RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 NLRP7Q8WX94 980 aa17.76■□□□□ 0.43
GABPA-203ENST00000487266 TMX3Q96JJ7 454 aa17.76■□□□□ 0.43
GABPA-203ENST00000487266 CEP170P1Q96L14 293 aa17.76■□□□□ 0.43
GABPA-203ENST00000487266 COL25A1Q9BXS0 654 aaPredicted RBP17.76■□□□□ 0.43
GABPA-203ENST00000487266 FOXP1Q9H334 677 aaPredicted RBP17.76■□□□□ 0.43
GABPA-203ENST00000487266 THEGQ9P2T0 379 aa17.76■□□□□ 0.43
GABPA-203ENST00000487266 HCSTQ9UBK5 93 aa17.76■□□□□ 0.43
GABPA-203ENST00000487266 PCDHA12Q9UN75 941 aa17.76■□□□□ 0.43
GABPA-203ENST00000487266 MRPL42Q9Y6G3 142 aaKnown RBP17.76■□□□□ 0.43
GABPA-203ENST00000487266 A0A087WWV3 80 aa17.75■□□□□ 0.43
GABPA-203ENST00000487266 EIF4BP23588 611 aaKnown RBP17.75■□□□□ 0.43
GABPA-203ENST00000487266 SARSP49591 514 aaKnown RBP17.75■□□□□ 0.43
GABPA-203ENST00000487266 TFF2Q03403 129 aa17.75■□□□□ 0.43
GABPA-203ENST00000487266 DSC3Q14574 896 aa17.75■□□□□ 0.43
GABPA-203ENST00000487266 ZNF174Q15697 407 aa17.75■□□□□ 0.43
GABPA-203ENST00000487266 RHPN2Q8IUC4 686 aa17.75■□□□□ 0.43
GABPA-203ENST00000487266 C4orf19Q8IY42 314 aa17.75■□□□□ 0.43
GABPA-203ENST00000487266 EIF2AK1Q9BQI3 630 aaKnown RBP17.75■□□□□ 0.43
GABPA-203ENST00000487266 RGS18Q9NS28 235 aa17.75■□□□□ 0.43
GABPA-203ENST00000487266 SUCLA2Q9P2R7 463 aaPredicted RBP17.75■□□□□ 0.43
GABPA-203ENST00000487266 MYO7AQ13402 2215 aa17.75■□□□□ 0.43
GABPA-203ENST00000487266 BRWD1Q9NSI6 2320 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 A0A087WZ62 844 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 C9IYK1 514 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 SLITRK3O94933 977 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 DARSP14868 501 aaKnown RBP17.74■□□□□ 0.43
GABPA-203ENST00000487266 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
GABPA-203ENST00000487266 TTC38Q5R3I4 469 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 FAM102BQ5T8I3 360 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 NOSTRINQ8IVI9 506 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 TMEM143Q96AN5 459 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 NLRP4Q96MN2 994 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 FDXACB1Q9BRP7 624 aaPredicted RBP17.74■□□□□ 0.43
GABPA-203ENST00000487266 ZSWIM4Q9H7M6 989 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 LRFN2Q9ULH4 789 aa17.74■□□□□ 0.43
GABPA-203ENST00000487266 PLXNA4Q9HCM2 1894 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 TCF20Q9UGU0 1960 aaKnown RBP17.73■□□□□ 0.43
GABPA-203ENST00000487266 H3BNC9 293 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 FGFR1P11362 822 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 POLGP54098 1239 aaPredicted RBP17.73■□□□□ 0.43
GABPA-203ENST00000487266 GPM6BQ13491 265 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 EMC2Q15006 297 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 XKR9Q5GH70 373 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 SLC24A5Q71RS6 500 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 CMTR2Q8IYT2 770 aaKnown RBP17.73■□□□□ 0.43
GABPA-203ENST00000487266 HSD17B14Q9BPX1 270 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 DHX33Q9H6R0 707 aaKnown RBP17.73■□□□□ 0.43
GABPA-203ENST00000487266 C1orf112Q9NSG2 853 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 PCDHB7Q9Y5E2 793 aa17.73■□□□□ 0.43
GABPA-203ENST00000487266 DKC1O60832 514 aaKnown RBP eCLIP17.72■□□□□ 0.43
GABPA-203ENST00000487266 OR52Z1P0C646 297 aa17.72■□□□□ 0.43
GABPA-203ENST00000487266 STAG3L1P0CL83 205 aa17.72■□□□□ 0.43
GABPA-203ENST00000487266 ODR4Q5SWX8 454 aa17.72■□□□□ 0.43
GABPA-203ENST00000487266 SLC7A3Q8WY07 619 aa17.72■□□□□ 0.43
GABPA-203ENST00000487266 CLP1Q92989 425 aaKnown RBP17.72■□□□□ 0.43
GABPA-203ENST00000487266 SAMD11Q96NU1 681 aa17.72■□□□□ 0.43
GABPA-203ENST00000487266 XPNPEP1Q9NQW7 623 aa17.72■□□□□ 0.43
GABPA-203ENST00000487266 MUC3AQ02505 3323 aa17.72■□□□□ 0.43
GABPA-203ENST00000487266 TBKBP1A7MCY6 615 aa17.71■□□□□ 0.43
GABPA-203ENST00000487266 GRM6O15303 877 aa17.71■□□□□ 0.43
GABPA-203ENST00000487266 GJB2P29033 226 aa17.71■□□□□ 0.43
GABPA-203ENST00000487266 BMPR1AP36894 532 aa17.71■□□□□ 0.43
GABPA-203ENST00000487266 TECP42680 631 aa17.71■□□□□ 0.43
GABPA-203ENST00000487266 DNM2P50570 870 aa17.71■□□□□ 0.43
GABPA-203ENST00000487266 TOB1P50616 345 aaPredicted RBP17.71■□□□□ 0.43
GABPA-203ENST00000487266 PIGOQ8TEQ8 1089 aa17.71■□□□□ 0.43
GABPA-203ENST00000487266 GCOM2Q9BZD3 368 aaPredicted RBP17.71■□□□□ 0.43
GABPA-203ENST00000487266 RNF19AQ9NV58 838 aa17.71■□□□□ 0.43
GABPA-203ENST00000487266 COL4A3BPQ9Y5P4 624 aa17.71■□□□□ 0.43
GABPA-203ENST00000487266 C5orf67F2Z3F1 127 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 MED24O75448 989 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 SPATA31C1P0DKV0 1188 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 U2AF2P26368 475 aaKnown RBP eCLIP17.7■□□□□ 0.42
GABPA-203ENST00000487266 RFC5P40937 340 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 KCNQ1P51787 676 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 RNF169Q8NCN4 708 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 NEK9Q8TD19 979 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 PRPF31Q8WWY3 499 aaKnown RBP17.7■□□□□ 0.42
GABPA-203ENST00000487266 MRPL38Q96DV4 380 aaKnown RBP17.7■□□□□ 0.42
GABPA-203ENST00000487266 MINDY3Q9H8M7 445 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 IFT122Q9HBG6 1241 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 LMCD1Q9NZU5 365 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 PCDHB6Q9Y5E3 794 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 CUL9Q8IWT3 2517 aa17.7■□□□□ 0.42
GABPA-203ENST00000487266 LYPLA2O95372 231 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 SRGAP2CP0DJJ0 459 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 ZSCAN20P17040 1043 aaPredicted RBP17.69■□□□□ 0.42
GABPA-203ENST00000487266 ATF7P17544 494 aaPredicted RBP17.69■□□□□ 0.42
GABPA-203ENST00000487266 RARRES1P49788 294 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 FAM189BP81408 668 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 TJAP1Q5JTD0 557 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 MCTP1Q6DN14 999 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 POTEGQ6S5H5 508 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 OTUD6AQ7L8S5 288 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 ZNF410Q86VK4 478 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 C4orf32Q8N8J7 132 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 ATXN2LQ8WWM7 1075 aaKnown RBP17.69■□□□□ 0.42
GABPA-203ENST00000487266 PSPC1Q8WXF1 523 aaKnown RBP17.69■□□□□ 0.42
GABPA-203ENST00000487266 ASB2Q96Q27 587 aa17.69■□□□□ 0.42
GABPA-203ENST00000487266 MTRQ99707 1265 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms