RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C YHR045WP38775 560 aa4.29□□□□□ -1.72
NUP42YDR192C OSW5P40219 148 aa4.29□□□□□ -1.72
NUP42YDR192C JEM1P40358 645 aa4.29□□□□□ -1.72
NUP42YDR192C ELP2P42935 788 aa4.29□□□□□ -1.72
NUP42YDR192C CAK1P43568 368 aaPredicted RBP4.29□□□□□ -1.72
NUP42YDR192C YFL012WP43580 148 aa4.29□□□□□ -1.72
NUP42YDR192C TMA22P47089 198 aaPredicted RBP4.29□□□□□ -1.72
NUP42YDR192C YNL010WP53981 241 aaKnown RBP4.29□□□□□ -1.72
NUP42YDR192C MEH1Q02205 184 aa4.29□□□□□ -1.72
NUP42YDR192C RPM2Q02773 1202 aa4.29□□□□□ -1.72
NUP42YDR192C ARX1Q03862 593 aaKnown RBP4.29□□□□□ -1.72
NUP42YDR192C CSN9Q03981 162 aa4.29□□□□□ -1.72
NUP42YDR192C BCH1Q05029 724 aa4.29□□□□□ -1.72
NUP42YDR192C MRPL51Q06090 140 aaPredicted RBP4.29□□□□□ -1.72
NUP42YDR192C YDL009CQ12210 107 aa4.29□□□□□ -1.72
NUP42YDR192C ADF1Q2V2Q1 113 aa4.29□□□□□ -1.72
NUP42YDR192C SAS5Q99314 248 aa4.29□□□□□ -1.72
NUP42YDR192C STE2D6VTK4 431 aa4.28□□□□□ -1.72
NUP42YDR192C UBA1P22515 1024 aaKnown RBP4.28□□□□□ -1.72
NUP42YDR192C SGV1P23293 657 aaKnown RBP4.28□□□□□ -1.72
NUP42YDR192C SEC14P24280 304 aaKnown RBP4.28□□□□□ -1.72
NUP42YDR192C RBK1P25332 333 aa4.28□□□□□ -1.72
NUP42YDR192C YIM1P28625 365 aa4.28□□□□□ -1.72
NUP42YDR192C CRM1P30822 1084 aaKnown RBP4.28□□□□□ -1.72
NUP42YDR192C ATP11P32453 318 aa4.28□□□□□ -1.72
NUP42YDR192C RPS1AP33442 255 aaKnown RBP4.28□□□□□ -1.72
NUP42YDR192C FRE2P36033 711 aa4.28□□□□□ -1.72
NUP42YDR192C SIF2P38262 535 aa4.28□□□□□ -1.72
NUP42YDR192C EFM1P38732 585 aa4.28□□□□□ -1.72
NUP42YDR192C FAU1P40099 211 aa4.28□□□□□ -1.72
NUP42YDR192C YIL001WP40560 513 aa4.28□□□□□ -1.72
NUP42YDR192C ART5P53244 586 aaKnown RBP4.28□□□□□ -1.72
NUP42YDR192C SHY1P53266 389 aa4.28□□□□□ -1.72
NUP42YDR192C COS6P53344 381 aa4.28□□□□□ -1.72
NUP42YDR192C PRM1P53835 661 aa4.28□□□□□ -1.72
NUP42YDR192C YNL260CP53846 198 aa4.28□□□□□ -1.72
NUP42YDR192C HOT1Q03213 719 aa4.28□□□□□ -1.72
NUP42YDR192C NDL1Q06568 189 aa4.28□□□□□ -1.72
NUP42YDR192C YLR046CQ12253 270 aa4.28□□□□□ -1.72
NUP42YDR192C OCA6Q12454 224 aa4.28□□□□□ -1.72
NUP42YDR192C MDM35O60200 86 aa4.27□□□□□ -1.73
NUP42YDR192C MES1P00958 751 aaKnown RBP4.27□□□□□ -1.73
NUP42YDR192C CBP2P03874 630 aaPredicted RBP4.27□□□□□ -1.73
NUP42YDR192C AMD1P15274 810 aaKnown RBP4.27□□□□□ -1.73
NUP42YDR192C HSP26P15992 214 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
NUP42YDR192C MDH1P17505 334 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
NUP42YDR192C ATP10P18496 279 aa4.27□□□□□ -1.73
NUP42YDR192C CPR2P23285 205 aa4.27□□□□□ -1.73
NUP42YDR192C DBR1P24309 405 aaKnown RBP4.27□□□□□ -1.73
NUP42YDR192C GEX1P25596 615 aa4.27□□□□□ -1.73
NUP42YDR192C YCR099CP25657 155 aa4.27□□□□□ -1.73
NUP42YDR192C PHO91P27514 894 aa4.27□□□□□ -1.73
NUP42YDR192C TFC1P32367 649 aa4.27□□□□□ -1.73
NUP42YDR192C VPS21P36017 210 aaKnown RBP4.27□□□□□ -1.73
NUP42YDR192C SYG1P40528 902 aa4.27□□□□□ -1.73
NUP42YDR192C NAS6P50086 228 aa4.27□□□□□ -1.73
NUP42YDR192C TIM13P53299 105 aa4.27□□□□□ -1.73
NUP42YDR192C DSL1P53847 754 aa4.27□□□□□ -1.73
NUP42YDR192C IBD2P53892 351 aa4.27□□□□□ -1.73
NUP42YDR192C RMI1Q02685 241 aa4.27□□□□□ -1.73
NUP42YDR192C GGA1Q06336 557 aa4.27□□□□□ -1.73
NUP42YDR192C SYO1Q07395 620 aa4.27□□□□□ -1.73
NUP42YDR192C SGT1Q08446 395 aa4.27□□□□□ -1.73
NUP42YDR192C MUM3Q08750 479 aa4.27□□□□□ -1.73
NUP42YDR192C NDD1Q08887 554 aa4.27□□□□□ -1.73
NUP42YDR192C YPR202WQ08993 238 aa4.27□□□□□ -1.73
NUP42YDR192C YMR030W-AQ3E760 96 aa4.27□□□□□ -1.73
NUP42YDR192C RIP1P08067 215 aa4.26□□□□□ -1.73
NUP42YDR192C YKR104WP0CE69 306 aa4.26□□□□□ -1.73
NUP42YDR192C RPL40AP0CH08 128 aaKnown RBP4.26□□□□□ -1.73
NUP42YDR192C RPL40BP0CH09 128 aaKnown RBP4.26□□□□□ -1.73
NUP42YDR192C FPR1P20081 114 aaKnown RBP4.26□□□□□ -1.73
NUP42YDR192C EPT1P22140 391 aa4.26□□□□□ -1.73
NUP42YDR192C ZIP1P31111 875 aa4.26□□□□□ -1.73
NUP42YDR192C TIP20P33891 701 aa4.26□□□□□ -1.73
NUP42YDR192C RSM22P36056 628 aa4.26□□□□□ -1.73
NUP42YDR192C TRM5P38793 499 aa4.26□□□□□ -1.73
NUP42YDR192C YND1P40009 630 aa4.26□□□□□ -1.73
NUP42YDR192C YRB1P41920 201 aaKnown RBP4.26□□□□□ -1.73
NUP42YDR192C GLG2P47011 380 aa4.26□□□□□ -1.73
NUP42YDR192C IKS1P47042 667 aa4.26□□□□□ -1.73
NUP42YDR192C GTO1P48239 356 aa4.26□□□□□ -1.73
NUP42YDR192C TOM22P49334 152 aa4.26□□□□□ -1.73
NUP42YDR192C MDM34P53083 459 aa4.26□□□□□ -1.73
NUP42YDR192C USE1P53146 245 aa4.26□□□□□ -1.73
NUP42YDR192C MPS2P53159 387 aa4.26□□□□□ -1.73
NUP42YDR192C SWC4P53201 476 aa4.26□□□□□ -1.73
NUP42YDR192C REX2P54964 269 aaKnown RBP4.26□□□□□ -1.73
NUP42YDR192C SPO19Q03029 223 aa4.26□□□□□ -1.73
NUP42YDR192C ACL4Q03771 387 aa4.26□□□□□ -1.73
NUP42YDR192C VHS1Q03785 461 aa4.26□□□□□ -1.73
NUP42YDR192C GMC2Q06201 188 aa4.26□□□□□ -1.73
NUP42YDR192C YLR413WQ06689 675 aa4.26□□□□□ -1.73
NUP42YDR192C SLD7Q08457 257 aa4.26□□□□□ -1.73
NUP42YDR192C SNX3Q08826 162 aaKnown RBP4.26□□□□□ -1.73
NUP42YDR192C REV1P12689 985 aa4.25□□□□□ -1.73
NUP42YDR192C GCD2P12754 651 aaPredicted RBP4.25□□□□□ -1.73
NUP42YDR192C CDC23P16522 626 aa4.25□□□□□ -1.73
NUP42YDR192C URA4P20051 364 aa4.25□□□□□ -1.73
NUP42YDR192C RVS161P25343 265 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms