RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Gm8994E9PV04 411 aaKnown RBP10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Top3aO70157 1003 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Syce2Q505B8 171 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Trim38Q5SZ99 471 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 LrmpQ60664 539 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Stx3Q64704 289 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 SnphQ80U23 495 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Psmd5Q8BJY1 504 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Afap1l1Q8BZI0 768 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 ThtpaQ8JZL3 224 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Tasp1Q8R1G1 420 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Ttll1Q91V51 423 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Pfdn1Q9CWM4 122 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 LrgukQ9D5S7 820 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Tspan17Q9D7W4 270 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Krt17Q9QWL7 433 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Uggt1Q6P5E4 1551 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Ano3A2AHL1 981 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Etnk2A7MCT6 385 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 CrklP47941 303 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Usp13Q5BKP2 858 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Itih1Q61702 907 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Krt31Q61765 416 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Tspyl5Q69ZB3 406 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 NostrinQ6WKZ7 506 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Gps1Q99LD4 471 aaKnown RBP10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Mageb16Q9CWV4 363 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Prpf4Q9DAW6 521 aaKnown RBP10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Hao1Q9WU19 370 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Gm7168A0AUV4 508 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Wdhd1P59328 1117 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Tbx2Q60707 711 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 C2cd2lQ80X80 706 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Ptdss1Q99LH2 473 aaKnown RBP10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Lpin2Q99PI5 893 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Ehd4Q9EQP2 541 aa10.93□□□□□ -0.66
Lig4-201ENSMUST00000095476 Setd1bQ8CFT2 1985 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 1700016G14RikA0A286YCZ6 238 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Herc3A6H6S0 1050 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Vmn2r71L7N2D8 855 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Cdh15P33146 784 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Scg2Q03517 617 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Gngt2Q61017 69 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Rbm26Q6NZN0 1012 aaKnown RBP10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Dars2Q8BIP0 653 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 NcaphQ8C156 731 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Nmd3Q99L48 503 aaKnown RBP10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Cdc27A2A6Q5 825 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Pdzd8B9EJ80 1147 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 1700029H14RikE9PY36 240 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Akr1b10G5E895 316 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Trappc3O55013 180 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 DtnbO70585 659 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Ccng1P51945 294 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Sema3eP70275 775 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Zscan2Q07230 614 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Mphosph8Q3TYA6 858 aaKnown RBP10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Mcf2lQ64096 1149 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Esco1Q69Z69 843 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 CapslQ6P8Y1 208 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Phactr3Q8BYK5 558 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Ttc39bQ8BYY4 617 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Sept11Q8C1B7 431 aaKnown RBP10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Zfp446Q8C9M8 523 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Lmbrd1Q8K0B2 537 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Nudcd3Q8R1N4 363 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Pcdhb5Q91XZ5 792 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Hyou1Q9JKR6 999 aaKnown RBP10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Hs6st3Q9QYK4 470 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Ulk4Q3V129 1303 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Ugt1a8D3Z748 530 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Ugt1a10E9PXN7 530 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Aff1O88573 1216 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Pgk2P09041 417 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Olfm4Q3UZZ4 505 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Satb1Q60611 764 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Khdrbs1Q60749 443 aaKnown RBP10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 AarsQ8BGQ7 968 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Bst2Q8R2Q8 172 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Gid8Q9D7M1 228 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Sgpp1Q9JI99 430 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Rap1gds1E9Q912 607 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Raph1F2Z3U3 1266 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Il27raO70394 623 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 RalgdsQ03385 852 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Q3TQQ9 903 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Rsad1Q5SUV1 442 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 A1cfQ5YD48 595 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Celf4Q7TSY6 486 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 TbcbQ9D1E6 244 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Snx5Q9D8U8 404 aa10.92□□□□□ -0.66
Lig4-201ENSMUST00000095476 Cep152A2AUM9 1736 aaKnown RBP10.91□□□□□ -0.66
Lig4-201ENSMUST00000095476 Pitpnm2Q6ZPQ6 1335 aa10.91□□□□□ -0.66
Lig4-201ENSMUST00000095476 Hsd17b1P51656 344 aa10.91□□□□□ -0.66
Lig4-201ENSMUST00000095476 Hspa8P63017 646 aaKnown RBP10.91□□□□□ -0.66
Lig4-201ENSMUST00000095476 Upf3bQ3ULL6 472 aa10.91□□□□□ -0.66
Lig4-201ENSMUST00000095476 Foxn3Q499D0 457 aa10.91□□□□□ -0.66
Lig4-201ENSMUST00000095476 Acap2Q6ZQK5 770 aa10.91□□□□□ -0.66
Lig4-201ENSMUST00000095476 Eps8l2Q99K30 729 aa10.91□□□□□ -0.66
Lig4-201ENSMUST00000095476 Cxcl11Q9JHH5 100 aa10.91□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms