RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS11BYBR048W PRO3P32263 286 aaKnown RBP3.32□□□□□ -1.88
RPS11BYBR048W HSM3P38348 480 aa3.32□□□□□ -1.88
RPS11BYBR048W HIS2P38635 335 aa3.32□□□□□ -1.88
RPS11BYBR048W YHR035WP38769 630 aa3.32□□□□□ -1.88
RPS11BYBR048W REE1P40893 198 aa3.32□□□□□ -1.88
RPS11BYBR048W AGX1P43567 385 aa3.32□□□□□ -1.88
RPS11BYBR048W NCA3P46955 337 aa3.32□□□□□ -1.88
RPS11BYBR048W CTK3P46963 296 aaPredicted RBP3.32□□□□□ -1.88
RPS11BYBR048W FMP33P46998 180 aa3.32□□□□□ -1.88
RPS11BYBR048W LSG1P53145 640 aaKnown RBP3.32□□□□□ -1.88
RPS11BYBR048W MST27P53176 234 aa3.32□□□□□ -1.88
RPS11BYBR048W CLD1P53264 445 aa3.32□□□□□ -1.88
RPS11BYBR048W CWC25P53854 179 aaKnown RBP3.32□□□□□ -1.88
RPS11BYBR048W NUP116Q02630 1113 aa3.32□□□□□ -1.88
RPS11BYBR048W YMR317WQ04893 1140 aa3.32□□□□□ -1.88
RPS11BYBR048W YPR091CQ06833 770 aa3.32□□□□□ -1.88
RPS11BYBR048W YLL007CQ07799 665 aa3.32□□□□□ -1.88
RPS11BYBR048W CMS1Q07897 291 aaKnown RBP3.32□□□□□ -1.88
RPS11BYBR048W FCY22Q12119 530 aa3.32□□□□□ -1.88
RPS11BYBR048W STU1P38198 1513 aa3.32□□□□□ -1.88
RPS11BYBR048W TRM732Q03496 1420 aa3.31□□□□□ -1.88
RPS11BYBR048W STH1P32597 1359 aa3.31□□□□□ -1.88
RPS11BYBR048W ATP6P00854 259 aa3.31□□□□□ -1.88
RPS11BYBR048W HEM4P06174 275 aa3.31□□□□□ -1.88
RPS11BYBR048W MSI1P13712 422 aa3.31□□□□□ -1.88
RPS11BYBR048W RSR1P13856 272 aa3.31□□□□□ -1.88
RPS11BYBR048W RPL16AP26784 199 aaKnown RBP3.31□□□□□ -1.88
RPS11BYBR048W DEG1P31115 442 aaKnown RBP3.31□□□□□ -1.88
RPS11BYBR048W AGA1P32323 725 aa3.31□□□□□ -1.88
RPS11BYBR048W COT1P32798 439 aa3.31□□□□□ -1.88
RPS11BYBR048W CTM1P38818 585 aa3.31□□□□□ -1.88
RPS11BYBR048W LSM12P38828 187 aaKnown RBP3.31□□□□□ -1.88
RPS11BYBR048W WWM1P43582 211 aaKnown RBP3.31□□□□□ -1.88
RPS11BYBR048W YAR1P46683 200 aa3.31□□□□□ -1.88
RPS11BYBR048W LCB3P47013 409 aa3.31□□□□□ -1.88
RPS11BYBR048W YJR030CP47101 745 aa3.31□□□□□ -1.88
RPS11BYBR048W KEL2P50090 882 aa3.31□□□□□ -1.88
RPS11BYBR048W KAP114P53067 1004 aa3.31□□□□□ -1.88
RPS11BYBR048W CWC22P53333 577 aaKnown RBP3.31□□□□□ -1.88
RPS11BYBR048W YNL050CP53952 270 aa3.31□□□□□ -1.88
RPS11BYBR048W RTN1Q04947 295 aaKnown RBP3.31□□□□□ -1.88
RPS11BYBR048W YLR173WQ06247 608 aa3.31□□□□□ -1.88
RPS11BYBR048W YLR012CQ07927 99 aa3.31□□□□□ -1.88
RPS11BYBR048W MON2P48563 1636 aaPredicted RBP3.3□□□□□ -1.88
RPS11BYBR048W PEP1P32319 1579 aa3.3□□□□□ -1.88
RPS11BYBR048W MYO4P32492 1471 aa3.3□□□□□ -1.88
RPS11BYBR048W IKI3Q06706 1349 aaKnown RBP3.3□□□□□ -1.88
RPS11BYBR048W RPS18AP0CX55 146 aaKnown RBP3.3□□□□□ -1.88
RPS11BYBR048W RPS18BP0CX56 146 aaPredicted RBP3.3□□□□□ -1.88
RPS11BYBR048W UNG1P12887 359 aa3.3□□□□□ -1.88
RPS11BYBR048W HPR1P17629 752 aaKnown RBP3.3□□□□□ -1.88
RPS11BYBR048W DAL2P25335 343 aa3.3□□□□□ -1.88
RPS11BYBR048W CHA1P25379 360 aaKnown RBP3.3□□□□□ -1.88
RPS11BYBR048W POP5P28005 173 aa3.3□□□□□ -1.88
RPS11BYBR048W ARO2P28777 376 aaKnown RBP3.3□□□□□ -1.88
RPS11BYBR048W ANR2P36090 516 aaPredicted RBP3.3□□□□□ -1.88
RPS11BYBR048W BFR1P38934 470 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
RPS11BYBR048W FHL1P39521 936 aa3.3□□□□□ -1.88
RPS11BYBR048W HAC1P41546 238 aa3.3□□□□□ -1.88
RPS11BYBR048W MRX5P47007 382 aa3.3□□□□□ -1.88
RPS11BYBR048W LIA1P47120 325 aaKnown RBP3.3□□□□□ -1.88
RPS11BYBR048W SCS3P53012 380 aa3.3□□□□□ -1.88
RPS11BYBR048W SRL4Q03085 281 aa3.3□□□□□ -1.88
RPS11BYBR048W BOP2Q06150 570 aa3.3□□□□□ -1.88
RPS11BYBR048W GMC2Q06201 188 aa3.3□□□□□ -1.88
RPS11BYBR048W BER1Q06688 274 aaKnown RBP3.3□□□□□ -1.88
RPS11BYBR048W YDL109CQ12103 647 aa3.3□□□□□ -1.88
RPS11BYBR048W MED4Q12343 284 aa3.3□□□□□ -1.88
RPS11BYBR048W YDL199CQ12407 687 aa3.3□□□□□ -1.88
RPS11BYBR048W PRP46Q12417 451 aaPredicted RBP3.3□□□□□ -1.88
RPS11BYBR048W HIR3P47171 1648 aa3.3□□□□□ -1.88
RPS11BYBR048W HHF1P02309 103 aaKnown RBP3.29□□□□□ -1.88
RPS11BYBR048W RAD7P06779 565 aa3.29□□□□□ -1.88
RPS11BYBR048W MSF1P08425 469 aa3.29□□□□□ -1.88
RPS11BYBR048W SPT15P13393 240 aaKnown RBP3.29□□□□□ -1.88
RPS11BYBR048W CSM1P25651 190 aa3.29□□□□□ -1.88
RPS11BYBR048W ICL1P28240 557 aaPredicted RBP3.29□□□□□ -1.88
RPS11BYBR048W SPR1P32603 445 aa3.29□□□□□ -1.88
RPS11BYBR048W GCG1P32656 232 aaKnown RBP3.29□□□□□ -1.88
RPS11BYBR048W RCK2P38623 610 aa3.29□□□□□ -1.88
RPS11BYBR048W DSE1P40077 573 aa3.29□□□□□ -1.88
RPS11BYBR048W GCN20P43535 752 aaKnown RBP3.29□□□□□ -1.88
RPS11BYBR048W AGP3P43548 558 aa3.29□□□□□ -1.88
RPS11BYBR048W PMT4P46971 762 aa3.29□□□□□ -1.88
RPS11BYBR048W SEH1P53011 349 aaKnown RBP3.29□□□□□ -1.88
RPS11BYBR048W YPL077CQ02831 240 aa3.29□□□□□ -1.88
RPS11BYBR048W IRC4Q03036 179 aa3.29□□□□□ -1.88
RPS11BYBR048W CWC21Q03375 135 aaKnown RBP3.29□□□□□ -1.88
RPS11BYBR048W TRM82Q03774 444 aa3.29□□□□□ -1.88
RPS11BYBR048W PBA1Q05778 276 aa3.29□□□□□ -1.88
RPS11BYBR048W TSR1Q07381 788 aaKnown RBP3.29□□□□□ -1.88
RPS11BYBR048W NDD1Q08887 554 aa3.29□□□□□ -1.88
RPS11BYBR048W FDH1Q08911 376 aa3.29□□□□□ -1.88
RPS11BYBR048W SLM3Q12093 417 aa3.29□□□□□ -1.88
RPS11BYBR048W JID1Q12350 301 aa3.29□□□□□ -1.88
RPS11BYBR048W RPN6Q12377 434 aa3.29□□□□□ -1.88
RPS11BYBR048W REV3P14284 1504 aa3.29□□□□□ -1.88
RPS11BYBR048W SAL1D6W196 494 aa3.28□□□□□ -1.88
RPS11BYBR048W COX2P00410 251 aa3.28□□□□□ -1.88
RPS11BYBR048W REP1P03871 373 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms