RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W SIR3P06701 978 aa3.17□□□□□ -1.9
NUP60YAR002W TFS1P14306 219 aa3.17□□□□□ -1.9
NUP60YAR002W KGD1P20967 1014 aaKnown RBP3.17□□□□□ -1.9
NUP60YAR002W IDP1P21954 428 aaKnown RBP3.17□□□□□ -1.9
NUP60YAR002W BUD5P25300 642 aaPredicted RBP3.17□□□□□ -1.9
NUP60YAR002W SSH4P32343 579 aa3.17□□□□□ -1.9
NUP60YAR002W NTH1P32356 751 aa3.17□□□□□ -1.9
NUP60YAR002W ERG1P32476 496 aaKnown RBP3.17□□□□□ -1.9
NUP60YAR002W RML2P32611 393 aa3.17□□□□□ -1.9
NUP60YAR002W SFC1P33303 322 aa3.17□□□□□ -1.9
NUP60YAR002W TUL1P36096 758 aa3.17□□□□□ -1.9
NUP60YAR002W RRP3P38712 501 aaKnown RBP3.17□□□□□ -1.9
NUP60YAR002W BIG1P38813 335 aa3.17□□□□□ -1.9
NUP60YAR002W PEX18P38855 283 aa3.17□□□□□ -1.9
NUP60YAR002W DDI1P40087 428 aa3.17□□□□□ -1.9
NUP60YAR002W GPP2P40106 250 aaKnown RBP3.17□□□□□ -1.9
NUP60YAR002W YJL068CP40363 299 aa3.17□□□□□ -1.9
NUP60YAR002W YJR120WP47157 116 aa3.17□□□□□ -1.9
NUP60YAR002W UBC11P52492 156 aa3.17□□□□□ -1.9
NUP60YAR002W YGR168CP53293 376 aa3.17□□□□□ -1.9
NUP60YAR002W SUN4P53616 420 aa3.17□□□□□ -1.9
NUP60YAR002W TPS1Q00764 495 aaKnown RBP3.17□□□□□ -1.9
NUP60YAR002W CIK1Q01649 594 aa3.17□□□□□ -1.9
NUP60YAR002W NUP49Q02199 472 aa3.17□□□□□ -1.9
NUP60YAR002W KRE28Q04431 385 aa3.17□□□□□ -1.9
NUP60YAR002W ERB1Q04660 807 aaKnown RBP3.17□□□□□ -1.9
NUP60YAR002W IRC13Q08630 104 aa3.17□□□□□ -1.9
NUP60YAR002W DIN7Q12086 430 aa3.17□□□□□ -1.9
NUP60YAR002W YPR022CQ12139 1133 aa3.17□□□□□ -1.9
NUP60YAR002W SIA1Q12212 622 aa3.17□□□□□ -1.9
NUP60YAR002W RBD2Q12270 262 aa3.17□□□□□ -1.9
NUP60YAR002W PNS1Q12412 539 aa3.17□□□□□ -1.9
NUP60YAR002W YLR111WQ12528 110 aa3.17□□□□□ -1.9
NUP60YAR002W PNO1Q99216 274 aaKnown RBP3.17□□□□□ -1.9
NUP60YAR002W FRS1P15624 595 aaKnown RBP3.16□□□□□ -1.9
NUP60YAR002W FUR1P18562 216 aaKnown RBP3.16□□□□□ -1.9
NUP60YAR002W BUB3P26449 341 aa3.16□□□□□ -1.9
NUP60YAR002W ASF2P32448 525 aaPredicted RBP3.16□□□□□ -1.9
NUP60YAR002W HIS7P33734 552 aaKnown RBP3.16□□□□□ -1.9
NUP60YAR002W DOA1P36037 715 aa3.16□□□□□ -1.9
NUP60YAR002W TCD2P36101 447 aaKnown RBP3.16□□□□□ -1.9
NUP60YAR002W FMP23P38231 175 aa3.16□□□□□ -1.9
NUP60YAR002W SBE22P38814 852 aa3.16□□□□□ -1.9
NUP60YAR002W MET28P40573 187 aa3.16□□□□□ -1.9
NUP60YAR002W PAC11P40960 533 aa3.16□□□□□ -1.9
NUP60YAR002W SNM1P40993 198 aa3.16□□□□□ -1.9
NUP60YAR002W ZIM17P42844 174 aa3.16□□□□□ -1.9
NUP60YAR002W STB1P42845 420 aa3.16□□□□□ -1.9
NUP60YAR002W NIT2P47016 307 aa3.16□□□□□ -1.9
NUP60YAR002W YJL055WP47044 245 aa3.16□□□□□ -1.9
NUP60YAR002W HMS2P47175 358 aa3.16□□□□□ -1.9
NUP60YAR002W YGR250CP53316 781 aaKnown RBP3.16□□□□□ -1.9
NUP60YAR002W RHO4Q00246 291 aa3.16□□□□□ -1.9
NUP60YAR002W YSA1Q01976 231 aa3.16□□□□□ -1.9
NUP60YAR002W MAK3Q03503 176 aa3.16□□□□□ -1.9
NUP60YAR002W GRX3Q03835 250 aa3.16□□□□□ -1.9
NUP60YAR002W VBA4Q04602 768 aaKnown RBP3.16□□□□□ -1.9
NUP60YAR002W YMR310CQ04867 317 aaPredicted RBP3.16□□□□□ -1.9
NUP60YAR002W RNH202Q05635 350 aa3.16□□□□□ -1.9
NUP60YAR002W BOP2Q06150 570 aa3.16□□□□□ -1.9
NUP60YAR002W YLR446WQ06204 433 aa3.16□□□□□ -1.9
NUP60YAR002W SRO7Q12038 1033 aa3.16□□□□□ -1.9
NUP60YAR002W MED2Q12124 431 aa3.16□□□□□ -1.9
NUP60YAR002W BSC1Q12140 328 aa3.16□□□□□ -1.9
NUP60YAR002W YDR034W-BQ6Q5X2 51 aa3.16□□□□□ -1.9
NUP60YAR002W STT4P37297 1900 aa3.16□□□□□ -1.9
NUP60YAR002W FAB1P34756 2278 aa3.16□□□□□ -1.9
NUP60YAR002W NFT1P0CE68 1218 aa3.15□□□□□ -1.9
NUP60YAR002W MDH1P17505 334 aaKnown RBP RIP-Chip data3.15□□□□□ -1.9not detected
NUP60YAR002W VPS33P20795 691 aa3.15□□□□□ -1.9
NUP60YAR002W RPL24BP24000 155 aaKnown RBP3.15□□□□□ -1.9
NUP60YAR002W GIT1P25346 518 aa3.15□□□□□ -1.9
NUP60YAR002W OAC1P32332 324 aa3.15□□□□□ -1.9
NUP60YAR002W HIR2P32480 875 aa3.15□□□□□ -1.9
NUP60YAR002W TEF4P36008 412 aaKnown RBP3.15□□□□□ -1.9
NUP60YAR002W DHR2P36009 735 aaPredicted RBP3.15□□□□□ -1.9
NUP60YAR002W SRL3P36167 246 aa3.15□□□□□ -1.9
NUP60YAR002W PIM1P36775 1133 aa3.15□□□□□ -1.9
NUP60YAR002W GPX2P38143 162 aa3.15□□□□□ -1.9
NUP60YAR002W FAT1P38225 669 aa3.15□□□□□ -1.9
NUP60YAR002W FMO1P38866 432 aa3.15□□□□□ -1.9
NUP60YAR002W FMP52P40008 231 aa3.15□□□□□ -1.9
NUP60YAR002W FCY21P40039 528 aa3.15□□□□□ -1.9
NUP60YAR002W GET2P40056 285 aa3.15□□□□□ -1.9
NUP60YAR002W YNL195CP40168 261 aa3.15□□□□□ -1.9
NUP60YAR002W HOC1P47124 396 aa3.15□□□□□ -1.9
NUP60YAR002W JHD2P47156 728 aaPredicted RBP3.15□□□□□ -1.9
NUP60YAR002W CDH1P53197 566 aa3.15□□□□□ -1.9
NUP60YAR002W SYF2P53277 215 aaPredicted RBP3.15□□□□□ -1.9
NUP60YAR002W YAP1802P53309 568 aa3.15□□□□□ -1.9
NUP60YAR002W CPR8P53728 308 aa3.15□□□□□ -1.9
NUP60YAR002W MTQ1P53944 314 aa3.15□□□□□ -1.9
NUP60YAR002W RHO3Q00245 231 aaKnown RBP3.15□□□□□ -1.9
NUP60YAR002W SNZ1Q03148 297 aa3.15□□□□□ -1.9
NUP60YAR002W ABZ2Q03266 374 aa3.15□□□□□ -1.9
NUP60YAR002W URC2Q04411 772 aa3.15□□□□□ -1.9
NUP60YAR002W RSF1Q05043 376 aa3.15□□□□□ -1.9
NUP60YAR002W NGL1Q08213 363 aaKnown RBP3.15□□□□□ -1.9
NUP60YAR002W RCN2Q12044 265 aa3.15□□□□□ -1.9
NUP60YAR002W SKS1Q12505 502 aa3.15□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms