RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W ECM31P38122 312 aa3.94□□□□□ -1.78
LSB1YGR136W IML3P38265 245 aa3.94□□□□□ -1.78
LSB1YGR136W BMT2P38278 337 aa3.94□□□□□ -1.78
LSB1YGR136W PFS1P38872 237 aa3.94□□□□□ -1.78
LSB1YGR136W TIM17P39515 158 aa3.94□□□□□ -1.78
LSB1YGR136W YGR210CP42942 411 aa3.94□□□□□ -1.78
LSB1YGR136W FET5P43561 622 aa3.94□□□□□ -1.78
LSB1YGR136W GAT1P43574 510 aa3.94□□□□□ -1.78
LSB1YGR136W TIS11P47977 285 aa3.94□□□□□ -1.78
LSB1YGR136W DIE2P50076 525 aa3.94□□□□□ -1.78
LSB1YGR136W YPT32P51996 222 aaKnown RBP3.94□□□□□ -1.78
LSB1YGR136W YNL260CP53846 198 aa3.94□□□□□ -1.78
LSB1YGR136W DID2P69771 204 aa3.94□□□□□ -1.78
LSB1YGR136W IRC15Q02733 499 aa3.94□□□□□ -1.78
LSB1YGR136W SKI8Q02793 397 aaPredicted RBP3.94□□□□□ -1.78
LSB1YGR136W TY2A-DR2Q03483 438 aa3.94□□□□□ -1.78
LSB1YGR136W ARX1Q03862 593 aaKnown RBP3.94□□□□□ -1.78
LSB1YGR136W EMI1Q04406 187 aa3.94□□□□□ -1.78
LSB1YGR136W YDR124WQ04608 324 aa3.94□□□□□ -1.78
LSB1YGR136W FMP45Q07651 309 aa3.94□□□□□ -1.78
LSB1YGR136W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
LSB1YGR136W YLR040CQ07988 224 aa3.94□□□□□ -1.78
LSB1YGR136W CRT10Q08226 957 aa3.94□□□□□ -1.78
LSB1YGR136W SLF1Q12034 447 aaKnown RBP3.94□□□□□ -1.78
LSB1YGR136W SMF3Q12078 473 aaPredicted RBP3.94□□□□□ -1.78
LSB1YGR136W RTC5Q12108 567 aaKnown RBP3.94□□□□□ -1.78
LSB1YGR136W YOR342CQ12182 319 aa3.94□□□□□ -1.78
LSB1YGR136W TY2A-BQ12260 438 aa3.94□□□□□ -1.78
LSB1YGR136W TY2A-OR2Q12293 438 aa3.94□□□□□ -1.78
LSB1YGR136W PSY3Q12318 242 aa3.94□□□□□ -1.78
LSB1YGR136W JLP1Q12358 412 aa3.94□□□□□ -1.78
LSB1YGR136W TY2A-DR1Q12392 438 aa3.94□□□□□ -1.78
LSB1YGR136W TY2A-OR1Q12439 438 aa3.94□□□□□ -1.78
LSB1YGR136W FMP16Q12497 93 aa3.94□□□□□ -1.78
LSB1YGR136W YIL002W-AQ3E7Z5 69 aa3.94□□□□□ -1.78
LSB1YGR136W YBR298C-AQ8TGK4 73 aa3.94□□□□□ -1.78
LSB1YGR136W TY2A-DR3Q99303 438 aa3.94□□□□□ -1.78
LSB1YGR136W HFA1P32874 2273 aa3.93□□□□□ -1.78
LSB1YGR136W CDC21P06785 304 aa3.93□□□□□ -1.78
LSB1YGR136W NFT1P0CE68 1218 aa3.93□□□□□ -1.78
LSB1YGR136W RAP1P11938 827 aa3.93□□□□□ -1.78
LSB1YGR136W UGA1P17649 471 aa3.93□□□□□ -1.78
LSB1YGR136W DBF2P22204 572 aa3.93□□□□□ -1.78
LSB1YGR136W HXT2P23585 541 aa3.93□□□□□ -1.78
LSB1YGR136W DMC1P25453 334 aa3.93□□□□□ -1.78
LSB1YGR136W CNE1P27825 502 aa3.93□□□□□ -1.78
LSB1YGR136W NUP2P32499 720 aa3.93□□□□□ -1.78
LSB1YGR136W CDC5P32562 705 aa3.93□□□□□ -1.78
LSB1YGR136W SSE2P32590 693 aaKnown RBP3.93□□□□□ -1.78
LSB1YGR136W UGP1P32861 499 aaKnown RBP3.93□□□□□ -1.78
LSB1YGR136W SDH3P33421 198 aa3.93□□□□□ -1.78
LSB1YGR136W CPR5P35176 225 aa3.93□□□□□ -1.78
LSB1YGR136W MIA40P36046 403 aa3.93□□□□□ -1.78
LSB1YGR136W GMH1P36125 273 aa3.93□□□□□ -1.78
LSB1YGR136W SKG1P36169 355 aa3.93□□□□□ -1.78
LSB1YGR136W GRE3P38715 327 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
LSB1YGR136W WSC4P38739 605 aa3.93□□□□□ -1.78
LSB1YGR136W RRF1P38771 230 aa3.93□□□□□ -1.78
LSB1YGR136W ATG7P38862 630 aa3.93□□□□□ -1.78
LSB1YGR136W LNP1P38878 278 aa3.93□□□□□ -1.78
LSB1YGR136W YHR218WP38899 603 aa3.93□□□□□ -1.78
LSB1YGR136W FAD1P38913 306 aa3.93□□□□□ -1.78
LSB1YGR136W MNN9P39107 395 aaKnown RBP3.93□□□□□ -1.78
LSB1YGR136W YEL068CP39977 110 aa3.93□□□□□ -1.78
LSB1YGR136W ECM10P39987 644 aa3.93□□□□□ -1.78
LSB1YGR136W JLP2P40206 208 aa3.93□□□□□ -1.78
LSB1YGR136W LTP1P40347 161 aa3.93□□□□□ -1.78
LSB1YGR136W LAS21P40367 830 aa3.93□□□□□ -1.78
LSB1YGR136W MEP2P41948 499 aa3.93□□□□□ -1.78
LSB1YGR136W AGP3P43548 558 aa3.93□□□□□ -1.78
LSB1YGR136W YJR149WP47177 404 aa3.93□□□□□ -1.78
LSB1YGR136W BPL1P48445 690 aaPredicted RBP3.93□□□□□ -1.78
LSB1YGR136W TOM22P49334 152 aa3.93□□□□□ -1.78
LSB1YGR136W OCA1P50946 238 aaPredicted RBP3.93□□□□□ -1.78
LSB1YGR136W MDM34P53083 459 aa3.93□□□□□ -1.78
LSB1YGR136W CGR1P53188 120 aa3.93□□□□□ -1.78
LSB1YGR136W SNF12P53628 566 aa3.93□□□□□ -1.78
LSB1YGR136W DBP6P53734 629 aaKnown RBP3.93□□□□□ -1.78
LSB1YGR136W SWS2P53937 143 aa3.93□□□□□ -1.78
LSB1YGR136W SMX3P54999 86 aaPredicted RBP3.93□□□□□ -1.78
LSB1YGR136W RPL6AQ02326 176 aaKnown RBP3.93□□□□□ -1.78
LSB1YGR136W SNZ1Q03148 297 aa3.93□□□□□ -1.78
LSB1YGR136W NGL2Q03264 515 aaKnown RBP3.93□□□□□ -1.78
LSB1YGR136W TRM82Q03774 444 aa3.93□□□□□ -1.78
LSB1YGR136W VHS1Q03785 461 aa3.93□□□□□ -1.78
LSB1YGR136W PEX12Q04370 399 aa3.93□□□□□ -1.78
LSB1YGR136W YHC1Q05900 231 aaKnown RBP3.93□□□□□ -1.78
LSB1YGR136W RAD34Q06665 692 aa3.93□□□□□ -1.78
LSB1YGR136W YOL073CQ08232 322 aa3.93□□□□□ -1.78
LSB1YGR136W THP3Q12049 470 aaKnown RBP3.93□□□□□ -1.78
LSB1YGR136W SWT1Q12104 458 aa3.93□□□□□ -1.78
LSB1YGR136W USV1Q12132 391 aa3.93□□□□□ -1.78
LSB1YGR136W YRM1Q12340 786 aa3.93□□□□□ -1.78
LSB1YGR136W RPN6Q12377 434 aa3.93□□□□□ -1.78
LSB1YGR136W TRM13Q12383 476 aa3.93□□□□□ -1.78
LSB1YGR136W ATG31Q12421 196 aa3.93□□□□□ -1.78
LSB1YGR136W SRN2Q99176 213 aa3.93□□□□□ -1.78
LSB1YGR136W BRR2P32639 2163 aaKnown RBP3.93□□□□□ -1.78
LSB1YGR136W AAC1P04710 309 aa3.92□□□□□ -1.78
LSB1YGR136W ARG81P05085 880 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms