RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C FUR4P05316 633 aaKnown RBP5.28□□□□□ -1.56
SEC20YDR498C RPL1AP0CX43 217 aaKnown RBP5.28□□□□□ -1.56
SEC20YDR498C RPL1BP0CX44 217 aaKnown RBP5.28□□□□□ -1.56
SEC20YDR498C PUP2P32379 260 aa5.28□□□□□ -1.56
SEC20YDR498C SRB5P32585 307 aa5.28□□□□□ -1.56
SEC20YDR498C OAR1P35731 278 aa5.28□□□□□ -1.56
SEC20YDR498C SRL3P36167 246 aa5.28□□□□□ -1.56
SEC20YDR498C FES1P38260 290 aa5.28□□□□□ -1.56
SEC20YDR498C CFD1P40558 293 aa5.28□□□□□ -1.56
SEC20YDR498C CHA4P43634 648 aa5.28□□□□□ -1.56
SEC20YDR498C HOC1P47124 396 aa5.28□□□□□ -1.56
SEC20YDR498C IBA57P47158 497 aa5.28□□□□□ -1.56
SEC20YDR498C BAT2P47176 376 aaKnown RBP5.28□□□□□ -1.56
SEC20YDR498C COS1P53822 381 aa5.28□□□□□ -1.56
SEC20YDR498C SNZ1Q03148 297 aa5.28□□□□□ -1.56
SEC20YDR498C YML053CQ04978 212 aa5.28□□□□□ -1.56
SEC20YDR498C YLR173WQ06247 608 aa5.28□□□□□ -1.56
SEC20YDR498C FDH1Q08911 376 aa5.28□□□□□ -1.56
SEC20YDR498C LEU9Q12166 604 aaKnown RBP5.28□□□□□ -1.56
SEC20YDR498C YGR161W-CQ3E744 92 aa5.28□□□□□ -1.56
SEC20YDR498C LAG2Q92325 660 aa5.28□□□□□ -1.56
SEC20YDR498C IRA1P18963 3092 aa5.28□□□□□ -1.56
SEC20YDR498C TOR2P32600 2474 aaKnown RBP5.28□□□□□ -1.56
SEC20YDR498C SNF5P18480 905 aa5.27□□□□□ -1.57
SEC20YDR498C SNF6P18888 332 aa5.27□□□□□ -1.57
SEC20YDR498C YCL002CP25565 263 aa5.27□□□□□ -1.57
SEC20YDR498C HIR2P32480 875 aa5.27□□□□□ -1.57
SEC20YDR498C MCM7P38132 845 aa5.27□□□□□ -1.57
SEC20YDR498C RPP1P38786 293 aa5.27□□□□□ -1.57
SEC20YDR498C RRP4P38792 359 aaKnown RBP5.27□□□□□ -1.57
SEC20YDR498C NTA1P40354 457 aa5.27□□□□□ -1.57
SEC20YDR498C SMK1P41808 388 aa5.27□□□□□ -1.57
SEC20YDR498C POP1P41812 875 aa5.27□□□□□ -1.57
SEC20YDR498C YJL055WP47044 245 aa5.27□□□□□ -1.57
SEC20YDR498C BUD9P53226 547 aa5.27□□□□□ -1.57
SEC20YDR498C YGR250CP53316 781 aaKnown RBP5.27□□□□□ -1.57
SEC20YDR498C MPA43P53583 542 aaPredicted RBP5.27□□□□□ -1.57
SEC20YDR498C ERG13P54839 491 aaKnown RBP5.27□□□□□ -1.57
SEC20YDR498C SMA2Q04658 369 aa5.27□□□□□ -1.57
SEC20YDR498C RKM1Q08961 583 aaPredicted RBP5.27□□□□□ -1.57
SEC20YDR498C THP3Q12049 470 aaKnown RBP5.27□□□□□ -1.57
SEC20YDR498C TPO4Q12256 659 aa5.27□□□□□ -1.57
SEC20YDR498C HOP1P20050 605 aa5.26□□□□□ -1.57
SEC20YDR498C APN1P22936 367 aa5.26□□□□□ -1.57
SEC20YDR498C CDC12P32468 407 aaKnown RBP5.26□□□□□ -1.57
SEC20YDR498C ECM15P35195 104 aa5.26□□□□□ -1.57
SEC20YDR498C SHE1P38200 338 aa5.26□□□□□ -1.57
SEC20YDR498C FMP23P38231 175 aa5.26□□□□□ -1.57
SEC20YDR498C YBR238CP38330 731 aaKnown RBP5.26□□□□□ -1.57
SEC20YDR498C TRR2P38816 342 aa5.26□□□□□ -1.57
SEC20YDR498C PTH1P38876 190 aaKnown RBP5.26□□□□□ -1.57
SEC20YDR498C FCY21P40039 528 aa5.26□□□□□ -1.57
SEC20YDR498C DDI1P40087 428 aa5.26□□□□□ -1.57
SEC20YDR498C IRC6P43615 237 aa5.26□□□□□ -1.57
SEC20YDR498C AAD10P47182 288 aa5.26□□□□□ -1.57
SEC20YDR498C IMD3P50095 523 aaKnown RBP5.26□□□□□ -1.57
SEC20YDR498C SKP1P52286 194 aa5.26□□□□□ -1.57
SEC20YDR498C NQM1P53228 333 aaPredicted RBP5.26□□□□□ -1.57
SEC20YDR498C BUD17P53727 317 aa5.26□□□□□ -1.57
SEC20YDR498C PGA1P53896 198 aa5.26□□□□□ -1.57
SEC20YDR498C TY1A-DR2Q03964 440 aaKnown RBP5.26□□□□□ -1.57
SEC20YDR498C VID22Q05934 901 aa5.26□□□□□ -1.57
SEC20YDR498C YPR174CQ06616 221 aaPredicted RBP5.26□□□□□ -1.57
SEC20YDR498C GIC2Q06648 383 aa5.26□□□□□ -1.57
SEC20YDR498C MRPL35Q06678 367 aa5.26□□□□□ -1.57
SEC20YDR498C PEX27Q08580 376 aa5.26□□□□□ -1.57
SEC20YDR498C NPC2Q12408 173 aa5.26□□□□□ -1.57
SEC20YDR498C DPM1P14020 267 aaKnown RBP5.25□□□□□ -1.57
SEC20YDR498C NAR1P23503 491 aaKnown RBP5.25□□□□□ -1.57
SEC20YDR498C BUD23P25627 275 aaPredicted RBP5.25□□□□□ -1.57
SEC20YDR498C CMK1P27466 446 aaKnown RBP5.25□□□□□ -1.57
SEC20YDR498C SPT14P32363 452 aa5.25□□□□□ -1.57
SEC20YDR498C ORC2P32833 620 aa5.25□□□□□ -1.57
SEC20YDR498C TOD6P34219 525 aa5.25□□□□□ -1.57
SEC20YDR498C YOR062CP36025 268 aa5.25□□□□□ -1.57
SEC20YDR498C RCN1P36054 211 aa5.25□□□□□ -1.57
SEC20YDR498C MDM31P38880 579 aa5.25□□□□□ -1.57
SEC20YDR498C PRP39P39682 629 aaKnown RBP5.25□□□□□ -1.57
SEC20YDR498C BOL3P39724 118 aa5.25□□□□□ -1.57
SEC20YDR498C VPS52P39904 641 aa5.25□□□□□ -1.57
SEC20YDR498C MIT1P40002 666 aa5.25□□□□□ -1.57
SEC20YDR498C YIL086CP40503 102 aa5.25□□□□□ -1.57
SEC20YDR498C CIN1P40987 1014 aa5.25□□□□□ -1.57
SEC20YDR498C RPS12P48589 143 aaKnown RBP5.25□□□□□ -1.57
SEC20YDR498C SUT1P53032 299 aaKnown RBP5.25□□□□□ -1.57
SEC20YDR498C YGL235WP53071 178 aa5.25□□□□□ -1.57
SEC20YDR498C LSG1P53145 640 aaKnown RBP5.25□□□□□ -1.57
SEC20YDR498C IMO32P53219 342 aa5.25□□□□□ -1.57
SEC20YDR498C YKR011CQ02209 353 aa5.25□□□□□ -1.57
SEC20YDR498C FDC1Q03034 503 aa5.25□□□□□ -1.57
SEC20YDR498C MSS11Q03825 758 aa5.25□□□□□ -1.57
SEC20YDR498C FIN1Q03898 291 aa5.25□□□□□ -1.57
SEC20YDR498C HLR1Q04429 423 aa5.25□□□□□ -1.57
SEC20YDR498C SEC13Q04491 297 aaKnown RBP5.25□□□□□ -1.57
SEC20YDR498C YPR091CQ06833 770 aa5.25□□□□□ -1.57
SEC20YDR498C CYK3Q07533 885 aa5.25□□□□□ -1.57
SEC20YDR498C YLR040CQ07988 224 aa5.25□□□□□ -1.57
SEC20YDR498C YOR365CQ08844 703 aa5.25□□□□□ -1.57
SEC20YDR498C UIP4Q08926 304 aa5.25□□□□□ -1.57
SEC20YDR498C YOR289WQ12012 251 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms