RNA–Protein interactions for RNA: YDL090C

RAM1, Transcript of Beta subunit of the CAAX farnesyltransferase (FTase), yeast

Gene RAM1, Length 1,296 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAM1	YDL090C	DCC1	P25559	380 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	ERG9	P29704	444 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	PRO3	P32263	286 aa	Known RBP	4.63	□□□□□ -1.67
RAM1	YDL090C	YMR262W	P38430	313 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	SMF2	P38778	549 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	YPT35	P38815	214 aa	Known RBP	4.63	□□□□□ -1.67
RAM1	YDL090C	MDM31	P38880	579 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	KRE9	P39005	276 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	YIL029C	P40538	142 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	DSN1	P40568	576 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	FMP33	P46998	180 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	VPS60	Q03390	229 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	UBX2	Q04228	584 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	NDE2	Q07500	545 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	TY3A-G	Q12173	290 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	TY3A-I	Q99219	290 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	TSC11	P40061	1430 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	TRM3	Q07527	1436 aa		4.63	□□□□□ -1.67
RAM1	YDL090C	NUP159	P40477	1460 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	SSK2	P53599	1579 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	ICL1	P28240	557 aa	Predicted RBP	4.62	□□□□□ -1.67
RAM1	YDL090C	DTR1	P38125	572 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	SPT8	P38915	602 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	RCY1	P39531	840 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	PRM5	P40476	318 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	YFL067W	P43537	175 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	WWM1	P43582	211 aa	Known RBP	4.62	□□□□□ -1.67
RAM1	YDL090C	MKC7	P53379	596 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	BIO4	P53630	237 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	YMR102C	Q03177	834 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	HNT3	Q08702	217 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	YOL107W	Q12239	342 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	PRP46	Q12417	451 aa	Predicted RBP	4.62	□□□□□ -1.67
RAM1	YDL090C	EAF3	Q12432	401 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	YBR298C-A	Q8TGK4	73 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	SCC2	Q04002	1493 aa		4.62	□□□□□ -1.67
RAM1	YDL090C	PDR5	P33302	1511 aa	Known RBP	4.62	□□□□□ -1.67
RAM1	YDL090C	PIS1	P06197	220 aa	Known RBP	4.61	□□□□□ -1.67
RAM1	YDL090C	RAD7	P06779	565 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	CPR4	P25334	318 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	ACB1	P31787	87 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	KAR9	P32526	644 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	RAD5	P32849	1169 aa	Predicted RBP	4.61	□□□□□ -1.67
RAM1	YDL090C	YKR015C	P36111	568 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	ECM8	P38246	354 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	YIL067C	P40514	678 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	AIM24	P47127	394 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	LSG1	P53145	640 aa	Known RBP	4.61	□□□□□ -1.67
RAM1	YDL090C	PBP4	Q07362	185 aa	Known RBP	4.61	□□□□□ -1.67
RAM1	YDL090C	ALE1	Q08548	619 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	SIA1	Q12212	622 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	YCL021W-A	Q96VH3	125 aa		4.61	□□□□□ -1.67
RAM1	YDL090C	PHO2	P07269	559 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	RSR1	P13856	272 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	FRS2	P15625	503 aa	Known RBP	4.6	□□□□□ -1.67
RAM1	YDL090C	SPO23	P33757	523 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	AVT5	P38176	459 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	PET100	P38958	111 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	SLM1	P40485	686 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	IDP2	P41939	412 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	OKP1	P53298	406 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	PRM6	Q04705	352 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	YTH1	Q06102	208 aa	Predicted RBP	4.6	□□□□□ -1.67
RAM1	YDL090C	LOT6	Q07923	191 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	YPQ1	Q12010	308 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	SLF1	Q12034	447 aa	Known RBP	4.6	□□□□□ -1.67
RAM1	YDL090C	UBA3	Q99344	299 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	GCN2	P15442	1659 aa		4.6	□□□□□ -1.67
RAM1	YDL090C	RAD3	P06839	778 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	REV3	P14284	1504 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	RBK1	P25332	333 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	CHA1	P25379	360 aa	Known RBP	4.59	□□□□□ -1.67
RAM1	YDL090C	POP5	P28005	173 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	COY1	P34237	679 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	RIO2	P40160	425 aa	Known RBP	4.59	□□□□□ -1.67
RAM1	YDL090C	YFL040W	P43562	540 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	CIN2	P46670	268 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	COX16	P47081	118 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	YPL080C	Q02826	108 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	TLG1	Q03322	224 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	SMC5	Q08204	1093 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	ESA1	Q08649	445 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	FCY22	Q12119	530 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	YGK3	Q12222	375 aa	Predicted RBP	4.59	□□□□□ -1.67
RAM1	YDL090C	PCL9	Q12477	304 aa		4.59	□□□□□ -1.67
RAM1	YDL090C	SAL1	D6W196	494 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	RPL24A	P04449	155 aa	Known RBP	4.58	□□□□□ -1.68
RAM1	YDL090C	DAL2	P25335	343 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	DEP1	P31385	405 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	MED8	P38304	223 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	FHL1	P39521	936 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	YJR085C	P47131	105 aa	Known RBP	4.58	□□□□□ -1.68
RAM1	YDL090C	BIO3	P50277	480 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	SEH1	P53011	349 aa	Known RBP	4.58	□□□□□ -1.68
RAM1	YDL090C	YNL134C	P53912	376 aa	Known RBP	4.58	□□□□□ -1.68
RAM1	YDL090C	SPP2	Q02521	185 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	YPR091C	Q06833	770 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	PPT2	Q12036	173 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	SLM3	Q12093	417 aa		4.58	□□□□□ -1.68
RAM1	YDL090C	TMS1	Q12116	473 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms