RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TGDSO95455 350 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 ALDH2P05091 517 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 GSNP06396 782 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 TSHRP16473 764 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 ALAS2P22557 587 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 TARSP26639 723 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 ABCD1P33897 745 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 HOXD13P35453 343 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 PHKA1P46020 1223 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 SEPHS1P49903 392 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 ITGA8P53708 1063 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 CSE1LP55060 971 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 HMGN5P82970 282 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 ALDH6A1Q02252 535 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 HYAL2Q12891 473 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 TMED1Q13445 227 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 SF1Q15637 639 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 MPEG1Q2M385 716 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 PGS1Q32NB8 556 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 C5orf22Q49AR2 442 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 WIPI1Q5MNZ9 446 aaPredicted RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 ZNF362Q5T0B9 420 aaPredicted RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 UBXN11Q5T124 520 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 TDRD10Q5VZ19 366 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 TRIM68Q6AZZ1 485 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 TTLL7Q6ZT98 887 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 ADAT2Q7Z6V5 191 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 PDZD3Q86UT5 571 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 CPOQ8IVL8 374 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 TMEM192Q8IY95 271 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 CCAR2Q8N163 923 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 MICALL1Q8N3F8 863 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 TDRD7Q8NHU6 1098 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 SPATA18Q8TC71 538 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 HERVK_113Q902F9 699 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 ANP32BQ92688 251 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 APIPQ96GX9 242 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 C1orf159Q96HA4 380 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 CCDC140Q96MF4 163 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 SLC6A18Q96N87 628 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 ZIC5Q96T25 663 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 CNPPD1Q9BV87 410 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 NOL6Q9H6R4 1146 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 TIMMDC1Q9NPL8 285 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 HAUS2Q9NVX0 235 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 OXSMQ9NWU1 459 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 TRMT1Q9NXH9 659 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 H2AFY2Q9P0M6 372 aaPredicted RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 LRFN1Q9P244 771 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 RABL2AQ9UBK7 228 aaPredicted RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 SERPINB13Q9UIV8 391 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 TRIM33Q9UPN9 1127 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 ZNF711Q9Y462 761 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 PCDHA8Q9Y5H6 950 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 PCDHA11Q9Y5I1 949 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 SNX13Q9Y5W8 968 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 PTPDC1A2A3K4 754 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 POM121BA6NF01 834 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 SPATA31C2B4DYI2 1134 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 ARVCFO00192 962 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 ACKR2O00590 384 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 AKR1B10O60218 316 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 PLA2G6O60733 806 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 PPM1BO75688 479 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 GOSR1O95249 250 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 CKMP06732 381 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 THEGLP0DJG4 465 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 KRT10P13645 584 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 YBX3P16989 372 aaKnown RBP eCLIP5.03□□□□□ -1.6
CD44-213ENST00000525209 IL11P20809 199 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 AGXTP21549 392 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 SOX18P35713 384 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 CLCN2P51788 898 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 EVCP57679 992 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 PHC1P78364 1004 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 SRSF11Q05519 484 aaKnown RBP5.03□□□□□ -1.6
CD44-213ENST00000525209 KIAA2012Q0VF49 1180 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 KCNMA1Q12791 1236 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 TRPC3Q13507 836 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 ERV3-1Q14264 604 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 TMEM177Q53S58 311 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 SLC35F1Q5T1Q4 408 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 KAZNQ674X7 775 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 POMZP3Q6PJE2 187 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 FAM47EQ6ZV65 393 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 MAEAQ7L5Y9 396 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 RNF152Q8N8N0 203 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 AVL9Q8NBF6 648 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 TOR1AIP2Q8NFQ8 470 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 DCAF4Q8WV16 495 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 NSUN4Q96CB9 384 aaKnown RBP5.03□□□□□ -1.6
CD44-213ENST00000525209 RCC1LQ96I51 464 aaKnown RBP5.03□□□□□ -1.6
CD44-213ENST00000525209 MOGAT1Q96PD6 335 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 PYM1Q9BRP8 204 aaKnown RBP5.03□□□□□ -1.6
CD44-213ENST00000525209 COLEC11Q9BWP8 271 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 CELF4Q9BZC1 486 aaKnown RBP5.03□□□□□ -1.6
CD44-213ENST00000525209 GBP3Q9H0R5 595 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 C2orf40Q9H1Z8 148 aa5.03□□□□□ -1.6
CD44-213ENST00000525209 EPB41L4AQ9HCS5 686 aaPredicted RBP5.03□□□□□ -1.6
CD44-213ENST00000525209 MBIPQ9NS73 344 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms