RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C PET54P10834 293 aa2.76□□□□□ -1.97
NMD2YHR077C BUD5P25300 642 aaPredicted RBP2.76□□□□□ -1.97
NMD2YHR077C IMG2P25642 146 aaPredicted RBP2.76□□□□□ -1.97
NMD2YHR077C SNC1P31109 117 aa2.76□□□□□ -1.97
NMD2YHR077C MDM31P38880 579 aa2.76□□□□□ -1.97
NMD2YHR077C CHL4P38907 458 aa2.76□□□□□ -1.97
NMD2YHR077C FAA3P39002 694 aa2.76□□□□□ -1.97
NMD2YHR077C BUR6P40096 142 aa2.76□□□□□ -1.97
NMD2YHR077C PAC11P40960 533 aa2.76□□□□□ -1.97
NMD2YHR077C CIS3P47001 227 aa2.76□□□□□ -1.97
NMD2YHR077C LSG1P53145 640 aaKnown RBP2.76□□□□□ -1.97
NMD2YHR077C IMP4P53941 290 aaKnown RBP2.76□□□□□ -1.97
NMD2YHR077C CIK1Q01649 594 aa2.76□□□□□ -1.97
NMD2YHR077C INP1Q03694 420 aa2.76□□□□□ -1.97
NMD2YHR077C ARV1Q06541 321 aa2.76□□□□□ -1.97
NMD2YHR077C TPO4Q12256 659 aa2.76□□□□□ -1.97
NMD2YHR077C BRR1Q99177 341 aaPredicted RBP2.76□□□□□ -1.97
NMD2YHR077C DET1Q99288 334 aaKnown RBP2.76□□□□□ -1.97
NMD2YHR077C RAS1P01119 309 aa2.76□□□□□ -1.97
NMD2YHR077C HIS3P06633 220 aa2.76□□□□□ -1.97
NMD2YHR077C CAP2P13517 287 aa2.76□□□□□ -1.97
NMD2YHR077C MTC2P34246 357 aa2.76□□□□□ -1.97
NMD2YHR077C RSM22P36056 628 aa2.76□□□□□ -1.97
NMD2YHR077C APT2P36973 181 aa2.76□□□□□ -1.97
NMD2YHR077C CCZ1P38273 704 aa2.76□□□□□ -1.97
NMD2YHR077C IFA38P38286 347 aa2.76□□□□□ -1.97
NMD2YHR077C VPS52P39904 641 aa2.76□□□□□ -1.97
NMD2YHR077C YER184CP39961 794 aa2.76□□□□□ -1.97
NMD2YHR077C TIF34P40217 347 aaKnown RBP2.76□□□□□ -1.97
NMD2YHR077C AAD10P47182 288 aa2.76□□□□□ -1.97
NMD2YHR077C PAU12P53343 120 aa2.76□□□□□ -1.97
NMD2YHR077C MPA43P53583 542 aaPredicted RBP2.76□□□□□ -1.97
NMD2YHR077C SNZ1Q03148 297 aa2.76□□□□□ -1.97
NMD2YHR077C RKM1Q08961 583 aaPredicted RBP2.76□□□□□ -1.97
NMD2YHR077C SCM3Q12334 223 aa2.76□□□□□ -1.97
NMD2YHR077C YKL033W-AQ86ZR7 236 aa2.76□□□□□ -1.97
NMD2YHR077C LAG2Q92325 660 aa2.76□□□□□ -1.97
NMD2YHR077C DFG16Q99234 619 aa2.76□□□□□ -1.97
NMD2YHR077C YOR019WQ99248 730 aa2.76□□□□□ -1.97
NMD2YHR077C CAN1P04817 590 aa2.75□□□□□ -1.97
NMD2YHR077C HAP4P14064 554 aa2.75□□□□□ -1.97
NMD2YHR077C MGR1P25573 417 aa2.75□□□□□ -1.97
NMD2YHR077C CDC13P32797 924 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C ARC19P33204 171 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C OMA1P36163 345 aa2.75□□□□□ -1.97
NMD2YHR077C CHS7P38843 316 aa2.75□□□□□ -1.97
NMD2YHR077C MNL1P38888 796 aa2.75□□□□□ -1.97
NMD2YHR077C FET3P38993 636 aa2.75□□□□□ -1.97
NMD2YHR077C MSS4P38994 779 aa2.75□□□□□ -1.97
NMD2YHR077C LYS1P38998 373 aaRIP-Chip data2.75□□□□□ -1.97not detected
NMD2YHR077C MET28P40573 187 aa2.75□□□□□ -1.97
NMD2YHR077C SMK1P41808 388 aa2.75□□□□□ -1.97
NMD2YHR077C PMT6P42934 759 aa2.75□□□□□ -1.97
NMD2YHR077C MDV1P47025 714 aa2.75□□□□□ -1.97
NMD2YHR077C NGL2Q03264 515 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C FIN1Q03898 291 aa2.75□□□□□ -1.97
NMD2YHR077C SMA2Q04658 369 aa2.75□□□□□ -1.97
NMD2YHR077C VID22Q05934 901 aa2.75□□□□□ -1.97
NMD2YHR077C RGC1Q06108 1083 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C NMA1Q06178 401 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C TAZ1Q06510 381 aa2.75□□□□□ -1.97
NMD2YHR077C NOP12Q08208 459 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C TIR4Q12218 487 aaPredicted RBP2.75□□□□□ -1.97
NMD2YHR077C GLO4Q12320 285 aa2.75□□□□□ -1.97
NMD2YHR077C HSP42Q12329 375 aa2.75□□□□□ -1.97
NMD2YHR077C MDM35O60200 86 aa2.75□□□□□ -1.97
NMD2YHR077C NHP6BP11633 99 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C PRP28P23394 588 aa2.75□□□□□ -1.97
NMD2YHR077C FPS1P23900 669 aa2.75□□□□□ -1.97
NMD2YHR077C HSP30P25619 332 aa2.75□□□□□ -1.97
NMD2YHR077C ERG24P32462 438 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C ECT1P33412 323 aa2.75□□□□□ -1.97
NMD2YHR077C BAT1P38891 393 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C HRB1P38922 454 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
NMD2YHR077C UTP25P40498 721 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C LSM7P53905 115 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C ATG38Q05789 226 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C CYK3Q07533 885 aa2.75□□□□□ -1.97
NMD2YHR077C YDL177CQ12257 170 aa2.75□□□□□ -1.97
NMD2YHR077C YDR061WQ12298 539 aa2.75□□□□□ -1.97
NMD2YHR077C YBL029C-AQ3E756 94 aa2.75□□□□□ -1.97
NMD2YHR077C YIL046W-AQ3E7Z4 54 aa2.75□□□□□ -1.97
NMD2YHR077C BEM2P39960 2167 aaKnown RBP2.75□□□□□ -1.97
NMD2YHR077C CDC9P04819 755 aa2.74□□□□□ -1.97
NMD2YHR077C CKS1P20486 150 aaKnown RBP2.74□□□□□ -1.97
NMD2YHR077C DBF2P22204 572 aa2.74□□□□□ -1.97
NMD2YHR077C TOD6P34219 525 aa2.74□□□□□ -1.97
NMD2YHR077C SOH1P38633 127 aa2.74□□□□□ -1.97
NMD2YHR077C RPE1P46969 238 aa2.74□□□□□ -1.97
NMD2YHR077C IBA57P47158 497 aa2.74□□□□□ -1.97
NMD2YHR077C LYS20P48570 428 aaKnown RBP2.74□□□□□ -1.97
NMD2YHR077C MNN10P50108 393 aaKnown RBP2.74□□□□□ -1.97
NMD2YHR077C FMP48P53233 369 aa2.74□□□□□ -1.97
NMD2YHR077C SWS2P53937 143 aa2.74□□□□□ -1.97
NMD2YHR077C STP3Q05937 343 aa2.74□□□□□ -1.97
NMD2YHR077C IRC13Q08630 104 aa2.74□□□□□ -1.97
NMD2YHR077C LYS21Q12122 440 aaKnown RBP2.74□□□□□ -1.97
NMD2YHR077C RKM5Q12367 367 aa2.74□□□□□ -1.97
NMD2YHR077C FLP1P03870 423 aa2.74□□□□□ -1.97
NMD2YHR077C APN1P22936 367 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms