RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 SPATA31C1P0DKV0 1188 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 MUTP22033 750 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 PAK2Q13177 524 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 KIAA0753Q2KHM9 967 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 DPY19L2P1Q6NXN4 242 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 MREGQ8N565 214 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 LENG9Q96B70 501 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 PBKQ96KB5 322 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 AGBL1Q96MI9 1066 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 GOLGA6AQ9NYA3 693 aa27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 CTDP1Q9Y5B0 961 aaPredicted RBP27.2■■□□□ 1.94
RUNDC3A-201ENST00000225441 MYPNQ86TC9 1320 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 POTEFA5A3E0 1075 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 BUB1O43683 1085 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 EYA4O95677 639 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 TREML2Q5T2D2 321 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 POTEGQ6S5H5 508 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 POTEEQ6S8J3 1075 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 LRRC31Q6UY01 552 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 GADL1Q6ZQY3 521 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 FMNL3Q8IVF7 1028 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 ANKRD13CQ8N6S4 541 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 C2orf69Q8N8R5 385 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 GJA10Q969M2 543 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 OLFML3Q9NRN5 406 aa27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 RBM12Q9NTZ6 932 aaKnown RBP27.19■■□□□ 1.94
RUNDC3A-201ENST00000225441 A0A087X0T9 212 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 NPHP3-ACAD11A0A0J9YXS1 232 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 NCK2O43639 380 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 HSF2BPO75031 334 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 ITGBL1O95965 494 aaPredicted RBP27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 FAM228BP0C875 321 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 XRCC5P13010 732 aaKnown RBP27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 KLRC1P26715 233 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 PRR16Q569H4 304 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 IRF2BP2Q7Z5L9 587 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 C1orf131Q8NDD1 294 aaKnown RBP27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 HDAC7Q8WUI4 952 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 RAVER2Q9HCJ3 691 aaKnown RBP27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 PNMA2Q9UL42 364 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 ADAMTS5Q9UNA0 930 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 EIF3DO15371 548 aaKnown RBP eCLIP27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 TNNC1P63316 161 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 EXOC3L4Q17RC7 722 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 SRLQ86TD4 932 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 VPS36Q86VN1 386 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 CPXCR1Q8N123 301 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 LMBR1Q8WVP7 490 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 TAF4BQ92750 862 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 WNK4Q96J92 1243 aa27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 INPP4AQ96PE3 977 aaPredicted RBP27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.18■■□□□ 1.94
RUNDC3A-201ENST00000225441 A0A0A6YYK5 440 aaPredicted RBP27.17■■□□□ 1.94
RUNDC3A-201ENST00000225441 CXCR5P32302 372 aa27.17■■□□□ 1.94
RUNDC3A-201ENST00000225441 GJA5P36382 358 aa27.17■■□□□ 1.94
RUNDC3A-201ENST00000225441 STAT3P40763 770 aa27.17■■□□□ 1.94
RUNDC3A-201ENST00000225441 FAM133AQ8N9E0 248 aa27.17■■□□□ 1.94
RUNDC3A-201ENST00000225441 SPAG5Q96R06 1193 aa27.17■■□□□ 1.94
RUNDC3A-201ENST00000225441 REEP2Q9BRK0 252 aa27.17■■□□□ 1.94
RUNDC3A-201ENST00000225441 TUFT1Q9NNX1 390 aa27.17■■□□□ 1.94
RUNDC3A-201ENST00000225441 UBE4BO95155 1302 aa27.17■■□□□ 1.94
RUNDC3A-201ENST00000225441 UCHL3P15374 230 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 SFR1Q86XK3 245 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 GSPT2Q8IYD1 628 aaKnown RBP27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 REPS2Q8NFH8 660 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 WHAMMQ8TF30 809 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 RUFY1Q96T51 708 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 HOXC10Q9NYD6 342 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 ADAMTS1Q9UHI8 967 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 VAV3Q9UKW4 847 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 TBCAO75347 108 aaKnown RBP27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 IRX5P78411 483 aaPredicted RBP27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 ZHX3Q9H4I2 956 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 TMEM59LQ9UK28 342 aa27.16■■□□□ 1.94
RUNDC3A-201ENST00000225441 SPDYE16A6NNV3 312 aaPredicted RBP27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 PON1P27169 355 aa27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 MATR3P43243 847 aaKnown RBP eCLIP27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 NPEPPSP55786 919 aa27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 EPHA7Q15375 998 aa27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 CD302Q8IX05 232 aa27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 CALR3Q96L12 384 aaKnown RBP27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 MKNK1Q9BUB5 465 aa27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 FAM107BQ9H098 131 aa27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 NENFQ9UMX5 172 aa27.15■■□□□ 1.94
RUNDC3A-201ENST00000225441 SMCHD1A6NHR9 2005 aa27.14■■□□□ 1.94
RUNDC3A-201ENST00000225441 NR3C1P04150 777 aa27.14■■□□□ 1.94
RUNDC3A-201ENST00000225441 OAZ1P54368 228 aa27.14■■□□□ 1.94
RUNDC3A-201ENST00000225441 PABPC4Q13310 644 aaKnown RBP eCLIP27.14■■□□□ 1.94
RUNDC3A-201ENST00000225441 MOGSQ13724 837 aa27.14■■□□□ 1.94
RUNDC3A-201ENST00000225441 RPS6KA1Q15418 735 aa27.14■■□□□ 1.94
RUNDC3A-201ENST00000225441 P2RX7Q99572 595 aaKnown RBP27.14■■□□□ 1.94
RUNDC3A-201ENST00000225441 SEL1LQ9UBV2 794 aa27.14■■□□□ 1.94
RUNDC3A-201ENST00000225441 RRP15Q9Y3B9 282 aaKnown RBP27.14■■□□□ 1.94
RUNDC3A-201ENST00000225441 GCOM1H8Y6P7 765 aaPredicted RBP27.13■■□□□ 1.93
RUNDC3A-201ENST00000225441 MSH4O15457 936 aa27.13■■□□□ 1.93
RUNDC3A-201ENST00000225441 CFBP00751 764 aa27.13■■□□□ 1.93
RUNDC3A-201ENST00000225441 POLR2MP0CAP2 368 aa27.13■■□□□ 1.93
RUNDC3A-201ENST00000225441 ALAS1P13196 640 aa27.13■■□□□ 1.93
RUNDC3A-201ENST00000225441 ERCC3P19447 782 aa27.13■■□□□ 1.93
RUNDC3A-201ENST00000225441 HOXA13P31271 388 aaPredicted RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms