16P47081 118 aa1.98□□□□□ -2.09
SHE2YKL130C YJR030CP47101 745 aa1.98□□□□□ -2.09
SHE2YKL130C MTM1P53320 366 aa1.98□□□□□ -2.09
SHE2YKL130C CWC22P53333 577 aaKnown RBP1.98□□□□□ -2.09
SHE2YKL130C YNL260CP53846 198 aa1.98□□□□□ -2.09
SHE2YKL130C CWC25P53854 179 aaKnown RBP1.98□□□□□ -2.09
SHE2YKL130C UBX2Q04228 584 aa1.98□□□□□ -2.09
SHE2YKL130C SAM4Q08985 325 aaKnown RBP1.98□□□□□ -2.09
SHE2YKL130C YGK3Q12222 375 aaPredicted RBP1.98□□□□□ -2.09
SHE2YKL130C LDB17Q12342 491 aa1.98□□□□□ -2.09
SHE2YKL130C YCL021W-AQ96VH3 125 aa1.98□□□□□ -2.09
SHE2YKL130C DET1Q99288 334 aaKnown RBP1.98□□□□□ -2.09
SHE2YKL130C UBA3Q99344 299 aa1.98□□□□□ -2.09
SHE2YKL130C RPA190P10964 1664 aaKnown RBP1.98□□□□□ -2.09
SHE2YKL130C FAB1P34756 2278 aa1.97□□□□□ -2.09
SHE2YKL130C VPS15P22219 1454 aa1.97□□□□□ -2.09
SHE2YKL130C NUP159P40477 1460 aa1.97□□□□□ -2.09
SHE2YKL130C RPL24AP04449 155 aaKnown RBP1.97□□□□□ -2.09
SHE2YKL130C CYC3P06182 269 aa1.97□□□□□ -2.09
SHE2YKL130C NAM2P11325 894 aa1.97□□□□□ -2.09
SHE2YKL130C RPB5P20434 215 aa1.97□□□□□ -2.09
SHE2YKL130C RPL16AP26784 199 aaKnown RBP1.97□□□□□ -2.09
SHE2YKL130C POP5P28005 173 aa1.97□□□□□ -2.09
SHE2YKL130C ECT1P33412 323 aa1.97□□□□□ -2.09
SHE2YKL130C SPO23P33757 523 aa1.97□□□□□ -2.09
SHE2YKL130C PTH1P38876 190 aaKnown RBP1.97□□□□□ -2.09
SHE2YKL130C YIL067CP40514 678 aa1.97□□□□□ -2.09
SHE2YKL130C YGL185CP53100 379 aa1.97□□□□□ -2.09
SHE2YKL130C CLD1P53264 445 aa1.97□□□□□ -2.09
SHE2YKL130C PXR1P53335 271 aaPredicted RBP1.97□□□□□ -2.09
SHE2YKL130C MKC7P53379 596 aa1.97□□□□□ -2.09
SHE2YKL130C MPP6P53725 186 aaPredicted RBP1.97□□□□□ -2.09
SHE2YKL130C TDA1Q03533 586 aa1.97□□□□□ -2.09
SHE2YKL130C ATC1Q04005 294 aa1.97□□□□□ -2.09
SHE2YKL130C CSI1Q04368 295 aa1.97□□□□□ -2.09
SHE2YKL130C CSM3Q04659 317 aa1.97□□□□□ -2.09
SHE2YKL130C RTN1Q04947 295 aaKnown RBP1.97□□□□□ -2.09
SHE2YKL130C PAL1Q05518 499 aaKnown RBP1.97□□□□□ -2.09
SHE2YKL130C PBA1Q05778 276 aa1.97□□□□□ -2.09
SHE2YKL130C YPR091CQ06833 770 aa1.97□□□□□ -2.09
SHE2YKL130C TSR1Q07381 788 aaKnown RBP1.97□□□□□ -2.09
SHE2YKL130C ALE1Q08548 619 aa1.97□□□□□ -2.09
SHE2YKL130C YOR387CQ08910 206 aa1.97□□□□□ -2.09
SHE2YKL130C FCY22Q12119 530 aa1.97□□□□□ -2.09
SHE2YKL130C SIA1Q12212 622 aa1.97□□□□□ -2.09
SHE2YKL130C HMS1Q12398 434 aa1.97□□□□□ -2.09
SHE2YKL130C SPP41P38904 1435 aa1.97□□□□□ -2.09
SHE2YKL130C RAD7P06779 565 aa1.96□□□□□ -2.1
SHE2YKL130C RPS18AP0CX55 146 aaKnown RBP1.96□□□□□ -2.1
SHE2YKL130C RPS18BP0CX56 146 aaPredicted RBP1.96□□□□□ -2.1
SHE2YKL130C SPT15P13393 240 aaKnown RBP1.96□□□□□ -2.1
SHE2YKL130C MSI1P13712 422 aa1.96□□□□□ -2.1
SHE2YKL130C CSM1P25651 190 aa1.96□□□□□ -2.1
SHE2YKL130C DEG1P31115 442 aaKnown RBP1.96□□□□□ -2.1
SHE2YKL130C FUN26P31381 517 aa1.96□□□□□ -2.1
SHE2YKL130C YBL059WP34224 193 aa1.96□□□□□ -2.1
SHE2YKL130C YKL162CP36052 402 aa1.96□□□□□ -2.1
SHE2YKL130C NDT80P38830 627 aa1.96□□□□□ -2.1
SHE2YKL130C DFG10P40526 253 aa1.96□□□□□ -2.1
SHE2YKL130C YNL320WP42840 284 aa1.96□□□□□ -2.1
SHE2YKL130C KEL2P50090 882 aa1.96□□□□□ -2.1
SHE2YKL130C MST27P53176 234 aa1.96□□□□□ -2.1
SHE2YKL130C OKP1P53298 406 aa1.96□□□□□ -2.1
SHE2YKL130C HCH1P53834 153 aa1.96□□□□□ -2.1
SHE2YKL130C YNL050CP53952 270 aa1.96□□□□□ -2.1
SHE2YKL130C REX2P54964 269 aaKnown RBP1.96□□□□□ -2.1
SHE2YKL130C YDL109CQ12103 647 aa1.96□□□□□ -2.1
SHE2YKL130C JID1Q12350 301 aa1.96□□□□□ -2.1
SHE2YKL130C FMP16Q12497 93 aa1.96□□□□□ -2.1
SHE2YKL130C YER078W-AQ3E7A2 54 aa1.96□□□□□ -2.1
SHE2YKL130C SMC4Q12267 1418 aa1.96□□□□□ -2.1
SHE2YKL130C TSC11P40061 1430 aa1.95□□□□□ -2.1
SHE2YKL130C HEM4P06174 275 aa1.95□□□□□ -2.1
SHE2YKL130C GPI12P23797 304 aa1.95□□□□□ -2.1
SHE2YKL130C DAL2P25335 343 aa1.95□□□□□ -2.1
SHE2YKL130C PRR1P28708 518 aa1.95□□□□□ -2.1
SHE2YKL130C ARO2P28777 376 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms