RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A TPN1P53099 579 aa2.17□□□□□ -2.06
VMA9YCL005W-A NSA1P53136 463 aaPredicted RBP2.17□□□□□ -2.06
VMA9YCL005W-A PIB2P53191 635 aa2.17□□□□□ -2.06
VMA9YCL005W-A YGR017WP53210 297 aa2.17□□□□□ -2.06
VMA9YCL005W-A POP6P53218 158 aa2.17□□□□□ -2.06
VMA9YCL005W-A YGR042WP53227 271 aa2.17□□□□□ -2.06
VMA9YCL005W-A MAL12P53341 584 aa2.17□□□□□ -2.06
VMA9YCL005W-A ARE2P53629 642 aaKnown RBP2.17□□□□□ -2.06
VMA9YCL005W-A YCL001W-AP87012 153 aa2.17□□□□□ -2.06
VMA9YCL005W-A STP1Q00947 519 aa2.17□□□□□ -2.06
VMA9YCL005W-A TRM44Q02648 567 aaKnown RBP2.17□□□□□ -2.06
VMA9YCL005W-A SMA1Q02651 245 aa2.17□□□□□ -2.06
VMA9YCL005W-A YMD8Q03697 442 aa2.17□□□□□ -2.06
VMA9YCL005W-A HSP31Q04432 237 aa2.17□□□□□ -2.06
VMA9YCL005W-A MYO5Q04439 1219 aaKnown RBP2.17□□□□□ -2.06
VMA9YCL005W-A GPN3Q06543 272 aa2.17□□□□□ -2.06
VMA9YCL005W-A THI20Q08224 551 aa2.17□□□□□ -2.06
VMA9YCL005W-A FRE3Q08905 711 aa2.17□□□□□ -2.06
VMA9YCL005W-A YPL257WQ08974 193 aa2.17□□□□□ -2.06
VMA9YCL005W-A SPC3Q12133 184 aa2.17□□□□□ -2.06
VMA9YCL005W-A RBD2Q12270 262 aa2.17□□□□□ -2.06
VMA9YCL005W-A CRC1Q12289 327 aa2.17□□□□□ -2.06
VMA9YCL005W-A RRD2Q12461 358 aa2.17□□□□□ -2.06
VMA9YCL005W-A SET6Q12529 373 aa2.17□□□□□ -2.06
VMA9YCL005W-A YOL159C-AQ3E769 90 aa2.17□□□□□ -2.06
VMA9YCL005W-A SUS1Q6WNK7 96 aa2.17□□□□□ -2.06
VMA9YCL005W-A SRN2Q99176 213 aa2.17□□□□□ -2.06
VMA9YCL005W-A MTR10Q99189 972 aa2.17□□□□□ -2.06
VMA9YCL005W-A UTP10P42945 1769 aaKnown RBP2.17□□□□□ -2.06
VMA9YCL005W-A SPO14P36126 1683 aa2.16□□□□□ -2.06
VMA9YCL005W-A PUT2P07275 575 aa2.16□□□□□ -2.06
VMA9YCL005W-A SSA3P09435 649 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A YER190C-BP0CX94 160 aa2.16□□□□□ -2.06
VMA9YCL005W-A YEL077W-AP0CX95 160 aa2.16□□□□□ -2.06
VMA9YCL005W-A YGR296C-BP0CX96 160 aa2.16□□□□□ -2.06
VMA9YCL005W-A YPL283W-BP0CX97 160 aa2.16□□□□□ -2.06
VMA9YCL005W-A YPR204C-AP0CX98 160 aa2.16□□□□□ -2.06
VMA9YCL005W-A TCP1P12612 559 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A RPL3P14126 387 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A PDX1P16451 410 aa2.16□□□□□ -2.06
VMA9YCL005W-A FUS3P16892 353 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A GRX2P17695 143 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A MET16P18408 261 aaPredicted RBP2.16□□□□□ -2.06
VMA9YCL005W-A CCA1P21269 546 aa2.16□□□□□ -2.06
VMA9YCL005W-A SAN1P22470 610 aa2.16□□□□□ -2.06
VMA9YCL005W-A YCK1P23291 538 aa2.16□□□□□ -2.06
VMA9YCL005W-A PTP1P25044 335 aa2.16□□□□□ -2.06
VMA9YCL005W-A YCR006CP25350 157 aa2.16□□□□□ -2.06
VMA9YCL005W-A PPZ1P26570 692 aa2.16□□□□□ -2.06
VMA9YCL005W-A COQ3P27680 312 aa2.16□□□□□ -2.06
VMA9YCL005W-A CIN8P27895 1000 aa2.16□□□□□ -2.06
VMA9YCL005W-A UBC8P28263 218 aa2.16□□□□□ -2.06
VMA9YCL005W-A YIM1P28625 365 aa2.16□□□□□ -2.06
VMA9YCL005W-A IDH1P28834 360 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
VMA9YCL005W-A ERG9P29704 444 aa2.16□□□□□ -2.06
VMA9YCL005W-A RIM1P32445 135 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A PHA2P32452 334 aa2.16□□□□□ -2.06
VMA9YCL005W-A SRB5P32585 307 aa2.16□□□□□ -2.06
VMA9YCL005W-A MUD1P32605 298 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A UTR4P32626 227 aa2.16□□□□□ -2.06
VMA9YCL005W-A CDC13P32797 924 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A RGT1P32862 1170 aa2.16□□□□□ -2.06
VMA9YCL005W-A PPQ1P32945 549 aa2.16□□□□□ -2.06
VMA9YCL005W-A SIP2P34164 415 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A SSS1P35179 80 aa2.16□□□□□ -2.06
VMA9YCL005W-A SNU114P36048 1008 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A ALY1P36117 915 aa2.16□□□□□ -2.06
VMA9YCL005W-A MRPL4P36517 319 aa2.16□□□□□ -2.06
VMA9YCL005W-A RRN10P38204 145 aa2.16□□□□□ -2.06
VMA9YCL005W-A MBA1P38300 278 aa2.16□□□□□ -2.06
VMA9YCL005W-A SHG1P38337 142 aa2.16□□□□□ -2.06
VMA9YCL005W-A ARN1P38731 627 aa2.16□□□□□ -2.06
VMA9YCL005W-A YHR054CP38780 354 aa2.16□□□□□ -2.06
VMA9YCL005W-A IKI1P38874 309 aa2.16□□□□□ -2.06
VMA9YCL005W-A AIM18P38884 321 aa2.16□□□□□ -2.06
VMA9YCL005W-A IPT1P38954 527 aa2.16□□□□□ -2.06
VMA9YCL005W-A UME6P39001 836 aa2.16□□□□□ -2.06
VMA9YCL005W-A FHL1P39521 936 aa2.16□□□□□ -2.06
VMA9YCL005W-A NPR2P39923 615 aa2.16□□□□□ -2.06
VMA9YCL005W-A SCC4P40090 624 aa2.16□□□□□ -2.06
VMA9YCL005W-A YMR147WP40218 223 aaKnown RBP2.16□□□□□ -2.06
VMA9YCL005W-A PEP8P40335 379 aa2.16□□□□□ -2.06
VMA9YCL005W-A POG1P40473 351 aa2.16□□□□□ -2.06
VMA9YCL005W-A PKP1P40530 394 aa2.16□□□□□ -2.06
VMA9YCL005W-A IST3P40565 148 aaPredicted RBP2.16□□□□□ -2.06
VMA9YCL005W-A YFR020WP43600 232 aa2.16□□□□□ -2.06
VMA9YCL005W-A ASG7P46993 209 aa2.16□□□□□ -2.06
VMA9YCL005W-A RTT101P47050 842 aa2.16□□□□□ -2.06
VMA9YCL005W-A ABM1P47146 123 aa2.16□□□□□ -2.06
VMA9YCL005W-A AAD10P47182 288 aa2.16□□□□□ -2.06
VMA9YCL005W-A AZR1P50080 613 aa2.16□□□□□ -2.06
VMA9YCL005W-A YGL101WP53144 215 aa2.16□□□□□ -2.06
VMA9YCL005W-A ERV14P53173 138 aa2.16□□□□□ -2.06
VMA9YCL005W-A VOA1P53262 265 aa2.16□□□□□ -2.06
VMA9YCL005W-A CLD1P53264 445 aa2.16□□□□□ -2.06
VMA9YCL005W-A RSM27P53305 110 aa2.16□□□□□ -2.06
VMA9YCL005W-A RRN9P53437 365 aa2.16□□□□□ -2.06
VMA9YCL005W-A HHO1P53551 258 aa2.16□□□□□ -2.06
VMA9YCL005W-A BIO4P53630 237 aa2.16□□□□□ -2.06
VMA9YCL005W-A CBK1P53894 756 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms