RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W SEA4P38164 1038 aa1.56□□□□□ -2.16
CFT1YDR301W TDP1P38319 544 aa1.56□□□□□ -2.16
CFT1YDR301W VPS52P39904 641 aa1.56□□□□□ -2.16
CFT1YDR301W ARB1P40024 610 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W BUR6P40096 142 aa1.56□□□□□ -2.16
CFT1YDR301W HIS6P40545 261 aa1.56□□□□□ -2.16
CFT1YDR301W PAC11P40960 533 aa1.56□□□□□ -2.16
CFT1YDR301W POP1P41812 875 aa1.56□□□□□ -2.16
CFT1YDR301W BNA2P47125 453 aa1.56□□□□□ -2.16
CFT1YDR301W IBA57P47158 497 aa1.56□□□□□ -2.16
CFT1YDR301W MRK1P50873 501 aa1.56□□□□□ -2.16
CFT1YDR301W SPT20P50875 604 aa1.56□□□□□ -2.16
CFT1YDR301W CSL4P53859 292 aaPredicted RBP1.56□□□□□ -2.16
CFT1YDR301W YDR541CQ03049 344 aa1.56□□□□□ -2.16
CFT1YDR301W DCR2Q05924 578 aa1.56□□□□□ -2.16
CFT1YDR301W RSA3Q05942 220 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W COQ10Q08058 207 aa1.56□□□□□ -2.16
CFT1YDR301W PUS7Q08647 676 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W MCP1Q12106 302 aa1.56□□□□□ -2.16
CFT1YDR301W NFI1Q12216 726 aa1.56□□□□□ -2.16
CFT1YDR301W DYN1P36022 4092 aa1.56□□□□□ -2.16
CFT1YDR301W DIF1O13577 133 aa1.56□□□□□ -2.16
CFT1YDR301W YAP1P19880 650 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W LHS1P36016 881 aa1.56□□□□□ -2.16
CFT1YDR301W SRO77P38163 1010 aa1.56□□□□□ -2.16
CFT1YDR301W IPT1P38954 527 aa1.56□□□□□ -2.16
CFT1YDR301W NOP16P40007 231 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W AZF1P41696 914 aa1.56□□□□□ -2.16
CFT1YDR301W BAT2P47176 376 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W LYS5P50113 272 aa1.56□□□□□ -2.16
CFT1YDR301W YGR067CP53243 804 aa1.56□□□□□ -2.16
CFT1YDR301W PCP1P53259 346 aa1.56□□□□□ -2.16
CFT1YDR301W YGR168CP53293 376 aa1.56□□□□□ -2.16
CFT1YDR301W HAS1Q03532 505 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W YLR036CQ07986 203 aa1.56□□□□□ -2.16
CFT1YDR301W NOP12Q08208 459 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W AKR2Q12013 749 aa1.56□□□□□ -2.16
CFT1YDR301W MHF1Q3E835 90 aa1.56□□□□□ -2.16
CFT1YDR301W VCX1Q99385 411 aa1.56□□□□□ -2.16
CFT1YDR301W BEM2P39960 2167 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W RHO1P06780 209 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W COX9P07255 59 aa1.56□□□□□ -2.16
CFT1YDR301W ERD1P16151 362 aa1.56□□□□□ -2.16
CFT1YDR301W MDH1P17505 334 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
CFT1YDR301W GRR1P24814 1151 aa1.56□□□□□ -2.16
CFT1YDR301W PCL2P25693 308 aa1.56□□□□□ -2.16
CFT1YDR301W ITR2P30606 609 aa1.56□□□□□ -2.16
CFT1YDR301W PUP2P32379 260 aa1.56□□□□□ -2.16
CFT1YDR301W PRP21P32524 280 aaPredicted RBP1.56□□□□□ -2.16
CFT1YDR301W YKL071WP36086 256 aa1.56□□□□□ -2.16
CFT1YDR301W TUL1P36096 758 aa1.56□□□□□ -2.16
CFT1YDR301W YBR096WP38256 230 aa1.56□□□□□ -2.16
CFT1YDR301W RPP1P38786 293 aa1.56□□□□□ -2.16
CFT1YDR301W AIM2P39721 246 aa1.56□□□□□ -2.16
CFT1YDR301W PZF1P39933 429 aa1.56□□□□□ -2.16
CFT1YDR301W GPP2P40106 250 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W ELP2P42935 788 aa1.56□□□□□ -2.16
CFT1YDR301W EMC2P47133 292 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W LSG1P53145 640 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W PRM8P53174 237 aa1.56□□□□□ -2.16
CFT1YDR301W YNL165WP53891 406 aa1.56□□□□□ -2.16
CFT1YDR301W PET191Q02772 108 aa1.56□□□□□ -2.16
CFT1YDR301W TLG1Q03322 224 aa1.56□□□□□ -2.16
CFT1YDR301W YMR265CQ03508 461 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W TRS23Q03784 219 aa1.56□□□□□ -2.16
CFT1YDR301W TPP1Q03796 238 aa1.56□□□□□ -2.16
CFT1YDR301W BUR2Q05949 395 aa1.56□□□□□ -2.16
CFT1YDR301W MRPL51Q06090 140 aaPredicted RBP1.56□□□□□ -2.16
CFT1YDR301W YOL073CQ08232 322 aa1.56□□□□□ -2.16
CFT1YDR301W RAX1Q08760 435 aa1.56□□□□□ -2.16
CFT1YDR301W SLF1Q12034 447 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W TPO4Q12256 659 aa1.56□□□□□ -2.16
CFT1YDR301W PST2Q12335 198 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W PNS1Q12412 539 aa1.56□□□□□ -2.16
CFT1YDR301W GAL1P04385 528 aa1.56□□□□□ -2.16
CFT1YDR301W MRPS28P21771 286 aa1.56□□□□□ -2.16
CFT1YDR301W RHB1P25378 209 aa1.56□□□□□ -2.16
CFT1YDR301W EMP70P32802 667 aa1.56□□□□□ -2.16
CFT1YDR301W ECT1P33412 323 aa1.56□□□□□ -2.16
CFT1YDR301W YKR015CP36111 568 aa1.56□□□□□ -2.16
CFT1YDR301W APT2P36973 181 aa1.56□□□□□ -2.16
CFT1YDR301W FES1P38260 290 aa1.56□□□□□ -2.16
CFT1YDR301W BIG1P38813 335 aa1.56□□□□□ -2.16
CFT1YDR301W DDI1P40087 428 aa1.56□□□□□ -2.16
CFT1YDR301W RPL10P41805 221 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W RPS0BP46654 252 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W TMA20P89886 181 aaPredicted RBP1.56□□□□□ -2.16
CFT1YDR301W SMP3Q04174 516 aa1.56□□□□□ -2.16
CFT1YDR301W ERB1Q04660 807 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W NAT4Q04751 285 aa1.56□□□□□ -2.16
CFT1YDR301W YMR226CQ05016 267 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W ATG17Q06410 417 aa1.56□□□□□ -2.16
CFT1YDR301W BRX1Q08235 291 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W RPS21BQ3E754 87 aaKnown RBP1.56□□□□□ -2.16
CFT1YDR301W MF(ALPHA)1P01149 165 aa1.55□□□□□ -2.16
CFT1YDR301W RPL11AP0C0W9 174 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W PHO80P20052 293 aa1.55□□□□□ -2.16
CFT1YDR301W RFA1P22336 621 aaKnown RBP1.55□□□□□ -2.16
CFT1YDR301W NFS1P25374 497 aa1.55□□□□□ -2.16
CFT1YDR301W ADH7P25377 361 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms