RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 IGSF5Q9NSI5 407 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 ARGLU1Q9NWB6 273 aaPredicted RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 ADD3Q9UEY8 706 aaKnown RBP5.53□□□□□ -1.52
SF3B6-202ENST00000478050 MAD2L2Q9UI95 211 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 CTNND2Q9UQB3 1225 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 KCNMB2Q9Y691 235 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 SNED1Q8TER0 1413 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 ANKRD31Q8N7Z5 1873 aa5.53□□□□□ -1.52
SF3B6-202ENST00000478050 FAM205AQ6ZU69 1335 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 LRRC10BA6NIK2 292 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 EFCAB8A8MWE9 144 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 H7C1D1 291 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 hCG_1984214I3L0E3 225 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 STXBP3O00186 592 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 TEX33O43247 280 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 MFAP3LO75121 409 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 TADA3O75528 432 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 RPN1P04843 607 aaKnown RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 FOSL1P15407 271 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 LMNB1P20700 586 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 HOXA7P31268 230 aaPredicted RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 MAP2K2P36507 400 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 COPB1P53618 953 aaKnown RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 ADKP55263 362 aaKnown RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 GNG11P61952 73 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 FAM193AP78312 1265 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 DMTNQ08495 405 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 RBL2Q08999 1139 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 STIM1Q13586 685 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 BMS1Q14692 1282 aaKnown RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 KRT31Q15323 416 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 IL17AQ16552 155 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 HSP90AA4PQ58FG1 418 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 WWC2Q6AWC2 1192 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 FBXO38Q6PIJ6 1188 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 TOGARAM2Q6ZUX3 1019 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 C16orf86Q6ZW13 317 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 VSIG10LQ86VR7 867 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 TMTC1Q8IUR5 882 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 KRT222Q8N1A0 295 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 ZNF713Q8N859 430 aaPredicted RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 CNBD1Q8NA66 436 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 NOC3LQ8WTT2 800 aaKnown RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 TBC1D22AQ8WUA7 517 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 NELFBQ8WX92 580 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 UBXN4Q92575 508 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 RPGRQ92834 1020 aaKnown RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 KLHDC7BQ96G42 594 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 RBM17Q96I25 401 aaKnown RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 AK8Q96MA6 479 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 ASB16Q96NS5 453 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 TMEM47Q9BQJ4 181 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 RTFDC1Q9BY42 306 aaPredicted RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 DISC1Q9NRI5 854 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 IL17RBQ9NRM6 502 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 BARHL2Q9NY43 387 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 FAM53CQ9NYF3 392 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 PCDHA6Q9UN73 950 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 TTF2Q9UNY4 1162 aaKnown RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 PCDHA8Q9Y5H6 950 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 V9GYY5 206 aaPredicted RBP5.52□□□□□ -1.53
SF3B6-202ENST00000478050 ATAD5Q96QE3 1844 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 PLIN4Q96Q06 1357 aa5.52□□□□□ -1.53
SF3B6-202ENST00000478050 NRXN2Q9P2S2 1712 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 KIF13BQ9NQT8 1826 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 GPR75-ASB3A0A0A6YYF3 556 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 A0A1W2PQC6 194 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 ESYT2A0FGR8 921 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 IQCA1LA6NCM1 817 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 KCNJ18B7U540 433 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 N4BP3O15049 544 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 ATP8B1O43520 1251 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 KIF5CO60282 957 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 PARP1P09874 1014 aaKnown RBP5.51□□□□□ -1.53
SF3B6-202ENST00000478050 OR52Z1P0C646 297 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 IL1R1P14778 569 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 TCF3P15923 654 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 ZSCAN20P17040 1043 aaPredicted RBP5.51□□□□□ -1.53
SF3B6-202ENST00000478050 PTPRAP18433 802 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 EEF1GP26641 437 aaKnown RBP5.51□□□□□ -1.53
SF3B6-202ENST00000478050 MAP4P27816 1152 aaKnown RBP5.51□□□□□ -1.53
SF3B6-202ENST00000478050 CASP1P29466 404 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 GNA11P29992 359 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 PLA2G5P39877 138 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 UBA7P41226 1012 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 BTDP43251 543 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 CDK8P49336 464 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 NAPAP54920 295 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 TUBB4BP68371 445 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 ST5P78524 1137 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 PPP2R3AQ06190 1150 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 KCNJ12Q14500 433 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 NFIXQ14938 502 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 PTPN21Q16825 1174 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 ERCC6LQ2NKX8 1250 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 ARHGAP29Q52LW3 1261 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 TCP11X2Q5H9J9 407 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 SOGA3Q5TF21 947 aa5.51□□□□□ -1.53
SF3B6-202ENST00000478050 TTC39BQ5VTQ0 682 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms