RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 COBLO75128 1261 aa12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 RARBP10826 455 aa12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 ADKP55263 362 aaKnown RBP12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 TMEM62Q0P6H9 643 aa12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 KYNUQ16719 465 aa12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 ARHGAP9Q9BRR9 750 aa12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 AAASQ9NRG9 546 aa12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 RUVBL2Q9Y230 463 aaKnown RBP12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 KCNA6P17658 529 aa12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 FAM160B2Q86V87 743 aa12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 RNF135Q8IUD6 432 aa12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.84□□□□□ -0.35
SLC6A6-204ENST00000613060 CAND2O75155 1236 aa12.83□□□□□ -0.35
SLC6A6-204ENST00000613060 HSPA4LO95757 839 aa12.83□□□□□ -0.35
SLC6A6-204ENST00000613060 CLTAP09496 248 aa12.83□□□□□ -0.35
SLC6A6-204ENST00000613060 BMP3P12645 472 aa12.83□□□□□ -0.35
SLC6A6-204ENST00000613060 DDIT3P35638 169 aa12.83□□□□□ -0.35
SLC6A6-204ENST00000613060 PLEKHM3Q6ZWE6 761 aa12.83□□□□□ -0.35
SLC6A6-204ENST00000613060 CSGALNACT1Q8TDX6 532 aa12.83□□□□□ -0.35
SLC6A6-204ENST00000613060 GIMAP4Q9NUV9 329 aa12.83□□□□□ -0.35
SLC6A6-204ENST00000613060 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 MMS22LQ6ZRQ5 1243 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 DNAJB2P25686 324 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 ALCAMQ13740 583 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 CYP4F22Q6NT55 531 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 BRINP3Q76B58 766 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 CCDC197Q8NCU1 140 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 FAM167AQ96KS9 214 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 SPATA33Q96N06 139 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 APOL5Q9BWW9 433 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 KLHL25Q9H0H3 589 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 DHX36Q9H2U1 1008 aaKnown RBP12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 FGFR1OP2Q9NVK5 253 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 SNUPNO95149 360 aaKnown RBP12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 SKIP12755 728 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 COMMD2Q86X83 199 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 PPP1R13BQ96KQ4 1090 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 DDX50Q9BQ39 737 aaKnown RBP12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 PCDHGB4Q9UN71 923 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 BLMP54132 1417 aaPredicted RBP12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 WBP4O75554 376 aaKnown RBP12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 CLUP10909 449 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 ALDH1A3P47895 512 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 LARP4BQ92615 738 aaKnown RBP12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 MSTO1Q9BUK6 570 aa12.83□□□□□ -0.36
SLC6A6-204ENST00000613060 SYCE1LA8MT33 242 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 USP17L8P0C7I0 530 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 TSPYL6Q8N831 410 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 ZNF512Q96ME7 567 aaPredicted RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 UNC45AQ9H3U1 944 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 GALNT8Q9NY28 637 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 DDX56Q9NY93 547 aaKnown RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 ITIH6Q6UXX5 1313 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 GOLGA8IPA6NC78 632 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 GOLGA8JA6NMD2 632 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 GOLGA8MH3BSY2 632 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 CACNB3P54284 484 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 KRT24Q2M2I5 525 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 LDHAP00338 332 aaKnown RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 TNNI3P19429 210 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 NAA30Q147X3 362 aaPredicted RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 ZNF438Q7Z4V0 828 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 KDM4CQ9H3R0 1056 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 FBXO40Q9UH90 709 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 PCDHA5Q9Y5H7 936 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 COPG1Q9Y678 874 aaKnown RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 ZMYM6O95789 1325 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 PRMT3O60678 531 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 PFKFB1P16118 471 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 FCGRTP55899 365 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 LAYNQ6UX15 382 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 GIMAP8Q8ND71 665 aaPredicted RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 CENPTQ96BT3 561 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 ZNF274Q96GC6 653 aaPredicted RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 DNAJC1Q96KC8 554 aaKnown RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 ANGPTL2Q9UKU9 493 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 CDK13Q14004 1512 aaKnown RBP12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 ARHGEF9O43307 516 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 MAP2K2P36507 400 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 OCA2Q04671 838 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 TTLL4Q14679 1199 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 ZNF667Q5HYK9 610 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 CLYBLQ8N0X4 340 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 FOPNLQ96NB1 174 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 KLC2Q9H0B6 622 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 EVA1BQ9NVM1 165 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 SNX5Q9Y5X3 404 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 AFF2P51816 1311 aa12.82□□□□□ -0.36
SLC6A6-204ENST00000613060 SGSM2O43147 1006 aa12.81□□□□□ -0.36
SLC6A6-204ENST00000613060 ATP5JP18859 108 aa12.81□□□□□ -0.36
SLC6A6-204ENST00000613060 SLC16A1P53985 500 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms