RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	ZRT1	P32804	376 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	SDH3	P33421	198 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	DFG10	P40526	253 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	YJR085C	P47131	105 aa	Known RBP	3.88	□□□□□ -1.79
SNL1	YIL016W	SEH1	P53011	349 aa	Known RBP	3.88	□□□□□ -1.79
SNL1	YIL016W	LSG1	P53145	640 aa	Known RBP	3.88	□□□□□ -1.79
SNL1	YIL016W	MKC7	P53379	596 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	GRX3	Q03835	250 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	PPT2	Q12036	173 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	TY3A-G	Q12173	290 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	ERP3	Q12403	225 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	PRP46	Q12417	451 aa	Predicted RBP	3.88	□□□□□ -1.79
SNL1	YIL016W	TY3A-I	Q99219	290 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	KAR9	P32526	644 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	SWD2	P36104	329 aa	Predicted RBP	3.87	□□□□□ -1.79
SNL1	YIL016W	YKR015C	P36111	568 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	HIS2	P38635	335 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	RCY1	P39531	840 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	FMP33	P46998	180 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	COX16	P47081	118 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	BIO4	P53630	237 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	HCH1	P53834	153 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	UBX2	Q04228	584 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	RRN11	Q04712	507 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	RTN1	Q04947	295 aa	Known RBP	3.87	□□□□□ -1.79
SNL1	YIL016W	PBA1	Q05778	276 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	YDL199C	Q12407	687 aa		3.87	□□□□□ -1.79
SNL1	YIL016W	RPL24A	P04449	155 aa	Known RBP	3.86	□□□□□ -1.79
SNL1	YIL016W	RPS18A	P0CX55	146 aa	Known RBP	3.86	□□□□□ -1.79
SNL1	YIL016W	RPS18B	P0CX56	146 aa	Predicted RBP	3.86	□□□□□ -1.79
SNL1	YIL016W	CSE2	P33308	149 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	SPT8	P38915	602 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	YNL320W	P42840	284 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	YJL118W	P47022	219 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	OKP1	P53298	406 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	REX2	P54964	269 aa	Known RBP	3.86	□□□□□ -1.79
SNL1	YIL016W	SPP2	Q02521	185 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	IRC4	Q03036	179 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	YMR317W	Q04893	1140 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	DDC1	Q08949	612 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	YDL109C	Q12103	647 aa		3.86	□□□□□ -1.79
SNL1	YIL016W	HEM4	P06174	275 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	RPS14A	P06367	137 aa	Known RBP	3.85	□□□□□ -1.79
SNL1	YIL016W	RPL23A	P0CX41	137 aa	Known RBP	3.85	□□□□□ -1.79
SNL1	YIL016W	RPL23B	P0CX42	137 aa	Known RBP	3.85	□□□□□ -1.79
SNL1	YIL016W	MSI1	P13712	422 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	RSR1	P13856	272 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	YSR3	P23501	404 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	CHA1	P25379	360 aa	Known RBP	3.85	□□□□□ -1.79
SNL1	YIL016W	MEI5	P32489	222 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	PTH1	P38876	190 aa	Known RBP	3.85	□□□□□ -1.79
SNL1	YIL016W	KRE9	P39005	276 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	RPS14B	P39516	138 aa	Known RBP	3.85	□□□□□ -1.79
SNL1	YIL016W	SLM1	P40485	686 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	KEL2	P50090	882 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	MST27	P53176	234 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	TRM82	Q03774	444 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	ALE1	Q08548	619 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	NDD1	Q08887	554 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	BTS1	Q12051	335 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	FRE8	Q12209	686 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	RPN6	Q12377	434 aa		3.85	□□□□□ -1.79
SNL1	YIL016W	SAL1	D6W196	494 aa		3.84	□□□□□ -1.79
SNL1	YIL016W	PET100	P38958	111 aa		3.84	□□□□□ -1.79
SNL1	YIL016W	YNL208W	P40159	199 aa	Known RBP	3.84	□□□□□ -1.79
SNL1	YIL016W	YGL260W	P53056	76 aa		3.84	□□□□□ -1.79
SNL1	YIL016W	CRH1	P53301	507 aa		3.84	□□□□□ -1.79
SNL1	YIL016W	SED5	Q01590	340 aa		3.84	□□□□□ -1.79
SNL1	YIL016W	GAS2	Q06135	555 aa		3.84	□□□□□ -1.79
SNL1	YIL016W	RIF2	Q06208	395 aa		3.84	□□□□□ -1.79
SNL1	YIL016W	YDL114W	Q07530	308 aa		3.84	□□□□□ -1.79
SNL1	YIL016W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
SNL1	YIL016W	SPS100	P13130	326 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	FRS2	P15625	503 aa	Known RBP	3.83	□□□□□ -1.8
SNL1	YIL016W	DAL2	P25335	343 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	RVS161	P25343	265 aa	Known RBP	3.83	□□□□□ -1.8
SNL1	YIL016W	FUN26	P31381	517 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	SKG6	P32900	734 aa	Predicted RBP	3.83	□□□□□ -1.8
SNL1	YIL016W	COY1	P34237	679 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	FMP46	P36141	133 aa	Known RBP	3.83	□□□□□ -1.8
SNL1	YIL016W	RCK2	P38623	610 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	EGT2	P42835	1041 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	YGR210C	P42942	411 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	AGP3	P43548	558 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	YFR057W	P43625	151 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	YNL134C	P53912	376 aa	Known RBP	3.83	□□□□□ -1.8
SNL1	YIL016W	ELP3	Q02908	557 aa	Known RBP	3.83	□□□□□ -1.8
SNL1	YIL016W	YLR173W	Q06247	608 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	SLM3	Q12093	417 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	YBR298C-A	Q8TGK4	73 aa		3.83	□□□□□ -1.8
SNL1	YIL016W	HHF1	P02309	103 aa	Known RBP	3.82	□□□□□ -1.8
SNL1	YIL016W	IMP3	P32899	183 aa	Predicted RBP	3.82	□□□□□ -1.8
SNL1	YIL016W	YBL059W	P34224	193 aa		3.82	□□□□□ -1.8
SNL1	YIL016W	COS9	P36034	407 aa		3.82	□□□□□ -1.8
SNL1	YIL016W	CTM1	P38818	585 aa		3.82	□□□□□ -1.8
SNL1	YIL016W	MRX5	P47007	382 aa		3.82	□□□□□ -1.8
SNL1	YIL016W	LIA1	P47120	325 aa	Known RBP	3.82	□□□□□ -1.8
SNL1	YIL016W	CLD1	P53264	445 aa		3.82	□□□□□ -1.8
SNL1	YIL016W	SHY1	P53266	389 aa		3.82	□□□□□ -1.8
SNL1	YIL016W	LSB1	P53281	241 aa		3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms