RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cnpy2Q9QXT0 182 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mtmr9Q9Z2D0 545 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Syngap1F6SEU4 1340 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gml2G5E8L7 176 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 BhmtO35490 407 aaKnown RBP7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nmt1O70310 496 aaKnown RBP7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Fzd1O70421 642 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gja8P28236 440 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Arpp19P56212 112 aaKnown RBP7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Edem3Q2HXL6 931 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Hspa4Q61316 841 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mpp4Q6P7F1 635 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pcdhb14Q6PB90 796 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Necab1Q8BG18 352 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tmem220Q8BP07 167 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Naa25Q8BWZ3 972 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ankrd54Q91WK7 299 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dnajc14Q921R4 703 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Prmt7Q922X9 692 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ppp2r2dQ925E7 453 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cd2bp2Q9CWK3 342 aaKnown RBP7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Armc9Q9D2I5 817 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Fmnl1Q9JL26 1094 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Plxnb2B2RXS4 1842 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gm7168A0AUV4 508 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 March10E9PX79 788 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Bcat1P24288 386 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ube2hP62257 183 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cct6aP80317 531 aaKnown RBP7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tfdp1Q08639 410 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mysm1Q69Z66 819 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Sh3tc2Q80VA5 1289 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Caps2Q8BUG5 550 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ccdc169Q8BXX9 214 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ccdc186Q8C9S4 917 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Phtf2Q8CB19 747 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nek9Q8K1R7 984 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Lrrc46Q9DAP0 323 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 DgkeQ9R1C6 564 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 MtrA6H5Y3 1253 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ccng2O08918 344 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gnrh1P13562 90 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dcaf17Q3TUL7 519 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tax1bp1Q3UKC1 814 aaKnown RBP7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 ChpfQ6IQX7 774 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mrgprb8Q7TN51 330 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Bmp3Q8BHE5 468 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gpc2Q8BKV1 579 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 AsphQ8BSY0 741 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Brms1Q99N20 246 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Slc5a4aQ9ET37 656 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Myh8P13542 1937 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Zfp358E9Q8M1 571 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 SprtnG3X912 497 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cyp11b2P15539 500 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Fmr1P35922 614 aaKnown RBP7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 ZbbxQ0P5X5 716 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 LbpQ61805 481 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dusp11Q6NXK5 321 aaKnown RBP7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Slc7a6osQ7TPE5 306 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Usp6nlQ80XC3 819 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Exoc1Q8R3S6 894 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Oit3Q8R4V5 546 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Olfr395Q8VGR3 312 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tubgcp2Q921G8 905 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pla2g4eQ50L42 875 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 ShbQ6PD21 503 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Snx13Q6PHS6 957 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Zfp397Q7TNK4 527 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Fndc3aQ8BX90 1198 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Vmn1r213Q8R278 384 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dnajc19Q9CQV7 116 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 CenpsQ9D084 142 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tll2Q9WVM6 1012 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Arid3bQ9Z1N7 568 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Scn10aQ6QIY3 1958 aa7.53□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Sptlc1O35704 473 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 SsbP32067 415 aaKnown RBP7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gng11P61953 73 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Atp9bP98195 1146 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Wdr93Q402B2 695 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Recql4Q75NR7 1216 aaKnown RBP7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pi4kbQ8BKC8 816 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Azin2Q8BVM4 459 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Usp37Q8C0R0 979 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dennd2aQ8C4S8 1000 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ttc9bQ9D6E4 239 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tacc2Q9JJG0 1149 aa7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Knop1Q9Z2Q2 478 aaKnown RBP7.52□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gm45140A0A0N4SUM8 220 aa7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ttll6A4Q9E8 822 aa7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 DgkhD3YXJ0 1156 aa7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Rgs2O08849 211 aa7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 StrnO55106 780 aa7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mindy4Q3UQI9 744 aa7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fam189a2Q4FZH1 290 aa7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pnpla2Q8BJ56 486 aa7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Luzp1Q8R4U7 1068 aaKnown RBP7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 IydQ9DCX8 285 aa7.52□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tlr6Q9EPW9 795 aa7.52□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms