RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W NOP19P53317 196 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W YPR003CP53394 754 aa2.12□□□□□ -2.07
NUP100YKL068W ZRG17P53735 605 aa2.12□□□□□ -2.07
NUP100YKL068W EAF7P53911 425 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W MPS1P54199 764 aa2.12□□□□□ -2.07
NUP100YKL068W NUP116Q02630 1113 aa2.12□□□□□ -2.07
NUP100YKL068W GIP3Q03016 1276 aa2.12□□□□□ -2.07
NUP100YKL068W OST6Q03723 332 aa2.12□□□□□ -2.07
NUP100YKL068W THI7Q05998 598 aa2.12□□□□□ -2.07
NUP100YKL068W ASA1Q06822 443 aa2.12□□□□□ -2.07
NUP100YKL068W REX4Q08237 289 aa2.12□□□□□ -2.07
NUP100YKL068W RKI1Q12189 258 aa2.12□□□□□ -2.07
NUP100YKL068W YPR053CQ6Q5F3 151 aa2.12□□□□□ -2.07
NUP100YKL068W YKL033W-AQ86ZR7 236 aa2.12□□□□□ -2.07
NUP100YKL068W BRR1Q99177 341 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W RGS2Q99188 309 aa2.12□□□□□ -2.07
NUP100YKL068W YER145C-AA0A023PYF4 145 aa2.12□□□□□ -2.07
NUP100YKL068W RAD52P06778 471 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W RPL12AP0CX53 165 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W RPL12BP0CX54 165 aa2.12□□□□□ -2.07
NUP100YKL068W RNR3P21672 869 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W PUT3P25502 979 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W MXR2P25566 168 aa2.12□□□□□ -2.07
NUP100YKL068W PUB1P32588 453 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
NUP100YKL068W UBC6P33296 250 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W LST4P34239 828 aa2.12□□□□□ -2.07
NUP100YKL068W AIM24P47127 394 aa2.12□□□□□ -2.07
NUP100YKL068W SSN8P47821 323 aa2.12□□□□□ -2.07
NUP100YKL068W UBP8P50102 471 aa2.12□□□□□ -2.07
NUP100YKL068W AAT1Q01802 451 aa2.12□□□□□ -2.07
NUP100YKL068W YDR387CQ04162 555 aa2.12□□□□□ -2.07
NUP100YKL068W PBP4Q07362 185 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W AAD15Q08361 143 aa2.12□□□□□ -2.07
NUP100YKL068W SAM4Q08985 325 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W CLN3P13365 580 aa2.12□□□□□ -2.07
NUP100YKL068W POX1P13711 748 aa2.12□□□□□ -2.07
NUP100YKL068W FBA1P14540 359 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W SNF6P18888 332 aa2.12□□□□□ -2.07
NUP100YKL068W TKL1P23254 680 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W RAD57P25301 460 aa2.12□□□□□ -2.07
NUP100YKL068W FUN19P28003 413 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W VMA6P32366 345 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W ISC1P40015 477 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W BTT1P40314 149 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W YPS6P40583 537 aa2.12□□□□□ -2.07
NUP100YKL068W YJR011CP47086 261 aaPredicted RBP2.12□□□□□ -2.07
NUP100YKL068W TOS2P50078 622 aa2.12□□□□□ -2.07
NUP100YKL068W PHB2P50085 310 aa2.12□□□□□ -2.07
NUP100YKL068W GCN5Q03330 439 aa2.12□□□□□ -2.07
NUP100YKL068W NAT4Q04751 285 aa2.12□□□□□ -2.07
NUP100YKL068W ADH6Q04894 360 aaKnown RBP2.12□□□□□ -2.07
NUP100YKL068W FAR8Q05040 523 aa2.12□□□□□ -2.07
NUP100YKL068W SPO77Q06134 477 aa2.12□□□□□ -2.07
NUP100YKL068W YOR387CQ08910 206 aa2.12□□□□□ -2.07
NUP100YKL068W GPM2Q12008 311 aa2.12□□□□□ -2.07
NUP100YKL068W SIA1Q12212 622 aa2.12□□□□□ -2.07
NUP100YKL068W ERP3Q12403 225 aa2.12□□□□□ -2.07
NUP100YKL068W PNS1Q12412 539 aa2.12□□□□□ -2.07
NUP100YKL068W SNF8Q12483 233 aa2.12□□□□□ -2.07
NUP100YKL068W SEY1Q99287 776 aa2.12□□□□□ -2.07
NUP100YKL068W AI5_BETAQ9ZZX0 354 aa2.12□□□□□ -2.07
NUP100YKL068W HTB1P02293 131 aaKnown RBP2.11□□□□□ -2.07
NUP100YKL068W HTB2P02294 131 aa2.11□□□□□ -2.07
NUP100YKL068W TEF1P02994 458 aaKnown RBP2.11□□□□□ -2.07
NUP100YKL068W RPP2AP05319 106 aaKnown RBP2.11□□□□□ -2.07
NUP100YKL068W SIR3P06701 978 aa2.11□□□□□ -2.07
NUP100YKL068W MRP1P10662 321 aaKnown RBP2.11□□□□□ -2.07
NUP100YKL068W DAL82P21705 255 aa2.11□□□□□ -2.07
NUP100YKL068W BMH1P29311 267 aaKnown RBP2.11□□□□□ -2.07
NUP100YKL068W TAF14P35189 244 aa2.11□□□□□ -2.07
NUP100YKL068W APL3P38065 1025 aa2.11□□□□□ -2.07
NUP100YKL068W SUL1P38359 859 aa2.11□□□□□ -2.07
NUP100YKL068W LYS12P40495 371 aaKnown RBP2.11□□□□□ -2.07
NUP100YKL068W NAS6P50086 228 aa2.11□□□□□ -2.07
NUP100YKL068W SEH1P53011 349 aaKnown RBP2.11□□□□□ -2.07
NUP100YKL068W BIO4P53630 237 aa2.11□□□□□ -2.07
NUP100YKL068W RSM10Q03201 203 aa2.11□□□□□ -2.07
NUP100YKL068W NUP53Q03790 475 aa2.11□□□□□ -2.07
NUP100YKL068W RIM13Q03792 727 aa2.11□□□□□ -2.07
NUP100YKL068W HSP31Q04432 237 aa2.11□□□□□ -2.07
NUP100YKL068W TMN2Q04562 672 aa2.11□□□□□ -2.07
NUP100YKL068W YLR108CQ12259 485 aa2.11□□□□□ -2.07
NUP100YKL068W YKL183C-AQ3E765 70 aa2.11□□□□□ -2.07
NUP100YKL068W YCL012CQ8J0M4 134 aa2.11□□□□□ -2.07
NUP100YKL068W YDR157WA0A023PZE8 133 aa2.11□□□□□ -2.07
NUP100YKL068W REV1P12689 985 aa2.11□□□□□ -2.07
NUP100YKL068W YMR31P19955 123 aa2.11□□□□□ -2.07
NUP100YKL068W IES6P32617 166 aa2.11□□□□□ -2.07
NUP100YKL068W SKN1P33336 771 aa2.11□□□□□ -2.07
NUP100YKL068W THI80P35202 319 aa2.11□□□□□ -2.07
NUP100YKL068W SUR2P38992 349 aa2.11□□□□□ -2.07
NUP100YKL068W LAS21P40367 830 aa2.11□□□□□ -2.07
NUP100YKL068W SNZ3P43545 298 aa2.11□□□□□ -2.07
NUP100YKL068W TRS85P46944 698 aa2.11□□□□□ -2.07
NUP100YKL068W NBP1P52919 319 aaPredicted RBP2.11□□□□□ -2.07
NUP100YKL068W SSU72P53538 206 aaPredicted RBP2.11□□□□□ -2.07
NUP100YKL068W SNZ2P53824 298 aa2.11□□□□□ -2.07
NUP100YKL068W SKI8Q02793 397 aaPredicted RBP2.11□□□□□ -2.07
NUP100YKL068W MMT1Q03218 510 aa2.11□□□□□ -2.07
NUP100YKL068W ARP10Q04549 284 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms