RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C KKQ8P36004 724 aa1.02□□□□□ -2.25
VAM6YDL077C ELF1P36053 145 aa1.02□□□□□ -2.25
VAM6YDL077C TVP38P36164 337 aa1.02□□□□□ -2.25
VAM6YDL077C KTR3P38130 404 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C EXO5P38289 585 aa1.02□□□□□ -2.25
VAM6YDL077C PRS3P38689 320 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C FYV4P38783 130 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C MDM31P38880 579 aa1.02□□□□□ -2.25
VAM6YDL077C RBG1P39729 369 aa1.02□□□□□ -2.25
VAM6YDL077C COG3P40094 801 aa1.02□□□□□ -2.25
VAM6YDL077C YIL089WP40500 205 aa1.02□□□□□ -2.25
VAM6YDL077C PRM2P40534 656 aa1.02□□□□□ -2.25
VAM6YDL077C YJL218WP40892 196 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C QRI1P43123 477 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C ALR2P43553 858 aa1.02□□□□□ -2.25
VAM6YDL077C DLD2P46681 530 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C ZAP1P47043 880 aa1.02□□□□□ -2.25
VAM6YDL077C BUL1P48524 976 aa1.02□□□□□ -2.25
VAM6YDL077C NUP57P48837 541 aa1.02□□□□□ -2.25
VAM6YDL077C STR3P53101 465 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C PUS2P53167 370 aa1.02□□□□□ -2.25
VAM6YDL077C RTT102P53330 157 aa1.02□□□□□ -2.25
VAM6YDL077C MET14Q02196 202 aa1.02□□□□□ -2.25
VAM6YDL077C TRM44Q02648 567 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C YMR099CQ03161 297 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C MSC2Q03455 724 aa1.02□□□□□ -2.25
VAM6YDL077C YMR010WQ03687 405 aa1.02□□□□□ -2.25
VAM6YDL077C YML037CQ03703 340 aa1.02□□□□□ -2.25
VAM6YDL077C CAB1Q04430 367 aa1.02□□□□□ -2.25
VAM6YDL077C YML053CQ04978 212 aa1.02□□□□□ -2.25
VAM6YDL077C RTT103Q05543 409 aa1.02□□□□□ -2.25
VAM6YDL077C YTH1Q06102 208 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C PAU23Q07987 124 aa1.02□□□□□ -2.25
VAM6YDL077C RFU1Q08003 200 aa1.02□□□□□ -2.25
VAM6YDL077C YOL075CQ08234 1294 aa1.02□□□□□ -2.25
VAM6YDL077C YPR022CQ12139 1133 aa1.02□□□□□ -2.25
VAM6YDL077C UPC2Q12151 913 aa1.02□□□□□ -2.25
VAM6YDL077C INP53Q12271 1107 aa1.02□□□□□ -2.25
VAM6YDL077C PST2Q12335 198 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C PAU17Q12370 124 aa1.02□□□□□ -2.25
VAM6YDL077C TFC7Q12415 435 aa1.02□□□□□ -2.25
VAM6YDL077C ISA2Q12425 185 aa1.02□□□□□ -2.25
VAM6YDL077C RPS28AQ3E7X9 67 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C MOT1P32333 1867 aa1.02□□□□□ -2.25
VAM6YDL077C PMD1P32634 1753 aa1.02□□□□□ -2.25
VAM6YDL077C YLR358CO13565 187 aa1.02□□□□□ -2.25
VAM6YDL077C SGA1P08019 549 aa1.02□□□□□ -2.25
VAM6YDL077C PAU19P0CE85 124 aa1.02□□□□□ -2.25
VAM6YDL077C PAU21P0CE86 164 aa1.02□□□□□ -2.25
VAM6YDL077C PAU22P0CE87 164 aa1.02□□□□□ -2.25
VAM6YDL077C RPS4AP0CX35 261 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C RPS4BP0CX36 261 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C YPK1P12688 680 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C CPR1P14832 162 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C ATP10P18496 279 aa1.02□□□□□ -2.25
VAM6YDL077C SAN1P22470 610 aa1.02□□□□□ -2.25
VAM6YDL077C AAT2P23542 418 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C EXG1P23776 448 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C YCP4P25349 247 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C NPP1P25353 742 aa1.02□□□□□ -2.25
VAM6YDL077C LSB5P25369 354 aa1.02□□□□□ -2.25
VAM6YDL077C PAU3P25610 124 aa1.02□□□□□ -2.25
VAM6YDL077C EHD3P28817 500 aa1.02□□□□□ -2.25
VAM6YDL077C SUA7P29055 345 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C MSS51P32335 436 aa1.02□□□□□ -2.25
VAM6YDL077C SFP1P32432 683 aa1.02□□□□□ -2.25
VAM6YDL077C MGM101P32787 269 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C EMP24P32803 203 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C ECT1P33412 323 aa1.02□□□□□ -2.25
VAM6YDL077C TIP20P33891 701 aa1.02□□□□□ -2.25
VAM6YDL077C PHO11P35842 467 aa1.02□□□□□ -2.25
VAM6YDL077C YKL075CP36083 450 aa1.02□□□□□ -2.25
VAM6YDL077C RPF2P36160 344 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C MRPL4P36517 319 aa1.02□□□□□ -2.25
VAM6YDL077C MRPL24P36525 258 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C QDR3P38227 689 aa1.02□□□□□ -2.25
VAM6YDL077C MMS4P38257 691 aa1.02□□□□□ -2.25
VAM6YDL077C PHO12P38693 467 aa1.02□□□□□ -2.25
VAM6YDL077C MUP3P38734 546 aa1.02□□□□□ -2.25
VAM6YDL077C YPT35P38815 214 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C ALP1P38971 573 aa1.02□□□□□ -2.25
VAM6YDL077C PHO90P39535 881 aa1.02□□□□□ -2.25
VAM6YDL077C PRM9P39551 298 aa1.02□□□□□ -2.25
VAM6YDL077C GDI1P39958 451 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C FMP52P40008 231 aa1.02□□□□□ -2.25
VAM6YDL077C RPL13BP40212 199 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C ELO3P40319 345 aa1.02□□□□□ -2.25
VAM6YDL077C BMT5P40493 336 aa1.02□□□□□ -2.25
VAM6YDL077C AVT7P40501 490 aa1.02□□□□□ -2.25
VAM6YDL077C YIR035CP40579 254 aa1.02□□□□□ -2.25
VAM6YDL077C FAR3P46671 204 aa1.02□□□□□ -2.25
VAM6YDL077C PSP2P50109 593 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C SBH2P52871 88 aa1.02□□□□□ -2.25
VAM6YDL077C MGA1P53050 456 aa1.02□□□□□ -2.25
VAM6YDL077C YGL039WP53183 348 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C RSM27P53305 110 aa1.02□□□□□ -2.25
VAM6YDL077C RPT4P53549 437 aaKnown RBP1.02□□□□□ -2.25
VAM6YDL077C BUD17P53727 317 aa1.02□□□□□ -2.25
VAM6YDL077C CUS2P53830 285 aaPredicted RBP1.02□□□□□ -2.25
VAM6YDL077C HCH1P53834 153 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 81.4 ms