RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W SNF5P18480 905 aa10.33□□□□□ -0.76
SIM1YIL123W MXR2P25566 168 aa10.33□□□□□ -0.76
SIM1YIL123W HSP30P25619 332 aa10.33□□□□□ -0.76
SIM1YIL123W MRPL15P36523 253 aa10.33□□□□□ -0.76
SIM1YIL123W MCM7P38132 845 aa10.33□□□□□ -0.76
SIM1YIL123W SHE1P38200 338 aa10.33□□□□□ -0.76
SIM1YIL123W YHK8P38776 514 aa10.33□□□□□ -0.76
SIM1YIL123W CFD1P40558 293 aa10.33□□□□□ -0.76
SIM1YIL123W GDS1P41913 522 aa10.33□□□□□ -0.76
SIM1YIL123W PFS2P42841 465 aaKnown RBP10.33□□□□□ -0.76
SIM1YIL123W MDE1P47095 244 aa10.33□□□□□ -0.76
SIM1YIL123W SPC19Q03954 165 aa10.33□□□□□ -0.76
SIM1YIL123W PEX10Q05568 337 aa10.33□□□□□ -0.76
SIM1YIL123W SYO1Q07395 620 aa10.33□□□□□ -0.76
SIM1YIL123W POL2P21951 2222 aaKnown RBP10.32□□□□□ -0.76
SIM1YIL123W BAR1P12630 587 aa10.32□□□□□ -0.76
SIM1YIL123W BUD23P25627 275 aaPredicted RBP10.32□□□□□ -0.76
SIM1YIL123W PUP2P32379 260 aa10.32□□□□□ -0.76
SIM1YIL123W ZRT3P34240 503 aa10.32□□□□□ -0.76
SIM1YIL123W RSM22P36056 628 aa10.32□□□□□ -0.76
SIM1YIL123W EXO84P38261 753 aa10.32□□□□□ -0.76
SIM1YIL123W PAC1P39946 494 aaKnown RBP10.32□□□□□ -0.76
SIM1YIL123W YIL166CP40445 542 aa10.32□□□□□ -0.76
SIM1YIL123W UTP25P40498 721 aaKnown RBP10.32□□□□□ -0.76
SIM1YIL123W ICE2P40499 491 aa10.32□□□□□ -0.76
SIM1YIL123W PGA1P53896 198 aa10.32□□□□□ -0.76
SIM1YIL123W MFB1Q04922 465 aa10.32□□□□□ -0.76
SIM1YIL123W SNT309Q06091 175 aaPredicted RBP10.32□□□□□ -0.76
SIM1YIL123W FRE5Q08908 694 aa10.32□□□□□ -0.76
SIM1YIL123W SKM1Q12469 655 aa10.32□□□□□ -0.76
SIM1YIL123W YBL113CQ7M4S9 792 aa10.32□□□□□ -0.76
SIM1YIL123W SEC12P11655 471 aa10.31□□□□□ -0.76
SIM1YIL123W SNC1P31109 117 aa10.31□□□□□ -0.76
SIM1YIL123W MTC2P34246 357 aa10.31□□□□□ -0.76
SIM1YIL123W SER2P42941 309 aa10.31□□□□□ -0.76
SIM1YIL123W SNP1Q00916 300 aaPredicted RBP10.31□□□□□ -0.76
SIM1YIL123W NOG1Q02892 647 aaKnown RBP10.31□□□□□ -0.76
SIM1YIL123W PLM2Q04383 521 aa10.31□□□□□ -0.76
SIM1YIL123W YPR127WQ06494 345 aa10.31□□□□□ -0.76
SIM1YIL123W BSC6Q08280 497 aa10.31□□□□□ -0.76
SIM1YIL123W DFG16Q99234 619 aa10.31□□□□□ -0.76
SIM1YIL123W YEL009C-AA0A023PZF2 135 aa10.3□□□□□ -0.76
SIM1YIL123W GPI12P23797 304 aa10.3□□□□□ -0.76
SIM1YIL123W PTC6P25646 442 aa10.3□□□□□ -0.76
SIM1YIL123W SPT14P32363 452 aa10.3□□□□□ -0.76
SIM1YIL123W UTH1P36135 365 aa10.3□□□□□ -0.76
SIM1YIL123W YBR063CP38083 404 aa10.3□□□□□ -0.76
SIM1YIL123W MBA1P38300 278 aa10.3□□□□□ -0.76
SIM1YIL123W IPI1P38803 334 aaPredicted RBP10.3□□□□□ -0.76
SIM1YIL123W HRB1P38922 454 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76 RIP-Chip
SIM1YIL123W FMC1P40491 155 aa10.3□□□□□ -0.76
SIM1YIL123W ARO8P53090 500 aaKnown RBP10.3□□□□□ -0.76
SIM1YIL123W NCE101Q02820 53 aa10.3□□□□□ -0.76
SIM1YIL123W IPK1Q06667 281 aa10.3□□□□□ -0.76
SIM1YIL123W PEX27Q08580 376 aa10.3□□□□□ -0.76
SIM1YIL123W RKM1Q08961 583 aaPredicted RBP10.3□□□□□ -0.76
SIM1YIL123W YDL177CQ12257 170 aa10.3□□□□□ -0.76
SIM1YIL123W YOL114CQ12322 202 aa10.3□□□□□ -0.76
SIM1YIL123W RPL20AP0CX23 172 aaKnown RBP10.29□□□□□ -0.76
SIM1YIL123W RPL20BP0CX24 172 aaPredicted RBP10.29□□□□□ -0.76
SIM1YIL123W ERD2P18414 219 aa10.29□□□□□ -0.76
SIM1YIL123W PRP28P23394 588 aa10.29□□□□□ -0.76
SIM1YIL123W PRE7P23724 241 aaKnown RBP10.29□□□□□ -0.76
SIM1YIL123W DCG1P32460 244 aa10.29□□□□□ -0.76
SIM1YIL123W TIM12P32830 109 aa10.29□□□□□ -0.76
SIM1YIL123W IFA38P38286 347 aa10.29□□□□□ -0.76
SIM1YIL123W RRP4P38792 359 aaKnown RBP10.29□□□□□ -0.76
SIM1YIL123W DML1Q03652 475 aa10.29□□□□□ -0.76
SIM1YIL123W YMR315WQ04869 349 aaKnown RBP10.29□□□□□ -0.76
SIM1YIL123W PSF1Q12488 208 aa10.29□□□□□ -0.76
SIM1YIL123W PBS2P08018 668 aa10.28□□□□□ -0.76
SIM1YIL123W YGL041W-AP0C5N3 154 aa10.28□□□□□ -0.76
SIM1YIL123W SAC7P17121 654 aa10.28□□□□□ -0.76
SIM1YIL123W FPS1P23900 669 aa10.28□□□□□ -0.76
SIM1YIL123W YCR006CP25350 157 aa10.28□□□□□ -0.76
SIM1YIL123W YEF1P32622 495 aa10.28□□□□□ -0.76
SIM1YIL123W CIN1P40987 1014 aa10.28□□□□□ -0.76
SIM1YIL123W ALK1P43633 760 aaKnown RBP10.28□□□□□ -0.76
SIM1YIL123W MRH4P53166 561 aa10.28□□□□□ -0.76
SIM1YIL123W IMO32P53219 342 aa10.28□□□□□ -0.76
SIM1YIL123W SNO4Q04902 237 aa10.28□□□□□ -0.76
SIM1YIL123W HSP33Q08914 237 aaKnown RBP10.28□□□□□ -0.76
SIM1YIL123W FMP40Q08968 688 aaPredicted RBP10.28□□□□□ -0.76
SIM1YIL123W HSP32Q08992 237 aa10.28□□□□□ -0.76
SIM1YIL123W YDL176WQ12027 708 aa10.28□□□□□ -0.76
SIM1YIL123W TY1A-NL1Q12391 440 aaKnown RBP10.28□□□□□ -0.76
SIM1YIL123W SUS1Q6WNK7 96 aa10.28□□□□□ -0.76
SIM1YIL123W SIR2P06700 562 aa10.27□□□□□ -0.77
SIM1YIL123W HAP4P14064 554 aa10.27□□□□□ -0.77
SIM1YIL123W STP22P25604 385 aa10.27□□□□□ -0.77
SIM1YIL123W AHC2P25649 128 aa10.27□□□□□ -0.77
SIM1YIL123W PUB1P32588 453 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77 RIP-Chip
SIM1YIL123W MDL1P33310 695 aa10.27□□□□□ -0.77
SIM1YIL123W TAF14P35189 244 aa10.27□□□□□ -0.77
SIM1YIL123W RCN1P36054 211 aa10.27□□□□□ -0.77
SIM1YIL123W VPS52P39904 641 aa10.27□□□□□ -0.77
SIM1YIL123W MIT1P40002 666 aa10.27□□□□□ -0.77
SIM1YIL123W BPL1P48445 690 aaPredicted RBP10.27□□□□□ -0.77
SIM1YIL123W SIZ1Q04195 904 aa10.27□□□□□ -0.77
SIM1YIL123W GPN3Q06543 272 aa10.27□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms