RNA–Protein interactions for RNA: YCR006C

YCR006C, Transcript of Dubious open reading frame, yeast

Gene YCR006C, Length 474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR006C	YCR006C	FAR8	Q05040	523 aa		4.76	□□□□□ -1.65
YCR006C	YCR006C	SPH1	Q06160	661 aa		4.76	□□□□□ -1.65
YCR006C	YCR006C	YRM1	Q12340	786 aa		4.76	□□□□□ -1.65
YCR006C	YCR006C	UTP10	P42945	1769 aa	Known RBP	4.76	□□□□□ -1.65
YCR006C	YCR006C	TRP1	P00912	224 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	HHF1	P02309	103 aa	Known RBP	4.75	□□□□□ -1.65
YCR006C	YCR006C	SSC1	P0CS90	654 aa	Known RBP	4.75	□□□□□ -1.65
YCR006C	YCR006C	COQ1	P18900	473 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	SAG1	P20840	650 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	MAK31	P23059	88 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	MSK1	P32048	576 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	PHA2	P32452	334 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	TOA1	P32773	286 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	TOA2	P32774	122 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	YHR218W	P38899	603 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	PES4	P39684	611 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	YIL029C	P40538	142 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	TMA22	P47089	198 aa	Predicted RBP	4.75	□□□□□ -1.65
YCR006C	YCR006C	RRN9	P53437	365 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	RET3	P53600	189 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	YMR310C	Q04867	317 aa	Predicted RBP	4.75	□□□□□ -1.65
YCR006C	YCR006C	PBA1	Q05778	276 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	MDM36	Q06820	579 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	HIF1	Q12373	385 aa		4.75	□□□□□ -1.65
YCR006C	YCR006C	MAS1	P10507	462 aa		4.74	□□□□□ -1.65
YCR006C	YCR006C	VPS1	P21576	704 aa	Known RBP	4.74	□□□□□ -1.65
YCR006C	YCR006C	VPH2	P32341	215 aa		4.74	□□□□□ -1.65
YCR006C	YCR006C	SRB2	P34162	210 aa		4.74	□□□□□ -1.65
YCR006C	YCR006C	PTK1	P36002	662 aa	Predicted RBP	4.74	□□□□□ -1.65
YCR006C	YCR006C	MYO3	P36006	1272 aa		4.74	□□□□□ -1.65
YCR006C	YCR006C	RCK2	P38623	610 aa		4.74	□□□□□ -1.65
YCR006C	YCR006C	INA22	P40576	216 aa		4.74	□□□□□ -1.65
YCR006C	YCR006C	GCN20	P43535	752 aa	Known RBP	4.74	□□□□□ -1.65
YCR006C	YCR006C	MTM1	P53320	366 aa		4.74	□□□□□ -1.65
YCR006C	YCR006C	CYC3	P06182	269 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	PHO2	P07269	559 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	MRPL8	P22353	238 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	CPR3	P25719	182 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	HMX1	P32339	317 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	EFB1	P32471	206 aa	Known RBP	4.73	□□□□□ -1.65
YCR006C	YCR006C	SSE1	P32589	693 aa	Known RBP	4.73	□□□□□ -1.65
YCR006C	YCR006C	YBL059W	P34224	193 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	SBE22	P38814	852 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	LYS12	P40495	371 aa	Known RBP	4.73	□□□□□ -1.65
YCR006C	YCR006C	TRM112	P53738	135 aa	Predicted RBP	4.73	□□□□□ -1.65
YCR006C	YCR006C	NUP116	Q02630	1113 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	CSM3	Q04659	317 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	RTT103	Q05543	409 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	YLR177W	Q06251	628 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	ATG17	Q06410	417 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	ERV2	Q12284	196 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	IES3	Q12345	250 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	YOR012W	Q12351	137 aa		4.73	□□□□□ -1.65
YCR006C	YCR006C	SPT15	P13393	240 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	DBR1	P24309	405 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	DEG1	P31115	442 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	RPS0A	P32905	252 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	GEP4	P38812	185 aa		4.72	□□□□□ -1.65
YCR006C	YCR006C	NDT80	P38830	627 aa		4.72	□□□□□ -1.65
YCR006C	YCR006C	PTH1	P38876	190 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	SMX2	P40204	77 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	SEC27	P41811	889 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	SPG5	P42933	373 aa		4.72	□□□□□ -1.65
YCR006C	YCR006C	MRM2	P53123	320 aa		4.72	□□□□□ -1.65
YCR006C	YCR006C	COS1	P53822	381 aa		4.72	□□□□□ -1.65
YCR006C	YCR006C	CWC25	P53854	179 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	ELP3	Q02908	557 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	MYO5	Q04439	1219 aa	Known RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	DIB1	Q06819	143 aa	Predicted RBP	4.72	□□□□□ -1.65
YCR006C	YCR006C	LOT6	Q07923	191 aa		4.72	□□□□□ -1.65
YCR006C	YCR006C	GLE1	Q12315	538 aa		4.72	□□□□□ -1.65
YCR006C	YCR006C	OCA6	Q12454	224 aa		4.72	□□□□□ -1.65
YCR006C	YCR006C	FSH3	Q99369	266 aa		4.72	□□□□□ -1.65
YCR006C	YCR006C	MAS2	P11914	482 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	CLN3	P13365	580 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	MRPL25	P23369	157 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	KAR9	P32526	644 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	MNS1	P32906	549 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
YCR006C	YCR006C	RPC25	P35718	212 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	YBR139W	P38109	508 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	GPX2	P38143	162 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	MMS21	P38632	267 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	YNL320W	P42840	284 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	SCS3	P53012	380 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	TAF6	P53040	516 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	BOR1	P53838	576 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	MTQ1	P53944	314 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	PRM6	Q04705	352 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	YOR387C	Q08910	206 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	RTC5	Q12108	567 aa	Known RBP	4.71	□□□□□ -1.66
YCR006C	YCR006C	AHC1	Q12433	566 aa		4.71	□□□□□ -1.66
YCR006C	YCR006C	PIS1	P06197	220 aa	Known RBP	4.7	□□□□□ -1.66
YCR006C	YCR006C	YUR1	P26725	428 aa		4.7	□□□□□ -1.66
YCR006C	YCR006C	POP5	P28005	173 aa		4.7	□□□□□ -1.66
YCR006C	YCR006C	SUR1	P33300	382 aa		4.7	□□□□□ -1.66
YCR006C	YCR006C	TIR2	P33890	251 aa		4.7	□□□□□ -1.66
YCR006C	YCR006C	HSM3	P38348	480 aa		4.7	□□□□□ -1.66
YCR006C	YCR006C	LCP5	P40079	357 aa	Predicted RBP	4.7	□□□□□ -1.66
YCR006C	YCR006C	IMP4	P53941	290 aa	Known RBP	4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms