RNA–Protein interactions for RNA: snR80

snR80, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR80, Length 171 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR80	snR80	YDR222W	Q04925	415 aa		0.3	□□□□□ -2.36
snR80	snR80	DXO1	Q06349	442 aa		0.3	□□□□□ -2.36
snR80	snR80	MRX4	Q12467	430 aa		0.3	□□□□□ -2.36
snR80	snR80	YER079W	P40052	210 aa	Known RBP	0.29	□□□□□ -2.36
snR80	snR80	GAS2	Q06135	555 aa		0.29	□□□□□ -2.36
snR80	snR80	YPL264C	Q08980	353 aa		0.29	□□□□□ -2.36
snR80	snR80	DST1	P07273	309 aa		0.28	□□□□□ -2.36
snR80	snR80	AAC3	P18238	307 aa		0.28	□□□□□ -2.36
snR80	snR80	MCM10	P32354	571 aa		0.28	□□□□□ -2.36
snR80	snR80	CTM1	P38818	585 aa		0.28	□□□□□ -2.36
snR80	snR80	AIM23	P47015	356 aa		0.28	□□□□□ -2.36
snR80	snR80	SKO1	Q02100	647 aa		0.28	□□□□□ -2.36
snR80	snR80	YDL109C	Q12103	647 aa		0.28	□□□□□ -2.36
snR80	snR80	BGL2	P15703	313 aa	Known RBP	0.27	□□□□□ -2.37
snR80	snR80	FAR1	P21268	830 aa		0.27	□□□□□ -2.37
snR80	snR80	MIR1	P23641	311 aa	Known RBP	0.27	□□□□□ -2.37
snR80	snR80	ROX1	P25042	368 aa		0.27	□□□□□ -2.37
snR80	snR80	RCK1	P38622	512 aa		0.27	□□□□□ -2.37
snR80	snR80	YER084W	P40057	128 aa		0.27	□□□□□ -2.37
snR80	snR80	MIC19	P43594	170 aa		0.27	□□□□□ -2.37
snR80	snR80	ECO1	P43605	281 aa		0.27	□□□□□ -2.37
snR80	snR80	STE24	P47154	453 aa		0.27	□□□□□ -2.37
snR80	snR80	KAP120	Q02932	1032 aa		0.27	□□□□□ -2.37
snR80	snR80	TY3A-G	Q12173	290 aa		0.27	□□□□□ -2.37
snR80	snR80	TY3A-I	Q99219	290 aa		0.27	□□□□□ -2.37
snR80	snR80	PWP2	P25635	923 aa	Known RBP	0.26	□□□□□ -2.37
snR80	snR80	ARO4	P32449	370 aa	Known RBP	0.26	□□□□□ -2.37
snR80	snR80	VPS24	P36095	224 aa	Known RBP	0.26	□□□□□ -2.37
snR80	snR80	UTP9	P38882	575 aa	Known RBP	0.26	□□□□□ -2.37
snR80	snR80	SMF1	P38925	575 aa		0.26	□□□□□ -2.37
snR80	snR80	YIL054W	P40524	105 aa		0.26	□□□□□ -2.37
snR80	snR80	SYF2	P53277	215 aa	Predicted RBP	0.26	□□□□□ -2.37
snR80	snR80	RRN9	P53437	365 aa		0.26	□□□□□ -2.37
snR80	snR80	RPA49	Q01080	415 aa	Predicted RBP	0.26	□□□□□ -2.37
snR80	snR80	RPL23A	P0CX41	137 aa	Known RBP	0.25	□□□□□ -2.37
snR80	snR80	RPL23B	P0CX42	137 aa	Known RBP	0.25	□□□□□ -2.37
snR80	snR80	SSH4	P32343	579 aa		0.25	□□□□□ -2.37
snR80	snR80	ATM1	P40416	690 aa		0.25	□□□□□ -2.37
snR80	snR80	PRP42	Q03776	544 aa	Known RBP	0.25	□□□□□ -2.37
snR80	snR80	ECM19	Q06011	112 aa		0.25	□□□□□ -2.37
snR80	snR80	MMT2	Q08970	484 aa		0.25	□□□□□ -2.37
snR80	snR80	MED2	Q12124	431 aa		0.25	□□□□□ -2.37
snR80	snR80	YDR018C	Q12185	396 aa		0.25	□□□□□ -2.37
snR80	snR80	GRX6	Q12438	231 aa		0.25	□□□□□ -2.37
snR80	snR80	PIB2	P53191	635 aa		0.24	□□□□□ -2.37
snR80	snR80	PRP3	Q03338	469 aa	Predicted RBP	0.24	□□□□□ -2.37
snR80	snR80	DFM1	Q12743	341 aa	Known RBP	0.24	□□□□□ -2.37
snR80	snR80	TPK3	P05986	398 aa		0.23	□□□□□ -2.37
snR80	snR80	RPB9	P27999	122 aa		0.23	□□□□□ -2.37
snR80	snR80	ITR2	P30606	609 aa		0.23	□□□□□ -2.37
snR80	snR80	ARF3	P40994	183 aa	RIP-Chip data	0.23	□□□□□ -2.37	not detected
snR80	snR80	SEC27	P41811	889 aa	Known RBP	0.23	□□□□□ -2.37
snR80	snR80	CAK1	P43568	368 aa	Predicted RBP	0.23	□□□□□ -2.37
snR80	snR80	DAN1	P47178	298 aa		0.23	□□□□□ -2.37
snR80	snR80	PMT5	P52867	743 aa		0.23	□□□□□ -2.37
snR80	snR80	MIG2	P53035	382 aa		0.23	□□□□□ -2.37
snR80	snR80	IES3	Q12345	250 aa		0.23	□□□□□ -2.37
snR80	snR80	COX3	P00420	269 aa		0.22	□□□□□ -2.37
snR80	snR80	YAK1	P14680	807 aa		0.22	□□□□□ -2.37
snR80	snR80	IST2	P38250	946 aa		0.22	□□□□□ -2.37
snR80	snR80	TAE1	P38340	232 aa		0.22	□□□□□ -2.37
snR80	snR80	EFM3	P47163	339 aa		0.22	□□□□□ -2.37
snR80	snR80	RTS3	P53289	263 aa		0.22	□□□□□ -2.37
snR80	snR80	AQR1	P53943	586 aa		0.22	□□□□□ -2.37
snR80	snR80	DCS1	Q06151	350 aa		0.22	□□□□□ -2.37
snR80	snR80	CDC21	P06785	304 aa		0.21	□□□□□ -2.38
snR80	snR80	ARF1	P11076	181 aa	Known RBP	0.21	□□□□□ -2.38
snR80	snR80	DOA1	P36037	715 aa		0.21	□□□□□ -2.38
snR80	snR80	OLA1	P38219	394 aa	Known RBP	0.21	□□□□□ -2.38
snR80	snR80	DSK2	P48510	373 aa		0.21	□□□□□ -2.38
snR80	snR80	CAX4	P53223	239 aa		0.21	□□□□□ -2.38
snR80	snR80	YMR130W	Q04223	302 aa		0.21	□□□□□ -2.38
snR80	snR80	MMR1	Q06324	491 aa		0.21	□□□□□ -2.38
snR80	snR80	ARG3	P05150	338 aa		0.2	□□□□□ -2.38
snR80	snR80	SCO1	P23833	295 aa		0.2	□□□□□ -2.38
snR80	snR80	PMT2	P31382	759 aa		0.2	□□□□□ -2.38
snR80	snR80	HSP104	P31539	908 aa	Known RBP	0.2	□□□□□ -2.38
snR80	snR80	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.2	□□□□□ -2.38	not detected
snR80	snR80	YER188W	P40103	239 aa		0.2	□□□□□ -2.38
snR80	snR80	RRG9	P40156	214 aa		0.2	□□□□□ -2.38
snR80	snR80	NUP57	P48837	541 aa		0.2	□□□□□ -2.38
snR80	snR80	BNI5	P53890	448 aa	Known RBP	0.2	□□□□□ -2.38
snR80	snR80	INM2	Q05533	292 aa		0.2	□□□□□ -2.38
snR80	snR80	VPS68	Q12016	184 aa		0.2	□□□□□ -2.38
snR80	snR80	CAB3	P36076	571 aa		0.19	□□□□□ -2.38
snR80	snR80	INM1	P38710	295 aa		0.19	□□□□□ -2.38
snR80	snR80	TPM2	P40414	161 aa		0.19	□□□□□ -2.38
snR80	snR80	ABM1	P47146	123 aa		0.19	□□□□□ -2.38
snR80	snR80	OCA2	P53949	197 aa		0.19	□□□□□ -2.38
snR80	snR80	DON1	Q05610	365 aa		0.19	□□□□□ -2.38
snR80	snR80	DCR2	Q05924	578 aa		0.19	□□□□□ -2.38
snR80	snR80	AEP3	Q12089	606 aa		0.19	□□□□□ -2.38
snR80	snR80	YHR086W-A	Q3E746	53 aa		0.19	□□□□□ -2.38
snR80	snR80	VPS63	O13549	108 aa		0.18	□□□□□ -2.38
snR80	snR80	DPB3	P27344	201 aa		0.18	□□□□□ -2.38
snR80	snR80	TOA2	P32774	122 aa		0.18	□□□□□ -2.38
snR80	snR80	ZRT3	P34240	503 aa		0.18	□□□□□ -2.38
snR80	snR80	VID27	P40157	782 aa		0.18	□□□□□ -2.38
snR80	snR80	MTR10	Q99189	972 aa		0.18	□□□□□ -2.38
snR80	snR80	SLM5	P25345	492 aa	Known RBP	0.17	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms