RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W HIS1P00498 297 aaKnown RBP3.96□□□□□ -1.77
TFA1YKL028W TCP1P12612 559 aaKnown RBP3.96□□□□□ -1.77
TFA1YKL028W EXO70P19658 623 aa3.96□□□□□ -1.77
TFA1YKL028W YMC1P32331 307 aa3.96□□□□□ -1.77
TFA1YKL028W IES6P32617 166 aa3.96□□□□□ -1.77
TFA1YKL028W MCR1P36060 302 aaKnown RBP3.96□□□□□ -1.77
TFA1YKL028W PHD1P36093 366 aa3.96□□□□□ -1.77
TFA1YKL028W VPS51P36116 164 aa3.96□□□□□ -1.77
TFA1YKL028W DTR1P38125 572 aa3.96□□□□□ -1.77
TFA1YKL028W MIC12P38341 106 aa3.96□□□□□ -1.77
TFA1YKL028W OSH3P38713 996 aaKnown RBP3.96□□□□□ -1.77
TFA1YKL028W SMF2P38778 549 aa3.96□□□□□ -1.77
TFA1YKL028W YPT11P48559 417 aa3.96□□□□□ -1.77
TFA1YKL028W YNR048WP53740 393 aa3.96□□□□□ -1.77
TFA1YKL028W SPR6Q01684 191 aa3.96□□□□□ -1.77
TFA1YKL028W YPL080CQ02826 108 aa3.96□□□□□ -1.77
TFA1YKL028W MSS11Q03825 758 aa3.96□□□□□ -1.77
TFA1YKL028W RTT103Q05543 409 aa3.96□□□□□ -1.77
TFA1YKL028W ABP140Q08641 628 aaKnown RBP3.96□□□□□ -1.77
TFA1YKL028W SNF8Q12483 233 aa3.96□□□□□ -1.77
TFA1YKL028W YKL183C-AQ3E765 70 aa3.96□□□□□ -1.77
TFA1YKL028W AI5_BETAQ9ZZX0 354 aa3.96□□□□□ -1.77
TFA1YKL028W BNR1P40450 1375 aa3.96□□□□□ -1.78
TFA1YKL028W PGK1P00560 416 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W PAB1P04147 577 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
TFA1YKL028W YBR121C-AP0C5L4 52 aa3.95□□□□□ -1.78
TFA1YKL028W YAR066WP0CX18 203 aa3.95□□□□□ -1.78
TFA1YKL028W YHR214WP0CX19 203 aa3.95□□□□□ -1.78
TFA1YKL028W PTP1P25044 335 aa3.95□□□□□ -1.78
TFA1YKL028W LOS1P33418 1100 aaPredicted RBP3.95□□□□□ -1.78
TFA1YKL028W APD1P38281 316 aa3.95□□□□□ -1.78
TFA1YKL028W TDA11P38854 504 aa3.95□□□□□ -1.78
TFA1YKL028W SEC72P39742 193 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W THO1P40040 218 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W DDI1P40087 428 aa3.95□□□□□ -1.78
TFA1YKL028W CSM2P40465 213 aa3.95□□□□□ -1.78
TFA1YKL028W YIL001WP40560 513 aa3.95□□□□□ -1.78
TFA1YKL028W YCH1P42937 148 aa3.95□□□□□ -1.78
TFA1YKL028W YFL040WP43562 540 aa3.95□□□□□ -1.78
TFA1YKL028W HOC1P47124 396 aa3.95□□□□□ -1.78
TFA1YKL028W ABM1P47146 123 aa3.95□□□□□ -1.78
TFA1YKL028W TIS11P47977 285 aa3.95□□□□□ -1.78
TFA1YKL028W CWC23P52868 283 aaPredicted RBP3.95□□□□□ -1.78
TFA1YKL028W RTC4P53850 401 aa3.95□□□□□ -1.78
TFA1YKL028W CSM3Q04659 317 aa3.95□□□□□ -1.78
TFA1YKL028W BSP1Q06604 576 aa3.95□□□□□ -1.78
TFA1YKL028W ASR1Q06834 288 aa3.95□□□□□ -1.78
TFA1YKL028W YOR387CQ08910 206 aa3.95□□□□□ -1.78
TFA1YKL028W YLR108CQ12259 485 aa3.95□□□□□ -1.78
TFA1YKL028W ARP6Q12509 438 aa3.95□□□□□ -1.78
TFA1YKL028W DET1Q99288 334 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W YMR31P19955 123 aa3.95□□□□□ -1.78
TFA1YKL028W SPO11P23179 398 aa3.95□□□□□ -1.78
TFA1YKL028W YCR100CP25606 316 aa3.95□□□□□ -1.78
TFA1YKL028W ITR2P30606 609 aa3.95□□□□□ -1.78
TFA1YKL028W YEF1P32622 495 aa3.95□□□□□ -1.78
TFA1YKL028W ZRT1P32804 376 aa3.95□□□□□ -1.78
TFA1YKL028W PPZ2P33329 710 aa3.95□□□□□ -1.78
TFA1YKL028W KDX1P36005 433 aa3.95□□□□□ -1.78
TFA1YKL028W YNK1P36010 153 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W VPS21P36017 210 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W FRE2P36033 711 aa3.95□□□□□ -1.78
TFA1YKL028W MRX3P38172 270 aa3.95□□□□□ -1.78
TFA1YKL028W PRS2P38620 318 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W RCK2P38623 610 aa3.95□□□□□ -1.78
TFA1YKL028W URA8P38627 578 aaPredicted RBP3.95□□□□□ -1.78
TFA1YKL028W YHR035WP38769 630 aa3.95□□□□□ -1.78
TFA1YKL028W SUR2P38992 349 aa3.95□□□□□ -1.78
TFA1YKL028W NPT1P39683 429 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W VRG4P40107 337 aa3.95□□□□□ -1.78
TFA1YKL028W ERG10P41338 398 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W ZRG17P53735 605 aa3.95□□□□□ -1.78
TFA1YKL028W CAF40P53829 373 aa3.95□□□□□ -1.78
TFA1YKL028W MTQ1P53944 314 aa3.95□□□□□ -1.78
TFA1YKL028W SAM50P53969 484 aa3.95□□□□□ -1.78
TFA1YKL028W YPL077CQ02831 240 aa3.95□□□□□ -1.78
TFA1YKL028W IRC4Q03036 179 aa3.95□□□□□ -1.78
TFA1YKL028W RIM13Q03792 727 aa3.95□□□□□ -1.78
TFA1YKL028W GAT3Q07928 141 aa3.95□□□□□ -1.78
TFA1YKL028W THI20Q08224 551 aa3.95□□□□□ -1.78
TFA1YKL028W DSE3Q08729 430 aa3.95□□□□□ -1.78
TFA1YKL028W PFA4Q12006 378 aa3.95□□□□□ -1.78
TFA1YKL028W VIK1Q12045 647 aa3.95□□□□□ -1.78
TFA1YKL028W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
TFA1YKL028W TPT1Q12272 230 aaKnown RBP3.95□□□□□ -1.78
TFA1YKL028W RGT2Q12300 763 aa3.95□□□□□ -1.78
TFA1YKL028W YLR111WQ12528 110 aa3.95□□□□□ -1.78
TFA1YKL028W POM152P39685 1337 aa3.94□□□□□ -1.78
TFA1YKL028W TEF1P02994 458 aaKnown RBP3.94□□□□□ -1.78
TFA1YKL028W SSC1P0CS90 654 aaKnown RBP3.94□□□□□ -1.78
TFA1YKL028W RPL35AP0CX84 120 aaKnown RBP3.94□□□□□ -1.78
TFA1YKL028W RPL35BP0CX85 120 aaKnown RBP3.94□□□□□ -1.78
TFA1YKL028W POX1P13711 748 aa3.94□□□□□ -1.78
TFA1YKL028W AMD1P15274 810 aaKnown RBP3.94□□□□□ -1.78
TFA1YKL028W MBR1P23493 339 aa3.94□□□□□ -1.78
TFA1YKL028W MRPL6P32904 214 aa3.94□□□□□ -1.78
TFA1YKL028W PDR3P33200 976 aa3.94□□□□□ -1.78
TFA1YKL028W RSM22P36056 628 aa3.94□□□□□ -1.78
TFA1YKL028W PAC2P39937 518 aa3.94□□□□□ -1.78
TFA1YKL028W YNL194CP40169 301 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 778.6 ms