RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C SNF6P18888 332 aa5.41□□□□□ -1.54
DEF1YKL054C ACB1P31787 87 aa5.41□□□□□ -1.54
DEF1YKL054C NUP2P32499 720 aa5.41□□□□□ -1.54
DEF1YKL054C FLO10P36170 1169 aa5.41□□□□□ -1.54
DEF1YKL054C SUL1P38359 859 aa5.41□□□□□ -1.54
DEF1YKL054C ARG2P40360 574 aa5.41□□□□□ -1.54
DEF1YKL054C PHB2P50085 310 aa5.41□□□□□ -1.54
DEF1YKL054C SOL4P53315 255 aa5.41□□□□□ -1.54
DEF1YKL054C YIP3P53633 176 aa5.41□□□□□ -1.54
DEF1YKL054C ZRG17P53735 605 aa5.41□□□□□ -1.54
DEF1YKL054C SLD5Q03406 294 aa5.41□□□□□ -1.54
DEF1YKL054C SEC13Q04491 297 aaKnown RBP5.41□□□□□ -1.54
DEF1YKL054C PGK1P00560 416 aaKnown RBP5.4□□□□□ -1.54
DEF1YKL054C HTB1P02293 131 aaKnown RBP5.4□□□□□ -1.54
DEF1YKL054C HTB2P02294 131 aa5.4□□□□□ -1.54
DEF1YKL054C ECM15P35195 104 aa5.4□□□□□ -1.54
DEF1YKL054C CBP4P37267 147 aa5.4□□□□□ -1.54
DEF1YKL054C FES1P38260 290 aa5.4□□□□□ -1.54
DEF1YKL054C PRS2P38620 318 aaKnown RBP5.4□□□□□ -1.54
DEF1YKL054C LEU5P38702 357 aa5.4□□□□□ -1.54
DEF1YKL054C QRI1P43123 477 aaKnown RBP5.4□□□□□ -1.54
DEF1YKL054C JHD2P47156 728 aaPredicted RBP5.4□□□□□ -1.54
DEF1YKL054C SNA4Q07549 140 aa5.4□□□□□ -1.54
DEF1YKL054C YFR057WP43625 151 aa5.4□□□□□ -1.55
DEF1YKL054C NBP1P52919 319 aaPredicted RBP5.4□□□□□ -1.55
DEF1YKL054C NIF3P53081 288 aa5.4□□□□□ -1.55
DEF1YKL054C YGL159WP53110 370 aa5.4□□□□□ -1.55
DEF1YKL054C COS1P53822 381 aa5.4□□□□□ -1.55
DEF1YKL054C RNT1Q02555 471 aa5.4□□□□□ -1.55
DEF1YKL054C ATG17Q06410 417 aa5.4□□□□□ -1.55
DEF1YKL054C NDE2Q07500 545 aa5.4□□□□□ -1.55
DEF1YKL054C GAT3Q07928 141 aa5.4□□□□□ -1.55
DEF1YKL054C MCH4Q08268 501 aa5.4□□□□□ -1.55
DEF1YKL054C YPQ1Q12010 308 aa5.4□□□□□ -1.55
DEF1YKL054C TPK3P05986 398 aa5.39□□□□□ -1.55
DEF1YKL054C MNS1P32906 549 aa5.39□□□□□ -1.55
DEF1YKL054C SWD2P36104 329 aaPredicted RBP5.39□□□□□ -1.55
DEF1YKL054C THO1P40040 218 aaKnown RBP5.39□□□□□ -1.55
DEF1YKL054C DDI1P40087 428 aa5.39□□□□□ -1.55
DEF1YKL054C IBA57P47158 497 aa5.39□□□□□ -1.55
DEF1YKL054C NUP100Q02629 959 aa5.39□□□□□ -1.55
DEF1YKL054C HER2Q03557 464 aa5.39□□□□□ -1.55
DEF1YKL054C BNA5Q05979 453 aa5.39□□□□□ -1.55
DEF1YKL054C DIC1Q06143 298 aa5.39□□□□□ -1.55
DEF1YKL054C DPB2P24482 689 aaPredicted RBP5.39□□□□□ -1.55
DEF1YKL054C MEI4P29467 408 aa5.39□□□□□ -1.55
DEF1YKL054C SSO1P32867 290 aa5.39□□□□□ -1.55
DEF1YKL054C AST1P35183 429 aa5.39□□□□□ -1.55
DEF1YKL054C YIP1P53039 248 aa5.39□□□□□ -1.55
DEF1YKL054C GPI1P53306 609 aa5.39□□□□□ -1.55
DEF1YKL054C SSU72P53538 206 aaPredicted RBP5.39□□□□□ -1.55
DEF1YKL054C DIG1Q03063 452 aaKnown RBP5.39□□□□□ -1.55
DEF1YKL054C EBS1Q03466 884 aaKnown RBP5.39□□□□□ -1.55
DEF1YKL054C SET6Q12529 373 aa5.39□□□□□ -1.55
DEF1YKL054C AI5_BETAQ9ZZX0 354 aa5.39□□□□□ -1.55
DEF1YKL054C HIS1P00498 297 aaKnown RBP5.38□□□□□ -1.55
DEF1YKL054C MRP1P10662 321 aaKnown RBP5.38□□□□□ -1.55
DEF1YKL054C YCR007CP25354 239 aa5.38□□□□□ -1.55
DEF1YKL054C TOD6P34219 525 aa5.38□□□□□ -1.55
DEF1YKL054C ASN1P49089 572 aaKnown RBP5.38□□□□□ -1.55
DEF1YKL054C GET1P53192 235 aa5.38□□□□□ -1.55
DEF1YKL054C GPM2Q12008 311 aa5.38□□□□□ -1.55
DEF1YKL054C DAP1Q12091 152 aa5.38□□□□□ -1.55
DEF1YKL054C RGT2Q12300 763 aa5.38□□□□□ -1.55
DEF1YKL054C YOP1Q12402 180 aa5.38□□□□□ -1.55
DEF1YKL054C MRPL8P22353 238 aa5.38□□□□□ -1.55
DEF1YKL054C SNC1P31109 117 aa5.38□□□□□ -1.55
DEF1YKL054C AME1P38313 324 aa5.38□□□□□ -1.55
DEF1YKL054C LYS1P38998 373 aaRIP-Chip data5.38□□□□□ -1.55 RIP-Chip
DEF1YKL054C SMB1P40018 196 aaKnown RBP5.38□□□□□ -1.55
DEF1YKL054C LGE1Q02796 332 aaKnown RBP5.38□□□□□ -1.55
DEF1YKL054C YPL077CQ02831 240 aa5.38□□□□□ -1.55
DEF1YKL054C ARP10Q04549 284 aa5.38□□□□□ -1.55
DEF1YKL054C VPS74Q06385 345 aa5.38□□□□□ -1.55
DEF1YKL054C ERP3Q12403 225 aa5.38□□□□□ -1.55
DEF1YKL054C RPP0P05317 312 aaKnown RBP5.37□□□□□ -1.55
DEF1YKL054C RPL31AP0C2H8 113 aaKnown RBP5.37□□□□□ -1.55
DEF1YKL054C FBA1P14540 359 aaKnown RBP5.37□□□□□ -1.55
DEF1YKL054C CMK2P22517 447 aa5.37□□□□□ -1.55
DEF1YKL054C MBR1P23493 339 aa5.37□□□□□ -1.55
DEF1YKL054C LSB5P25369 354 aa5.37□□□□□ -1.55
DEF1YKL054C LOS1P33418 1100 aaPredicted RBP5.37□□□□□ -1.55
DEF1YKL054C GPX2P38143 162 aa5.37□□□□□ -1.55
DEF1YKL054C ARN1P38731 627 aa5.37□□□□□ -1.55
DEF1YKL054C IKI1P38874 309 aa5.37□□□□□ -1.55
DEF1YKL054C HAT2P39984 401 aa5.37□□□□□ -1.55
DEF1YKL054C POG1P40473 351 aa5.37□□□□□ -1.55
DEF1YKL054C SNZ3P43545 298 aa5.37□□□□□ -1.55
DEF1YKL054C FRE4P53746 719 aa5.37□□□□□ -1.55
DEF1YKL054C SNZ2P53824 298 aa5.37□□□□□ -1.55
DEF1YKL054C SSC1P0CS90 654 aaKnown RBP5.36□□□□□ -1.55
DEF1YKL054C BMT2P38278 337 aa5.36□□□□□ -1.55
DEF1YKL054C BDH2P39713 417 aa5.36□□□□□ -1.55
DEF1YKL054C UBP5P39944 805 aa5.36□□□□□ -1.55
DEF1YKL054C ALG8P40351 577 aa5.36□□□□□ -1.55
DEF1YKL054C YKE4P40544 346 aa5.36□□□□□ -1.55
DEF1YKL054C KEG1P43614 200 aa5.36□□□□□ -1.55
DEF1YKL054C VEL1P53058 206 aa5.36□□□□□ -1.55
DEF1YKL054C YCR102CP25608 368 aa5.36□□□□□ -1.55
DEF1YKL054C COX13P32799 129 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 270.7 ms