RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C ICE2P40499 491 aa1.96□□□□□ -2.1
BRE1YDL074C HIS6P40545 261 aa1.96□□□□□ -2.1
BRE1YDL074C PFS2P42841 465 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C ZIM17P42844 174 aa1.96□□□□□ -2.1
BRE1YDL074C FET5P43561 622 aa1.96□□□□□ -2.1
BRE1YDL074C BNA6P43619 295 aa1.96□□□□□ -2.1
BRE1YDL074C TPN1P53099 579 aa1.96□□□□□ -2.1
BRE1YDL074C SGF73P53165 657 aa1.96□□□□□ -2.1
BRE1YDL074C MKC7P53379 596 aa1.96□□□□□ -2.1
BRE1YDL074C DBP6P53734 629 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C MTQ1P53944 314 aa1.96□□□□□ -2.1
BRE1YDL074C PFA5Q03289 374 aa1.96□□□□□ -2.1
BRE1YDL074C RSM28Q03430 361 aa1.96□□□□□ -2.1
BRE1YDL074C SMA2Q04658 369 aa1.96□□□□□ -2.1
BRE1YDL074C SNT309Q06091 175 aaPredicted RBP1.96□□□□□ -2.1
BRE1YDL074C EMG1Q06287 252 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C RRP9Q06506 573 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C DCI1Q08558 271 aa1.96□□□□□ -2.1
BRE1YDL074C YOR365CQ08844 703 aa1.96□□□□□ -2.1
BRE1YDL074C YOL114CQ12322 202 aa1.96□□□□□ -2.1
BRE1YDL074C YDR262WQ12331 272 aa1.96□□□□□ -2.1
BRE1YDL074C YLR111WQ12528 110 aa1.96□□□□□ -2.1
BRE1YDL074C NAG1Q8TGN9 163 aa1.96□□□□□ -2.1
BRE1YDL074C MEX67Q99257 599 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C DET1Q99288 334 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C YEL009C-AA0A023PZF2 135 aa1.96□□□□□ -2.1
BRE1YDL074C GPM1P00950 247 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C CAN1P04817 590 aa1.96□□□□□ -2.1
BRE1YDL074C PEP4P07267 405 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C CAR2P07991 424 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C PBS2P08018 668 aa1.96□□□□□ -2.1
BRE1YDL074C YOL162WP0CF19 215 aa1.96□□□□□ -2.1
BRE1YDL074C PDA1P16387 420 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C VPS33P20795 691 aa1.96□□□□□ -2.1
BRE1YDL074C SLY41P22215 453 aa1.96□□□□□ -2.1
BRE1YDL074C PPH21P23594 369 aa1.96□□□□□ -2.1
BRE1YDL074C PRE7P23724 241 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C CWH43P25618 953 aa1.96□□□□□ -2.1
BRE1YDL074C HOM6P31116 359 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C YMC1P32331 307 aa1.96□□□□□ -2.1
BRE1YDL074C DCG1P32460 244 aa1.96□□□□□ -2.1
BRE1YDL074C NDC1P32500 655 aa1.96□□□□□ -2.1
BRE1YDL074C NIC96P34077 839 aa1.96□□□□□ -2.1
BRE1YDL074C GPX1P36014 167 aa1.96□□□□□ -2.1
BRE1YDL074C JEN1P36035 616 aa1.96□□□□□ -2.1
BRE1YDL074C SDS22P36047 338 aa1.96□□□□□ -2.1
BRE1YDL074C TUL1P36096 758 aa1.96□□□□□ -2.1
BRE1YDL074C MRPL3P36516 390 aa1.96□□□□□ -2.1
BRE1YDL074C TAT1P38085 619 aa1.96□□□□□ -2.1
BRE1YDL074C YBR242WP38331 238 aa1.96□□□□□ -2.1
BRE1YDL074C MNL1P38888 796 aa1.96□□□□□ -2.1
BRE1YDL074C LYS1P38998 373 aaRIP-Chip data1.96□□□□□ -2.1not detected
BRE1YDL074C DLD3P39976 496 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C SYG1P40528 902 aa1.96□□□□□ -2.1
BRE1YDL074C RPE1P46969 238 aa1.96□□□□□ -2.1
BRE1YDL074C IRC18P47056 224 aa1.96□□□□□ -2.1
BRE1YDL074C MSE1P48525 536 aa1.96□□□□□ -2.1
BRE1YDL074C MTM1P53320 366 aa1.96□□□□□ -2.1
BRE1YDL074C PAU12P53343 120 aa1.96□□□□□ -2.1
BRE1YDL074C SNO2P53823 222 aa1.96□□□□□ -2.1
BRE1YDL074C SNP1Q00916 300 aaPredicted RBP1.96□□□□□ -2.1
BRE1YDL074C MAP1Q01662 387 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
BRE1YDL074C YPL068CQ02749 293 aa1.96□□□□□ -2.1
BRE1YDL074C SCS7Q03529 384 aa1.96□□□□□ -2.1
BRE1YDL074C ELP6Q04868 273 aa1.96□□□□□ -2.1
BRE1YDL074C SNO4Q04902 237 aa1.96□□□□□ -2.1
BRE1YDL074C MFB1Q04922 465 aa1.96□□□□□ -2.1
BRE1YDL074C UTP21Q06078 939 aaPredicted RBP1.96□□□□□ -2.1
BRE1YDL074C YLR173WQ06247 608 aa1.96□□□□□ -2.1
BRE1YDL074C YPR127WQ06494 345 aa1.96□□□□□ -2.1
BRE1YDL074C HDA2Q06629 674 aa1.96□□□□□ -2.1
BRE1YDL074C TSR2Q06672 205 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C YLR030WQ07967 263 aa1.96□□□□□ -2.1
BRE1YDL074C NBA1Q08229 501 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C HNT3Q08702 217 aa1.96□□□□□ -2.1
BRE1YDL074C HSP33Q08914 237 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C HSP32Q08992 237 aa1.96□□□□□ -2.1
BRE1YDL074C PFA4Q12006 378 aa1.96□□□□□ -2.1
BRE1YDL074C DAP1Q12091 152 aa1.96□□□□□ -2.1
BRE1YDL074C RTC5Q12108 567 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C YDL211CQ12121 372 aa1.96□□□□□ -2.1
BRE1YDL074C BAG7Q12128 409 aa1.96□□□□□ -2.1
BRE1YDL074C YDR061WQ12298 539 aa1.96□□□□□ -2.1
BRE1YDL074C YPR1Q12458 312 aa1.96□□□□□ -2.1
BRE1YDL074C HRP1Q99383 534 aaKnown RBP1.96□□□□□ -2.1
BRE1YDL074C FAB1P34756 2278 aa1.95□□□□□ -2.1
BRE1YDL074C GAL4P04386 881 aa1.95□□□□□ -2.1
BRE1YDL074C SIR2P06700 562 aa1.95□□□□□ -2.1
BRE1YDL074C COX9P07255 59 aa1.95□□□□□ -2.1
BRE1YDL074C RPC40P07703 335 aaKnown RBP1.95□□□□□ -2.1
BRE1YDL074C PET122P10355 254 aa1.95□□□□□ -2.1
BRE1YDL074C SAR1P20606 190 aaKnown RBP1.95□□□□□ -2.1
BRE1YDL074C NUP1P20676 1076 aa1.95□□□□□ -2.1
BRE1YDL074C DIT1P21623 536 aa1.95□□□□□ -2.1
BRE1YDL074C EXG1P23776 448 aaKnown RBP1.95□□□□□ -2.1
BRE1YDL074C YCR016WP25617 290 aaKnown RBP1.95□□□□□ -2.1
BRE1YDL074C FUN26P31381 517 aa1.95□□□□□ -2.1
BRE1YDL074C DOA4P32571 926 aa1.95□□□□□ -2.1
BRE1YDL074C ARC19P33204 171 aaKnown RBP1.95□□□□□ -2.1
BRE1YDL074C SKN1P33336 771 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms