RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 IRF9Q00978 393 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 INF2Q27J81 1249 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ATP13A4Q4VNC1 1196 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 EMC4Q5J8M3 183 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GJC2Q5T442 439 aaPredicted RBP3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GPR158Q5T848 1215 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CCDC181Q5TID7 509 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CD300LDQ6UXZ3 194 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CCDC103Q8IW40 242 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TEX2Q8IWB9 1127 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FAM26EQ8N5C1 309 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PCDH19Q8TAB3 1148 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 UHMK1Q8TAS1 419 aaKnown RBP3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MBD6Q96DN6 1003 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KCNJ15Q99712 375 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TMEM168Q9H0V1 697 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 DDX56Q9NY93 547 aaKnown RBP3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MYOTQ9UBF9 498 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TMEFF2Q9UIK5 374 aaPredicted RBP3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 COQ6Q9Y2Z9 468 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 RWDD3Q9Y3V2 267 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PCDHB4Q9Y5E5 795 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CUX1P39880 1505 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ABCA5Q8WWZ7 1642 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ST20-MTHFSA0A0A6YYL1 179 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PTPDC1A2A3K4 754 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GPR39O43194 453 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GLRX3O76003 335 aaKnown RBP3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FKBP9O95302 570 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CFBP00751 764 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ADH4P08319 380 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PDGFRBP09619 1106 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ITGB6P18564 788 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KRT15P19012 456 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GUCY2FP51841 1108 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 EPHB1P54762 984 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ITGA1P56199 1179 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TMPRSS15P98073 1019 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 AMPD3Q01432 767 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZNF460Q14592 562 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ODR4Q5SWX8 454 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CC2D1AQ6P1N0 951 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KCTD1Q719H9 257 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FKBP9P1Q75LS8 142 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 OTOP1Q7RTM1 612 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 AMOTL1Q8IY63 956 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CISD2Q8N5K1 135 aaKnown RBP3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TTLL11Q8NHH1 800 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CALML6Q8TD86 181 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SSH1Q8WYL5 1049 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SCLYQ96I15 445 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GPATCH3Q96I76 525 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 WNT8AQ9H1J5 351 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 L2HGDHQ9H9P8 463 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KCNH7Q9NS40 1196 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TOMM22Q9NS69 142 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SLC5A4Q9NY91 659 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SRPK3Q9UPE1 567 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MRFAP1Q9Y605 127 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ADAMTS12P58397 1594 aa3.45□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ASXL2Q76L83 1435 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 HECW2Q9P2P5 1572 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PLSCR1O15162 318 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MSCO60682 206 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KRT37O76014 449 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 LCP1P13796 627 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PDE6AP16499 860 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 BPIP17213 487 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 BMP5P22003 454 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FPR2P25090 351 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 HERVK_113P62684 666 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CYP4F3Q08477 520 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 STAT4Q14765 748 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 DDB1Q16531 1140 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 DENND5AQ6IQ26 1287 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TIGD7Q6NT04 549 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ETV3LQ6ZN32 361 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ARHGAP36Q6ZRI8 547 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 OVCH1Q7RTY7 1134 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 HDGFL2Q7Z4V5 671 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 DDX42Q86XP3 938 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 LARP4BQ92615 738 aaKnown RBP3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PAWRQ96IZ0 340 aaKnown RBP3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MAML3Q96JK9 1138 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ACAP3Q96P50 834 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GPR101Q96P66 508 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GNRHR2Q96P88 292 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MEGF9Q9H1U4 602 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FBLN5Q9UBX5 448 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SPO11Q9Y5K1 396 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 POGZQ7Z3K3 1410 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 UACAQ9BZF9 1416 aa3.44□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PRAMEF25A6NGN4 478 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZNF561-AS1K7EIQ3 104 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FOXS1O43638 330 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 NTRK1P04629 796 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CKMP06732 381 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms