RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W TYR1P20049 452 aa3.29□□□□□ -1.88
CAF130YGR134W KIN3P22209 435 aa3.29□□□□□ -1.88
CAF130YGR134W MRPL6P32904 214 aa3.29□□□□□ -1.88
CAF130YGR134W FAU1P40099 211 aa3.29□□□□□ -1.88
CAF130YGR134W YML053CQ04978 212 aa3.29□□□□□ -1.88
CAF130YGR134W MRPL35Q06678 367 aa3.29□□□□□ -1.88
CAF130YGR134W RAD50P12753 1312 aa3.29□□□□□ -1.88
CAF130YGR134W ERG11P10614 530 aa3.28□□□□□ -1.88
CAF130YGR134W YCR102CP25608 368 aa3.28□□□□□ -1.88
CAF130YGR134W CBT1P36038 271 aaPredicted RBP3.28□□□□□ -1.88
CAF130YGR134W SHO1P40073 367 aa3.28□□□□□ -1.88
CAF130YGR134W YIL060WP40519 144 aa3.28□□□□□ -1.88
CAF130YGR134W AGP3P43548 558 aa3.28□□□□□ -1.88
CAF130YGR134W CCE1Q03702 353 aa3.28□□□□□ -1.88
CAF130YGR134W YMR114CQ04471 368 aaKnown RBP3.28□□□□□ -1.88
CAF130YGR134W YDL057WQ07379 328 aa3.28□□□□□ -1.88
CAF130YGR134W IRC10Q08118 586 aa3.28□□□□□ -1.88
CAF130YGR134W THP1Q08231 455 aa3.28□□□□□ -1.88
CAF130YGR134W SNF3P10870 884 aa3.28□□□□□ -1.88
CAF130YGR134W SSO1P32867 290 aa3.28□□□□□ -1.88
CAF130YGR134W SUR2P38992 349 aa3.28□□□□□ -1.88
CAF130YGR134W EXO1P39875 702 aa3.28□□□□□ -1.88
CAF130YGR134W RHO4Q00246 291 aa3.28□□□□□ -1.88
CAF130YGR134W FAR8Q05040 523 aa3.28□□□□□ -1.88
CAF130YGR134W YOR338WQ99326 363 aa3.28□□□□□ -1.88
CAF130YGR134W ROM2P51862 1356 aaKnown RBP3.28□□□□□ -1.88
CAF130YGR134W BAR1P12630 587 aa3.28□□□□□ -1.89
CAF130YGR134W URA6P15700 204 aa3.28□□□□□ -1.89
CAF130YGR134W COQ3P27680 312 aa3.28□□□□□ -1.89
CAF130YGR134W FUN19P28003 413 aaPredicted RBP3.28□□□□□ -1.89
CAF130YGR134W MAL32P38158 584 aa3.28□□□□□ -1.89
CAF130YGR134W YAT2P40017 923 aa3.28□□□□□ -1.89
CAF130YGR134W ICE2P40499 491 aa3.28□□□□□ -1.89
CAF130YGR134W SLX9P53251 210 aaPredicted RBP3.28□□□□□ -1.89
CAF130YGR134W GTF1P53260 183 aaPredicted RBP3.28□□□□□ -1.89
CAF130YGR134W MAL12P53341 584 aa3.28□□□□□ -1.89
CAF130YGR134W GCN5Q03330 439 aa3.28□□□□□ -1.89
CAF130YGR134W BNA7Q04066 261 aa3.28□□□□□ -1.89
CAF130YGR134W PEX27Q08580 376 aa3.28□□□□□ -1.89
CAF130YGR134W VIK1Q12045 647 aa3.28□□□□□ -1.89
CAF130YGR134W SIA1Q12212 622 aa3.28□□□□□ -1.89
CAF130YGR134W DET1Q99288 334 aaKnown RBP3.28□□□□□ -1.89
CAF130YGR134W MATALPHA2P0CY08 210 aa3.27□□□□□ -1.89
CAF130YGR134W HMLALPHA2P0CY09 210 aa3.27□□□□□ -1.89
CAF130YGR134W SAC1P32368 623 aaKnown RBP3.27□□□□□ -1.89
CAF130YGR134W NTF2P33331 125 aaKnown RBP3.27□□□□□ -1.89
CAF130YGR134W AME1P38313 324 aa3.27□□□□□ -1.89
CAF130YGR134W POG1P40473 351 aa3.27□□□□□ -1.89
CAF130YGR134W YJR149WP47177 404 aa3.27□□□□□ -1.89
CAF130YGR134W ROT1Q03691 256 aa3.27□□□□□ -1.89
CAF130YGR134W SRL2Q12020 392 aa3.27□□□□□ -1.89
CAF130YGR134W TAF10Q12030 206 aa3.27□□□□□ -1.89
CAF130YGR134W USV1Q12132 391 aa3.27□□□□□ -1.89
CAF130YGR134W ORT1Q12375 292 aa3.27□□□□□ -1.89
CAF130YGR134W AMD1P15274 810 aaKnown RBP3.27□□□□□ -1.89
CAF130YGR134W GIT1P25346 518 aa3.27□□□□□ -1.89
CAF130YGR134W PPA2P28239 310 aa3.27□□□□□ -1.89
CAF130YGR134W UTR4P32626 227 aa3.27□□□□□ -1.89
CAF130YGR134W ECM15P35195 104 aa3.27□□□□□ -1.89
CAF130YGR134W YMC2P38087 329 aa3.27□□□□□ -1.89
CAF130YGR134W RFT1P38206 574 aaPredicted RBP3.27□□□□□ -1.89
CAF130YGR134W MIC12P38341 106 aa3.27□□□□□ -1.89
CAF130YGR134W BDH2P39713 417 aa3.27□□□□□ -1.89
CAF130YGR134W MGA1P53050 456 aa3.27□□□□□ -1.89
CAF130YGR134W NMA2P53204 395 aa3.27□□□□□ -1.89
CAF130YGR134W SYF2P53277 215 aaPredicted RBP3.27□□□□□ -1.89
CAF130YGR134W CTF19Q02732 369 aa3.27□□□□□ -1.89
CAF130YGR134W RVB1Q03940 463 aaKnown RBP3.27□□□□□ -1.89
CAF130YGR134W YLR224WQ05947 369 aa3.27□□□□□ -1.89
CAF130YGR134W YDL086WQ07505 273 aa3.27□□□□□ -1.89
CAF130YGR134W SSK22P25390 1331 aaPredicted RBP3.26□□□□□ -1.89
CAF130YGR134W SPO12P17123 173 aa3.26□□□□□ -1.89
CAF130YGR134W CYS4P32582 507 aaKnown RBP3.26□□□□□ -1.89
CAF130YGR134W DTR1P38125 572 aa3.26□□□□□ -1.89
CAF130YGR134W MRPL49P40858 161 aaPredicted RBP3.26□□□□□ -1.89
CAF130YGR134W IMD3P50095 523 aaKnown RBP3.26□□□□□ -1.89
CAF130YGR134W SEC10Q06245 871 aa3.26□□□□□ -1.89
CAF130YGR134W LDS2Q08218 356 aa3.26□□□□□ -1.89
CAF130YGR134W SKI7Q08491 747 aaPredicted RBP3.26□□□□□ -1.89
CAF130YGR134W YDR215CQ12240 137 aa3.26□□□□□ -1.89
CAF130YGR134W YLR122CQ12312 125 aa3.26□□□□□ -1.89
CAF130YGR134W PAB1P04147 577 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
CAF130YGR134W YNL194CP40169 301 aa3.26□□□□□ -1.89
CAF130YGR134W LYS12P40495 371 aaKnown RBP3.26□□□□□ -1.89
CAF130YGR134W YJR079WP47126 109 aa3.26□□□□□ -1.89
CAF130YGR134W NBP35P52920 328 aa3.26□□□□□ -1.89
CAF130YGR134W VAC7P53950 1165 aa3.26□□□□□ -1.89
CAF130YGR134W CSM3Q04659 317 aa3.26□□□□□ -1.89
CAF130YGR134W CDD1Q06549 142 aa3.26□□□□□ -1.89
CAF130YGR134W ESA1Q08649 445 aa3.26□□□□□ -1.89
CAF130YGR134W YPL199CQ08954 240 aa3.26□□□□□ -1.89
CAF130YGR134W RGT2Q12300 763 aa3.26□□□□□ -1.89
CAF130YGR134W YMR31P19955 123 aa3.26□□□□□ -1.89
CAF130YGR134W RAD57P25301 460 aa3.26□□□□□ -1.89
CAF130YGR134W SAT4P25333 603 aaKnown RBP3.26□□□□□ -1.89
CAF130YGR134W DCC1P25559 380 aa3.26□□□□□ -1.89
CAF130YGR134W MKK1P32490 508 aa3.26□□□□□ -1.89
CAF130YGR134W ICS2P38284 255 aa3.26□□□□□ -1.89
CAF130YGR134W NBP1P52919 319 aaPredicted RBP3.26□□□□□ -1.89
CAF130YGR134W LST7P53237 242 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms