RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeast

Gene CKS1, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKS1	YBR135W	AHC1	Q12433	566 aa		4.18	□□□□□ -1.74
CKS1	YBR135W	FSH3	Q99369	266 aa		4.18	□□□□□ -1.74
CKS1	YBR135W	PIS1	P06197	220 aa	Known RBP	4.17	□□□□□ -1.74
CKS1	YBR135W	CLN3	P13365	580 aa		4.17	□□□□□ -1.74
CKS1	YBR135W	PET123	P17558	318 aa		4.17	□□□□□ -1.74
CKS1	YBR135W	SRB2	P34162	210 aa		4.17	□□□□□ -1.74
CKS1	YBR135W	SEC9	P40357	651 aa		4.17	□□□□□ -1.74
CKS1	YBR135W	HST1	P53685	503 aa		4.17	□□□□□ -1.74
CKS1	YBR135W	UBX2	Q04228	584 aa		4.17	□□□□□ -1.74
CKS1	YBR135W	QCR6	P00127	147 aa		4.16	□□□□□ -1.74
CKS1	YBR135W	RAD5	P32849	1169 aa	Predicted RBP	4.16	□□□□□ -1.74
CKS1	YBR135W	LIN1	P38852	340 aa	Predicted RBP	4.16	□□□□□ -1.74
CKS1	YBR135W	AIM24	P47127	394 aa		4.16	□□□□□ -1.74
CKS1	YBR135W	GAT3	Q07928	141 aa		4.16	□□□□□ -1.74
CKS1	YBR135W	SGT2	Q12118	346 aa	Known RBP	4.16	□□□□□ -1.74
CKS1	YBR135W	FAS2	P19097	1887 aa	Known RBP	4.15	□□□□□ -1.74
CKS1	YBR135W	NAM2	P11325	894 aa		4.15	□□□□□ -1.75
CKS1	YBR135W	MSI1	P13712	422 aa		4.15	□□□□□ -1.75
CKS1	YBR135W	HXT2	P23585	541 aa		4.15	□□□□□ -1.75
CKS1	YBR135W	SUR1	P33300	382 aa		4.15	□□□□□ -1.75
CKS1	YBR135W	MAM33	P40513	266 aa		4.15	□□□□□ -1.75
CKS1	YBR135W	YGL242C	P53066	181 aa		4.15	□□□□□ -1.75
CKS1	YBR135W	ALF1	P53904	254 aa		4.15	□□□□□ -1.75
CKS1	YBR135W	RTN1	Q04947	295 aa	Known RBP	4.15	□□□□□ -1.75
CKS1	YBR135W	MEX67	Q99257	599 aa	Known RBP	4.15	□□□□□ -1.75
CKS1	YBR135W	YOR338W	Q99326	363 aa		4.15	□□□□□ -1.75
CKS1	YBR135W	SWI1	P09547	1314 aa		4.15	□□□□□ -1.75
CKS1	YBR135W	HKR1	P41809	1802 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	RPB5	P20434	215 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	SSE1	P32589	693 aa	Known RBP	4.14	□□□□□ -1.75
CKS1	YBR135W	CSE2	P33308	149 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	RRF1	P38771	230 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	MST27	P53176	234 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	TIM11	P81449	96 aa	Predicted RBP	4.14	□□□□□ -1.75
CKS1	YBR135W	TRM44	Q02648	567 aa	Known RBP	4.14	□□□□□ -1.75
CKS1	YBR135W	SMP3	Q04174	516 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	RIF2	Q06208	395 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	YDL114W	Q07530	308 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	SHS1	Q07657	551 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	SAC3	P46674	1301 aa		4.14	□□□□□ -1.75
CKS1	YBR135W	FIG2	P25653	1609 aa		4.13	□□□□□ -1.75
CKS1	YBR135W	RPP0	P05317	312 aa	Known RBP	4.13	□□□□□ -1.75
CKS1	YBR135W	CKI1	P20485	582 aa		4.13	□□□□□ -1.75
CKS1	YBR135W	FAR1	P21268	830 aa		4.13	□□□□□ -1.75
CKS1	YBR135W	HAC1	P41546	238 aa		4.13	□□□□□ -1.75
CKS1	YBR135W	YHC3	P47040	408 aa		4.13	□□□□□ -1.75
CKS1	YBR135W	YPR091C	Q06833	770 aa		4.13	□□□□□ -1.75
CKS1	YBR135W	IRC25	Q07951	179 aa		4.13	□□□□□ -1.75
CKS1	YBR135W	RTC5	Q12108	567 aa	Known RBP	4.13	□□□□□ -1.75
CKS1	YBR135W	GLE1	Q12315	538 aa		4.13	□□□□□ -1.75
CKS1	YBR135W	PCL9	Q12477	304 aa		4.13	□□□□□ -1.75
CKS1	YBR135W	FUN26	P31381	517 aa		4.12	□□□□□ -1.75
CKS1	YBR135W	ZUO1	P32527	433 aa	Known RBP	4.12	□□□□□ -1.75
CKS1	YBR135W	SPO23	P33757	523 aa		4.12	□□□□□ -1.75
CKS1	YBR135W	YHR131C	P38835	850 aa		4.12	□□□□□ -1.75
CKS1	YBR135W	ALP1	P38971	573 aa		4.12	□□□□□ -1.75
CKS1	YBR135W	PTI1	P39927	425 aa	Predicted RBP	4.12	□□□□□ -1.75
CKS1	YBR135W	ARR1	Q06596	294 aa		4.12	□□□□□ -1.75
CKS1	YBR135W	JID1	Q12350	301 aa		4.12	□□□□□ -1.75
CKS1	YBR135W	IZH2	Q12442	317 aa		4.12	□□□□□ -1.75
CKS1	YBR135W	HTZ1	Q12692	134 aa	Known RBP	4.12	□□□□□ -1.75
CKS1	YBR135W	TOM1	Q03280	3268 aa		4.11	□□□□□ -1.75
CKS1	YBR135W	ADH2	P00331	348 aa	Known RBP	4.11	□□□□□ -1.75
CKS1	YBR135W	HPR1	P17629	752 aa	Known RBP	4.11	□□□□□ -1.75
CKS1	YBR135W	ISY1	P21374	235 aa	Predicted RBP	4.11	□□□□□ -1.75
CKS1	YBR135W	SWD3	P38123	315 aa		4.11	□□□□□ -1.75
CKS1	YBR135W	YDR089W	P38966	869 aa		4.11	□□□□□ -1.75
CKS1	YBR135W	YMR134W	P40207	237 aa		4.11	□□□□□ -1.75
CKS1	YBR135W	OSW5	P40219	148 aa		4.11	□□□□□ -1.75
CKS1	YBR135W	VPS20	Q04272	221 aa		4.11	□□□□□ -1.75
CKS1	YBR135W	STE23	Q06010	1027 aa		4.11	□□□□□ -1.75
CKS1	YBR135W	CMS1	Q07897	291 aa	Known RBP	4.11	□□□□□ -1.75
CKS1	YBR135W	RRG7	Q08774	242 aa	Predicted RBP	4.11	□□□□□ -1.75
CKS1	YBR135W	PLP2	Q12017	286 aa		4.11	□□□□□ -1.75
CKS1	YBR135W	FCY22	Q12119	530 aa		4.11	□□□□□ -1.75
CKS1	YBR135W	RNR2	P09938	399 aa	Known RBP	4.1	□□□□□ -1.75
CKS1	YBR135W	MRPS5	P33759	307 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	ANR2	P36090	516 aa	Predicted RBP	4.1	□□□□□ -1.75
CKS1	YBR135W	PCH2	P38126	564 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	ECM8	P38246	354 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	YFR057W	P43625	151 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	CTK3	P46963	296 aa	Predicted RBP	4.1	□□□□□ -1.75
CKS1	YBR135W	BNS1	P50084	137 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	YGL114W	P53134	725 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	CLD1	P53264	445 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	YNL146W	P53906	100 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	YMR111C	Q04461	462 aa	Predicted RBP	4.1	□□□□□ -1.75
CKS1	YBR135W	YLH47	Q06493	454 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	MFG1	Q07684	458 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	APC5	Q08683	685 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	RSA1	Q08932	381 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	HRT3	Q12347	344 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	YDL199C	Q12407	687 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	SPO24	Q3E752	67 aa		4.1	□□□□□ -1.75
CKS1	YBR135W	DET1	Q99288	334 aa	Known RBP	4.1	□□□□□ -1.75
CKS1	YBR135W	CDC37	P06101	506 aa	Known RBP	4.09	□□□□□ -1.75
CKS1	YBR135W	GAL3	P13045	520 aa		4.09	□□□□□ -1.75
CKS1	YBR135W	CHA1	P25379	360 aa	Known RBP	4.09	□□□□□ -1.75
CKS1	YBR135W	MXR2	P25566	168 aa		4.09	□□□□□ -1.75
CKS1	YBR135W	PEX32	P38292	413 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms