RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C ZRG17P53735 605 aa3.92□□□□□ -1.78
CDC9YDL164C ARP10Q04549 284 aa3.92□□□□□ -1.78
CDC9YDL164C ADH6Q04894 360 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C RPS24AP0CX31 135 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C RPS24BP0CX32 135 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C YAK1P14680 807 aa3.91□□□□□ -1.78
CDC9YDL164C STE18P18852 110 aa3.91□□□□□ -1.78
CDC9YDL164C APE2P32454 952 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C LIP5P32875 414 aa3.91□□□□□ -1.78
CDC9YDL164C PDR3P33200 976 aa3.91□□□□□ -1.78
CDC9YDL164C YBR241CP38142 488 aa3.91□□□□□ -1.78
CDC9YDL164C YMR262WP38430 313 aa3.91□□□□□ -1.78
CDC9YDL164C YPT11P48559 417 aa3.91□□□□□ -1.78
CDC9YDL164C YDC1Q02896 317 aa3.91□□□□□ -1.78
CDC9YDL164C YLL056CQ12177 298 aa3.91□□□□□ -1.78
CDC9YDL164C YLR419WQ06698 1435 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C TOP2P06786 1428 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C RPL31AP0C2H8 113 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C ARF1P11076 181 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C AMD1P15274 810 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C MBR1P23493 339 aa3.91□□□□□ -1.78
CDC9YDL164C RPL24BP24000 155 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C YCR102CP25608 368 aa3.91□□□□□ -1.78
CDC9YDL164C MEI4P29467 408 aa3.91□□□□□ -1.78
CDC9YDL164C LOS1P33418 1100 aaPredicted RBP3.91□□□□□ -1.78
CDC9YDL164C BMT2P38278 337 aa3.91□□□□□ -1.78
CDC9YDL164C ISC1P40015 477 aaKnown RBP3.91□□□□□ -1.78
CDC9YDL164C NDC80P40460 691 aa3.91□□□□□ -1.78
CDC9YDL164C GDS1P41913 522 aa3.91□□□□□ -1.78
CDC9YDL164C LIF1P53150 421 aa3.91□□□□□ -1.78
CDC9YDL164C CDH1P53197 566 aa3.91□□□□□ -1.78
CDC9YDL164C SLX9P53251 210 aaPredicted RBP3.91□□□□□ -1.78
CDC9YDL164C SOL4P53315 255 aa3.91□□□□□ -1.78
CDC9YDL164C CPR8P53728 308 aa3.91□□□□□ -1.78
CDC9YDL164C FRE4P53746 719 aa3.91□□□□□ -1.78
CDC9YDL164C VPS60Q03390 229 aa3.91□□□□□ -1.78
CDC9YDL164C KRE28Q04431 385 aa3.91□□□□□ -1.78
CDC9YDL164C SHS1Q07657 551 aa3.91□□□□□ -1.78
CDC9YDL164C POX1P13711 748 aa3.9□□□□□ -1.79
CDC9YDL164C SLM5P25345 492 aaKnown RBP3.9□□□□□ -1.79
CDC9YDL164C POF1P25576 258 aa3.9□□□□□ -1.79
CDC9YDL164C CHK1P38147 527 aa3.9□□□□□ -1.79
CDC9YDL164C GAT1P43574 510 aa3.9□□□□□ -1.79
CDC9YDL164C CTK3P46963 296 aaPredicted RBP3.9□□□□□ -1.79
CDC9YDL164C HMS2P47175 358 aa3.9□□□□□ -1.79
CDC9YDL164C VEL1P53058 206 aa3.9□□□□□ -1.79
CDC9YDL164C YMR166CQ03829 368 aa3.9□□□□□ -1.79
CDC9YDL164C GIS1Q03833 894 aa3.9□□□□□ -1.79
CDC9YDL164C CDA2Q06703 312 aa3.9□□□□□ -1.79
CDC9YDL164C MLP2P40457 1679 aa3.9□□□□□ -1.79
CDC9YDL164C NDC1P32500 655 aa3.9□□□□□ -1.79
CDC9YDL164C RSM22P36056 628 aa3.9□□□□□ -1.79
CDC9YDL164C DBP7P36120 742 aaKnown RBP3.9□□□□□ -1.79
CDC9YDL164C ATG12P38316 186 aa3.9□□□□□ -1.79
CDC9YDL164C SEC72P39742 193 aaKnown RBP3.9□□□□□ -1.79
CDC9YDL164C BER1Q06688 274 aaKnown RBP3.9□□□□□ -1.79
CDC9YDL164C SLF1Q12034 447 aaKnown RBP3.9□□□□□ -1.79
CDC9YDL164C YDL109CQ12103 647 aa3.9□□□□□ -1.79
CDC9YDL164C RGT2Q12300 763 aa3.9□□□□□ -1.79
CDC9YDL164C BRR1Q99177 341 aaPredicted RBP3.9□□□□□ -1.79
CDC9YDL164C RGS2Q99188 309 aa3.9□□□□□ -1.79
CDC9YDL164C ARF2P19146 181 aaKnown RBP3.89□□□□□ -1.79
CDC9YDL164C REC114P32841 428 aa3.89□□□□□ -1.79
CDC9YDL164C RFT1P38206 574 aaPredicted RBP3.89□□□□□ -1.79
CDC9YDL164C PRS2P38620 318 aaKnown RBP3.89□□□□□ -1.79
CDC9YDL164C YAT2P40017 923 aa3.89□□□□□ -1.79
CDC9YDL164C COX16P47081 118 aa3.89□□□□□ -1.79
CDC9YDL164C YJR079WP47126 109 aa3.89□□□□□ -1.79
CDC9YDL164C YIP1P53039 248 aa3.89□□□□□ -1.79
CDC9YDL164C MTM1P53320 366 aa3.89□□□□□ -1.79
CDC9YDL164C YPQ1Q12010 308 aa3.89□□□□□ -1.79
CDC9YDL164C YLR049CQ12110 428 aa3.89□□□□□ -1.79
CDC9YDL164C YLR111WQ12528 110 aa3.89□□□□□ -1.79
CDC9YDL164C HSL1P34244 1518 aa3.89□□□□□ -1.79
CDC9YDL164C THO2P53552 1597 aaKnown RBP3.89□□□□□ -1.79
CDC9YDL164C HTB1P02293 131 aaKnown RBP3.88□□□□□ -1.79
CDC9YDL164C HTB2P02294 131 aa3.88□□□□□ -1.79
CDC9YDL164C YBR121C-AP0C5L4 52 aa3.88□□□□□ -1.79
CDC9YDL164C YMC1P32331 307 aa3.88□□□□□ -1.79
CDC9YDL164C AME1P38313 324 aa3.88□□□□□ -1.79
CDC9YDL164C ICE2P40499 491 aa3.88□□□□□ -1.79
CDC9YDL164C YIL001WP40560 513 aa3.88□□□□□ -1.79
CDC9YDL164C YRB1P41920 201 aaKnown RBP3.88□□□□□ -1.79
CDC9YDL164C IBA57P47158 497 aa3.88□□□□□ -1.79
CDC9YDL164C YGL159WP53110 370 aa3.88□□□□□ -1.79
CDC9YDL164C YMR226CQ05016 267 aaKnown RBP3.88□□□□□ -1.79
CDC9YDL164C YDL218WQ07629 317 aa3.88□□□□□ -1.79
CDC9YDL164C SAM4Q08985 325 aaKnown RBP3.88□□□□□ -1.79
CDC9YDL164C PFA4Q12006 378 aa3.88□□□□□ -1.79
CDC9YDL164C SCC2Q04002 1493 aa3.88□□□□□ -1.79
CDC9YDL164C ATO2P32907 282 aa3.88□□□□□ -1.79
CDC9YDL164C NTF2P33331 125 aaKnown RBP3.88□□□□□ -1.79
CDC9YDL164C YPC1P38298 316 aa3.88□□□□□ -1.79
CDC9YDL164C LAG1P38703 411 aa3.88□□□□□ -1.79
CDC9YDL164C YNL140CP53910 189 aa3.88□□□□□ -1.79
CDC9YDL164C HER2Q03557 464 aa3.88□□□□□ -1.79
CDC9YDL164C YMR114CQ04471 368 aaKnown RBP3.88□□□□□ -1.79
CDC9YDL164C ECI1Q05871 280 aa3.88□□□□□ -1.79
CDC9YDL164C TAZ1Q06510 381 aa3.88□□□□□ -1.79
CDC9YDL164C NDE2Q07500 545 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms