RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YGK3Q12222 375 aaPredicted RBP5.61□□□□□ -1.51
LCP5YER127W YDR034W-BQ6Q5X2 51 aa5.61□□□□□ -1.51
LCP5YER127W ADH2P00331 348 aaKnown RBP5.6□□□□□ -1.51
LCP5YER127W PSO2P30620 661 aa5.6□□□□□ -1.51
LCP5YER127W SPT10P35208 640 aa5.6□□□□□ -1.51
LCP5YER127W TVP23P38962 199 aa5.6□□□□□ -1.51
LCP5YER127W SNL1P40548 159 aa5.6□□□□□ -1.51
LCP5YER127W CUE3P53137 624 aaKnown RBP5.6□□□□□ -1.51
LCP5YER127W AQR1P53943 586 aa5.6□□□□□ -1.51
LCP5YER127W NOP6Q07623 225 aaKnown RBP5.6□□□□□ -1.51
LCP5YER127W IRC25Q07951 179 aa5.6□□□□□ -1.51
LCP5YER127W RRG7Q08774 242 aaPredicted RBP5.6□□□□□ -1.51
LCP5YER127W YCR024C-BQ3E7Z8 88 aa5.6□□□□□ -1.51
LCP5YER127W UBR2Q07963 1872 aa5.6□□□□□ -1.51
LCP5YER127W TIR2P33890 251 aa5.59□□□□□ -1.51
LCP5YER127W BMH2P34730 273 aaKnown RBP5.59□□□□□ -1.51
LCP5YER127W MRPL10P36520 322 aa5.59□□□□□ -1.51
LCP5YER127W SWD3P38123 315 aa5.59□□□□□ -1.51
LCP5YER127W RPA34P47006 233 aaPredicted RBP5.59□□□□□ -1.51
LCP5YER127W YNL143CP53908 130 aa5.59□□□□□ -1.51
LCP5YER127W YNL134CP53912 376 aaKnown RBP5.59□□□□□ -1.51
LCP5YER127W TDA1Q03533 586 aa5.59□□□□□ -1.51
LCP5YER127W PGC1Q08959 321 aa5.59□□□□□ -1.51
LCP5YER127W TOA2P32774 122 aa5.58□□□□□ -1.52
LCP5YER127W RAD5P32849 1169 aaPredicted RBP5.58□□□□□ -1.52
LCP5YER127W DRE2P36152 348 aa5.58□□□□□ -1.52
LCP5YER127W ECM8P38246 354 aa5.58□□□□□ -1.52
LCP5YER127W YHK8P38776 514 aa5.58□□□□□ -1.52
LCP5YER127W ARP5P53946 755 aa5.58□□□□□ -1.52
LCP5YER127W UTP6Q02354 440 aaKnown RBP5.58□□□□□ -1.52
LCP5YER127W PRM6Q04705 352 aa5.58□□□□□ -1.52
LCP5YER127W RTN1Q04947 295 aaKnown RBP5.58□□□□□ -1.52
LCP5YER127W PML1Q07930 204 aaPredicted RBP5.58□□□□□ -1.52
LCP5YER127W HTZ1Q12692 134 aaKnown RBP5.58□□□□□ -1.52
LCP5YER127W MSI1P13712 422 aa5.57□□□□□ -1.52
LCP5YER127W SLX1P38324 304 aa5.57□□□□□ -1.52
LCP5YER127W MPS2P53159 387 aa5.57□□□□□ -1.52
LCP5YER127W RIF2Q06208 395 aa5.57□□□□□ -1.52
LCP5YER127W SMD2Q06217 110 aaKnown RBP5.57□□□□□ -1.52
LCP5YER127W MOT1P32333 1867 aa5.57□□□□□ -1.52
LCP5YER127W STE3P06783 470 aa5.56□□□□□ -1.52
LCP5YER127W RDS1P25611 832 aa5.56□□□□□ -1.52
LCP5YER127W MSK1P32048 576 aa5.56□□□□□ -1.52
LCP5YER127W YFR057WP43625 151 aa5.56□□□□□ -1.52
LCP5YER127W RET3P53600 189 aa5.56□□□□□ -1.52
LCP5YER127W PAL1Q05518 499 aaKnown RBP5.56□□□□□ -1.52
LCP5YER127W HRT3Q12347 344 aa5.56□□□□□ -1.52
LCP5YER127W IZH2Q12442 317 aa5.56□□□□□ -1.52
LCP5YER127W NBL1Q3E7Y6 73 aa5.56□□□□□ -1.52
LCP5YER127W ILV1P00927 576 aaKnown RBP5.55□□□□□ -1.52
LCP5YER127W THR4P16120 514 aaKnown RBP5.55□□□□□ -1.52
LCP5YER127W RVS161P25343 265 aaKnown RBP5.55□□□□□ -1.52
LCP5YER127W FDH1Q08911 376 aa5.55□□□□□ -1.52
LCP5YER127W PSY3Q12318 242 aa5.55□□□□□ -1.52
LCP5YER127W YOR012WQ12351 137 aa5.55□□□□□ -1.52
LCP5YER127W SFG1Q12507 346 aa5.55□□□□□ -1.52
LCP5YER127W YOR338WQ99326 363 aa5.55□□□□□ -1.52
LCP5YER127W YEL045CP32616 141 aa5.54□□□□□ -1.52
LCP5YER127W YHL026CP38740 315 aa5.54□□□□□ -1.52
LCP5YER127W LYS12P40495 371 aaKnown RBP5.54□□□□□ -1.52
LCP5YER127W BIR1P47134 954 aa5.54□□□□□ -1.52
LCP5YER127W ABM1P47146 123 aa5.54□□□□□ -1.52
LCP5YER127W MST27P53176 234 aa5.54□□□□□ -1.52
LCP5YER127W RTC4P53850 401 aa5.54□□□□□ -1.52
LCP5YER127W GLE1Q12315 538 aa5.54□□□□□ -1.52
LCP5YER127W MATALPHA2P0CY08 210 aa5.53□□□□□ -1.52
LCP5YER127W HMLALPHA2P0CY09 210 aa5.53□□□□□ -1.52
LCP5YER127W TRX1P22217 103 aaKnown RBP5.53□□□□□ -1.52
LCP5YER127W MRPL8P22353 238 aa5.53□□□□□ -1.52
LCP5YER127W DBR1P24309 405 aaKnown RBP5.53□□□□□ -1.52
LCP5YER127W SKG6P32900 734 aaPredicted RBP5.53□□□□□ -1.52
LCP5YER127W FIS1P40515 155 aa5.53□□□□□ -1.52
LCP5YER127W SEC27P41811 889 aaKnown RBP5.53□□□□□ -1.52
LCP5YER127W AIM33Q04516 312 aa5.53□□□□□ -1.52
LCP5YER127W YMR310CQ04867 317 aaPredicted RBP5.53□□□□□ -1.52
LCP5YER127W YLH47Q06493 454 aa5.53□□□□□ -1.52
LCP5YER127W YPR091CQ06833 770 aa5.53□□□□□ -1.52
LCP5YER127W FCY22Q12119 530 aa5.53□□□□□ -1.52
LCP5YER127W JID1Q12350 301 aa5.53□□□□□ -1.52
LCP5YER127W FKS1P38631 1876 aaKnown RBP5.53□□□□□ -1.52
LCP5YER127W TCP1P12612 559 aaKnown RBP5.52□□□□□ -1.53
LCP5YER127W TAL1P15019 335 aaKnown RBP5.52□□□□□ -1.53
LCP5YER127W YEL043WP32618 956 aa5.52□□□□□ -1.53
LCP5YER127W MOB1P40484 314 aa5.52□□□□□ -1.53
LCP5YER127W PRM1P53835 661 aa5.52□□□□□ -1.53
LCP5YER127W MEX67Q99257 599 aaKnown RBP5.52□□□□□ -1.53
LCP5YER127W FSH3Q99369 266 aa5.52□□□□□ -1.53
LCP5YER127W MAS1P10507 462 aa5.51□□□□□ -1.53
LCP5YER127W RPB5P20434 215 aa5.51□□□□□ -1.53
LCP5YER127W SAG1P20840 650 aa5.51□□□□□ -1.53
LCP5YER127W GAA1P39012 614 aa5.51□□□□□ -1.53
LCP5YER127W AIM10P39965 576 aaKnown RBP5.51□□□□□ -1.53
LCP5YER127W YNL208WP40159 199 aaKnown RBP5.51□□□□□ -1.53
LCP5YER127W EGT2P42835 1041 aa5.51□□□□□ -1.53
LCP5YER127W EFM3P47163 339 aa5.51□□□□□ -1.53
LCP5YER127W SHE10P53075 577 aa5.51□□□□□ -1.53
LCP5YER127W CRH1P53301 507 aa5.51□□□□□ -1.53
LCP5YER127W GIS2P53849 153 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53 RIP-Chip
LCP5YER127W SHS1Q07657 551 aa5.51□□□□□ -1.53
LCP5YER127W WTM1Q12363 437 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms