RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W VMA8P32610 256 aaKnown RBP6.53□□□□□ -1.36
NUP84YDL116W MRPL16P38064 232 aa6.53□□□□□ -1.36
NUP84YDL116W ECM34P38728 170 aa6.53□□□□□ -1.36
NUP84YDL116W LRP1P38801 184 aaKnown RBP6.53□□□□□ -1.36
NUP84YDL116W YTA6P40328 754 aa6.53□□□□□ -1.36
NUP84YDL116W YIL161WP40449 235 aaKnown RBP6.53□□□□□ -1.36
NUP84YDL116W FAF1P40546 346 aaPredicted RBP6.53□□□□□ -1.36
NUP84YDL116W PFS2P42841 465 aaKnown RBP6.53□□□□□ -1.36
NUP84YDL116W ECM27P47144 725 aa6.53□□□□□ -1.36
NUP84YDL116W MDM34P53083 459 aa6.53□□□□□ -1.36
NUP84YDL116W YPL068CQ02749 293 aa6.53□□□□□ -1.36
NUP84YDL116W EAR1Q03212 550 aa6.53□□□□□ -1.36
NUP84YDL116W OST6Q03723 332 aa6.53□□□□□ -1.36
NUP84YDL116W VBA1Q04301 562 aa6.53□□□□□ -1.36
NUP84YDL116W RNH1Q04740 348 aa6.53□□□□□ -1.36
NUP84YDL116W CIA1Q05583 330 aa6.53□□□□□ -1.36
NUP84YDL116W NBA1Q08229 501 aaKnown RBP6.53□□□□□ -1.36
NUP84YDL116W YOR214CQ12282 236 aa6.53□□□□□ -1.36
NUP84YDL116W PRB1P09232 635 aa6.52□□□□□ -1.36
NUP84YDL116W ZWF1P11412 505 aaKnown RBP6.52□□□□□ -1.36
NUP84YDL116W RRF1P38771 230 aa6.52□□□□□ -1.36
NUP84YDL116W MET30P39014 640 aa6.52□□□□□ -1.36
NUP84YDL116W PLB1P39105 664 aa6.52□□□□□ -1.36
NUP84YDL116W YFR018CP43599 363 aa6.52□□□□□ -1.36
NUP84YDL116W YFR020WP43600 232 aa6.52□□□□□ -1.36
NUP84YDL116W PAC10P48363 199 aa6.52□□□□□ -1.36
NUP84YDL116W NBP35P52920 328 aa6.52□□□□□ -1.36
NUP84YDL116W IPI3P53877 555 aa6.52□□□□□ -1.36
NUP84YDL116W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.52□□□□□ -1.36not detected
NUP84YDL116W RTN1Q04947 295 aaKnown RBP6.52□□□□□ -1.36
NUP84YDL116W YLR346CQ06139 101 aa6.52□□□□□ -1.36
NUP84YDL116W DXO1Q06349 442 aa6.52□□□□□ -1.36
NUP84YDL116W PER33Q12144 273 aa6.52□□□□□ -1.36
NUP84YDL116W YOL114CQ12322 202 aa6.52□□□□□ -1.36
NUP84YDL116W YJR112W-AQ3E743 109 aa6.52□□□□□ -1.36
NUP84YDL116W YBR085C-AO43137 85 aa6.52□□□□□ -1.37
NUP84YDL116W ADK1P07170 222 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W TY1A-LR4P0C2I8 440 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W TY1A-DR6P0CX70 440 aa6.52□□□□□ -1.37
NUP84YDL116W TY1A-ER1P0CX71 440 aa6.52□□□□□ -1.37
NUP84YDL116W TY1A-LR2P0CX72 440 aa6.52□□□□□ -1.37
NUP84YDL116W TY1A-PLP0CX73 440 aa6.52□□□□□ -1.37
NUP84YDL116W TY1A-JR1P0CX74 440 aa6.52□□□□□ -1.37
NUP84YDL116W TY1A-LR3P0CX75 440 aa6.52□□□□□ -1.37
NUP84YDL116W TY1A-ML2P0CX76 440 aa6.52□□□□□ -1.37
NUP84YDL116W HEM13P11353 328 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W TFS1P14306 219 aa6.52□□□□□ -1.37
NUP84YDL116W AAC3P18238 307 aa6.52□□□□□ -1.37
NUP84YDL116W DBP3P20447 523 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W CHL1P22516 861 aaPredicted RBP6.52□□□□□ -1.37
NUP84YDL116W HXT2P23585 541 aa6.52□□□□□ -1.37
NUP84YDL116W ACB1P31787 87 aa6.52□□□□□ -1.37
NUP84YDL116W MOT2P34909 587 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W SDS22P36047 338 aa6.52□□□□□ -1.37
NUP84YDL116W RPS20P38701 121 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W PEX28P38848 579 aa6.52□□□□□ -1.37
NUP84YDL116W AXL2P38928 823 aa6.52□□□□□ -1.37
NUP84YDL116W YNL195CP40168 261 aa6.52□□□□□ -1.37
NUP84YDL116W CIN1P40987 1014 aa6.52□□□□□ -1.37
NUP84YDL116W COG7P53195 279 aa6.52□□□□□ -1.37
NUP84YDL116W YGR026WP53217 278 aa6.52□□□□□ -1.37
NUP84YDL116W PGA1P53896 198 aa6.52□□□□□ -1.37
NUP84YDL116W HLR1Q04429 423 aa6.52□□□□□ -1.37
NUP84YDL116W YDR344CQ05510 147 aa6.52□□□□□ -1.37
NUP84YDL116W MRI1Q06489 411 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W FRE3Q08905 711 aa6.52□□□□□ -1.37
NUP84YDL116W TY1A-GR1Q12085 440 aa6.52□□□□□ -1.37
NUP84YDL116W LYS21Q12122 440 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W RRP42Q12277 265 aaPredicted RBP6.52□□□□□ -1.37
NUP84YDL116W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W TY1A-OLQ92392 440 aaKnown RBP6.52□□□□□ -1.37
NUP84YDL116W RPP2BP02400 110 aaKnown RBP6.51□□□□□ -1.37
NUP84YDL116W RPS17AP02407 136 aaKnown RBP6.51□□□□□ -1.37
NUP84YDL116W RPS17BP14127 136 aaKnown RBP6.51□□□□□ -1.37
NUP84YDL116W PHO80P20052 293 aa6.51□□□□□ -1.37
NUP84YDL116W NAM9P27929 486 aa6.51□□□□□ -1.37
NUP84YDL116W FUN26P31381 517 aa6.51□□□□□ -1.37
NUP84YDL116W CHS7P38843 316 aa6.51□□□□□ -1.37
NUP84YDL116W PTH1P38876 190 aaKnown RBP6.51□□□□□ -1.37
NUP84YDL116W BIT61P47041 543 aa6.51□□□□□ -1.37
NUP84YDL116W YJR111CP47148 283 aaKnown RBP6.51□□□□□ -1.37
NUP84YDL116W DOC1P53068 250 aa6.51□□□□□ -1.37
NUP84YDL116W YDR249CQ03787 373 aa6.51□□□□□ -1.37
NUP84YDL116W YLR446WQ06204 433 aa6.51□□□□□ -1.37
NUP84YDL116W ATP16Q12165 160 aa6.51□□□□□ -1.37
NUP84YDL116W BMT6Q12291 365 aa6.51□□□□□ -1.37
NUP84YDL116W EPT1P22140 391 aa6.51□□□□□ -1.37
NUP84YDL116W GPI12P23797 304 aa6.51□□□□□ -1.37
NUP84YDL116W BOS1P25385 244 aa6.51□□□□□ -1.37
NUP84YDL116W MGM101P32787 269 aaKnown RBP6.51□□□□□ -1.37
NUP84YDL116W VPS17P32913 551 aa6.51□□□□□ -1.37
NUP84YDL116W IML3P38265 245 aa6.51□□□□□ -1.37
NUP84YDL116W RFC4P40339 323 aaKnown RBP6.51□□□□□ -1.37
NUP84YDL116W BAP3P41815 604 aa6.51□□□□□ -1.37
NUP84YDL116W YPL034WQ03083 165 aa6.51□□□□□ -1.37
NUP84YDL116W DFG5Q05031 458 aa6.51□□□□□ -1.37
NUP84YDL116W YLR040CQ07988 224 aa6.51□□□□□ -1.37
NUP84YDL116W TRM8Q12009 286 aa6.51□□□□□ -1.37
NUP84YDL116W ICL2Q12031 575 aa6.51□□□□□ -1.37
NUP84YDL116W CPA1P07258 411 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms