RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 UNC45AQ9H3U1 944 aa16.54■□□□□ 0.24
TARDBP-231ENST00000639599 PCDHA4Q9UN74 947 aa16.54■□□□□ 0.24
TARDBP-231ENST00000639599 NCOR1O75376 2440 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 MARCH6O60337 910 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 CDKL5O76039 1030 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 EYA4O95677 639 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 SFPQP23246 707 aaKnown RBP eCLIP16.53■□□□□ 0.24
TARDBP-231ENST00000639599 TMC7Q7Z402 723 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 BLIDQ8IZY5 108 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 MRPS27Q92552 414 aaKnown RBP16.53■□□□□ 0.24
TARDBP-231ENST00000639599 LENG9Q96B70 501 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 MSLNLQ96KJ4 702 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 JPH2Q9BR39 696 aaPredicted RBP16.53■□□□□ 0.24
TARDBP-231ENST00000639599 MRPL9Q9BYD2 267 aaKnown RBP16.53■□□□□ 0.24
TARDBP-231ENST00000639599 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
TARDBP-231ENST00000639599 NGRNQ9NPE2 291 aaKnown RBP16.53■□□□□ 0.24
TARDBP-231ENST00000639599 LZTS1Q9Y250 596 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 USP15Q9Y4E8 981 aaPredicted RBP16.53■□□□□ 0.24
TARDBP-231ENST00000639599 PCDHGC5Q9Y5F6 944 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 TTC3P53804 2025 aa16.53■□□□□ 0.24
TARDBP-231ENST00000639599 TRANK1O15050 2925 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 ADAMTS3O15072 1205 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 DARSP14868 501 aaKnown RBP16.52■□□□□ 0.24
TARDBP-231ENST00000639599 GPC3P51654 580 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 FAM189BP81408 668 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 STK3Q13188 491 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 NONOQ15233 471 aaKnown RBP eCLIP16.52■□□□□ 0.24
TARDBP-231ENST00000639599 NTRK3Q16288 839 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 Q4G0T1 1027 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 XKR3Q5GH77 459 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 GALNT17Q6IS24 598 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 LLGL2Q6P1M3 1020 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 KCNT2Q6UVM3 1135 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 ZBTB33Q86T24 672 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 ECHDC2Q86YB7 292 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 SLC5A5Q92911 643 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 RPGRIP1Q96KN7 1286 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 PHF7Q9BWX1 381 aaPredicted RBP16.52■□□□□ 0.24
TARDBP-231ENST00000639599 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.24
TARDBP-231ENST00000639599 SPG21Q9NZD8 308 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 CLEC1BQ9P126 229 aa16.52■□□□□ 0.24
TARDBP-231ENST00000639599 CCDC194A0A1B0GVG4 234 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 CARNS1A5YM72 827 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 ZNF862O60290 1169 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 DKC1O60832 514 aaKnown RBP eCLIP16.51■□□□□ 0.23
TARDBP-231ENST00000639599 SKIP12755 728 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 TECP42680 631 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 ALDH7A1P49419 539 aaKnown RBP16.51■□□□□ 0.23
TARDBP-231ENST00000639599 PLCB3Q01970 1234 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 DSC3Q14574 896 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 DUSP6Q16828 381 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 HERC4Q5GLZ8 1057 aaPredicted RBP16.51■□□□□ 0.23
TARDBP-231ENST00000639599 TWF2Q6IBS0 349 aaKnown RBP16.51■□□□□ 0.23
TARDBP-231ENST00000639599 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 ADAMTS10Q9H324 1103 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 CWH43Q9H720 699 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 HCSTQ9UBK5 93 aa16.51■□□□□ 0.23
TARDBP-231ENST00000639599 DDX25Q9UHL0 483 aaKnown RBP16.51■□□□□ 0.23
TARDBP-231ENST00000639599 EPB41L2O43491 1005 aaKnown RBP16.5■□□□□ 0.23
TARDBP-231ENST00000639599 TDP2O95551 362 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 EOMESO95936 686 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 FGFR4P22455 802 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-231ENST00000639599 ERVFC1P60507 584 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 SMC1AQ14683 1233 aaKnown RBP16.5■□□□□ 0.23
TARDBP-231ENST00000639599 UGCGQ16739 394 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 LETM2Q2VYF4 491 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 SUGP1Q8IWZ8 645 aaKnown RBP16.5■□□□□ 0.23
TARDBP-231ENST00000639599 FAM177A1Q8N128 213 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-231ENST00000639599 HELQQ8TDG4 1101 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 RSPH1Q8WYR4 309 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 ZNF274Q96GC6 653 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-231ENST00000639599 TMEM169Q96HH4 297 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 CASD1Q96PB1 797 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 KCNH6Q9H252 994 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 PDRG1Q9NUG6 133 aa16.5■□□□□ 0.23
TARDBP-231ENST00000639599 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 GLP2RO95838 553 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 NEFLP07196 543 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 EVCP57679 992 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 PSMC5P62195 406 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 TPRNQ4KMQ1 711 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 ZNF410Q86VK4 478 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 RHPN2Q8IUC4 686 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 EXOC8Q8IYI6 725 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 LINC01465Q8N7H1 131 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 SLC7A3Q8WY07 619 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 EDAQ92838 391 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 CASP10Q92851 521 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 GJA10Q969M2 543 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 NLRP4Q96MN2 994 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 CHST12Q9NRB3 414 aa16.49■□□□□ 0.23
TARDBP-231ENST00000639599 SUCLA2Q9P2R7 463 aaPredicted RBP16.49■□□□□ 0.23
TARDBP-231ENST00000639599 PIN4Q9Y237 131 aaKnown RBP16.49■□□□□ 0.23
TARDBP-231ENST00000639599 BRWD1Q9NSI6 2320 aa16.48■□□□□ 0.23
TARDBP-231ENST00000639599 A0A0U1RQF3 1178 aa16.48■□□□□ 0.23
TARDBP-231ENST00000639599 FSCN2O14926 492 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms