RNA–Protein interactions for RNA: snR8

snR8, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR8, Length 190 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR8	snR8	SSE1	P32589	693 aa	Known RBP	0.24	□□□□□ -2.37
snR8	snR8	UTP15	Q04305	513 aa	Known RBP	0.24	□□□□□ -2.37
snR8	snR8	YDR056C	Q12025	205 aa		0.24	□□□□□ -2.37
snR8	snR8	SGT2	Q12118	346 aa	Known RBP	0.24	□□□□□ -2.37
snR8	snR8	PWP2	P25635	923 aa	Known RBP	0.23	□□□□□ -2.37
snR8	snR8	SSH4	P32343	579 aa		0.23	□□□□□ -2.37
snR8	snR8	FUI1	P38196	639 aa		0.23	□□□□□ -2.37
snR8	snR8	YER188W	P40103	239 aa		0.23	□□□□□ -2.37
snR8	snR8	VID27	P40157	782 aa		0.23	□□□□□ -2.37
snR8	snR8	TPM2	P40414	161 aa		0.23	□□□□□ -2.37
snR8	snR8	STE24	P47154	453 aa		0.23	□□□□□ -2.37
snR8	snR8	PIB2	P53191	635 aa		0.23	□□□□□ -2.37
snR8	snR8	OCA2	P53949	197 aa		0.23	□□□□□ -2.37
snR8	snR8	KAP120	Q02932	1032 aa		0.23	□□□□□ -2.37
snR8	snR8	ECM19	Q06011	112 aa		0.23	□□□□□ -2.37
snR8	snR8	YPL264C	Q08980	353 aa		0.23	□□□□□ -2.37
snR8	snR8	YDL109C	Q12103	647 aa		0.23	□□□□□ -2.37
snR8	snR8	YDR018C	Q12185	396 aa		0.23	□□□□□ -2.37
snR8	snR8	MED8	P38304	223 aa		0.22	□□□□□ -2.37
snR8	snR8	AIM23	P47015	356 aa		0.22	□□□□□ -2.37
snR8	snR8	CWC22	P53333	577 aa	Known RBP	0.22	□□□□□ -2.37
snR8	snR8	SKO1	Q02100	647 aa		0.22	□□□□□ -2.37
snR8	snR8	RPN9	Q04062	393 aa	Known RBP	0.22	□□□□□ -2.37
snR8	snR8	MMT2	Q08970	484 aa		0.22	□□□□□ -2.37
snR8	snR8	BGL2	P15703	313 aa	Known RBP	0.21	□□□□□ -2.38
snR8	snR8	CLC1	P17891	233 aa		0.21	□□□□□ -2.38
snR8	snR8	MIR1	P23641	311 aa	Known RBP	0.21	□□□□□ -2.38
snR8	snR8	RPL16A	P26784	199 aa	Known RBP	0.21	□□□□□ -2.38
snR8	snR8	PMT2	P31382	759 aa		0.21	□□□□□ -2.38
snR8	snR8	ERG3	P32353	365 aa		0.21	□□□□□ -2.38
snR8	snR8	YFR045W	P43617	309 aa		0.21	□□□□□ -2.38
snR8	snR8	GAS2	Q06135	555 aa		0.21	□□□□□ -2.38
snR8	snR8	DIB1	Q06819	143 aa	Predicted RBP	0.21	□□□□□ -2.38
snR8	snR8	RPL23A	P0CX41	137 aa	Known RBP	0.2	□□□□□ -2.38
snR8	snR8	RPL23B	P0CX42	137 aa	Known RBP	0.2	□□□□□ -2.38
snR8	snR8	PHO80	P20052	293 aa		0.2	□□□□□ -2.38
snR8	snR8	INO2	P26798	304 aa		0.2	□□□□□ -2.38
snR8	snR8	CAK1	P43568	368 aa	Predicted RBP	0.2	□□□□□ -2.38
snR8	snR8	DAN1	P47178	298 aa		0.2	□□□□□ -2.38
snR8	snR8	ARO4	P32449	370 aa	Known RBP	0.19	□□□□□ -2.38
snR8	snR8	CLB6	P32943	380 aa		0.19	□□□□□ -2.38
snR8	snR8	RCK1	P38622	512 aa		0.19	□□□□□ -2.38
snR8	snR8	ECO1	P43605	281 aa		0.19	□□□□□ -2.38
snR8	snR8	MIG2	P53035	382 aa		0.19	□□□□□ -2.38
snR8	snR8	DCS1	Q06151	350 aa		0.19	□□□□□ -2.38
snR8	snR8	MRX4	Q12467	430 aa		0.19	□□□□□ -2.38
snR8	snR8	DFM1	Q12743	341 aa	Known RBP	0.19	□□□□□ -2.38
snR8	snR8	TPK3	P05986	398 aa		0.18	□□□□□ -2.38
snR8	snR8	FAR1	P21268	830 aa		0.18	□□□□□ -2.38
snR8	snR8	ATM1	P40416	690 aa		0.18	□□□□□ -2.38
snR8	snR8	SEC27	P41811	889 aa	Known RBP	0.18	□□□□□ -2.38
snR8	snR8	PRP42	Q03776	544 aa	Known RBP	0.18	□□□□□ -2.38
snR8	snR8	UBX2	Q04228	584 aa		0.18	□□□□□ -2.38
snR8	snR8	YHR086W-A	Q3E746	53 aa		0.18	□□□□□ -2.38
snR8	snR8	RPS14A	P06367	137 aa	Known RBP	0.17	□□□□□ -2.38
snR8	snR8	TOA2	P32774	122 aa		0.17	□□□□□ -2.38
snR8	snR8	YKR015C	P36111	568 aa		0.17	□□□□□ -2.38
snR8	snR8	TAE1	P38340	232 aa		0.17	□□□□□ -2.38
snR8	snR8	RPS14B	P39516	138 aa	Known RBP	0.17	□□□□□ -2.38
snR8	snR8	RUP1	Q12242	671 aa		0.17	□□□□□ -2.38
snR8	snR8	CDC21	P06785	304 aa		0.16	□□□□□ -2.38
snR8	snR8	RRG9	P40156	214 aa		0.16	□□□□□ -2.38
snR8	snR8	SYF2	P53277	215 aa	Predicted RBP	0.16	□□□□□ -2.38
snR8	snR8	TIM10	P87108	93 aa		0.16	□□□□□ -2.38
snR8	snR8	YMR244W	Q04018	355 aa		0.16	□□□□□ -2.38
snR8	snR8	YMR130W	Q04223	302 aa		0.16	□□□□□ -2.38
snR8	snR8	ZRT3	P34240	503 aa		0.15	□□□□□ -2.39
snR8	snR8	INM1	P38710	295 aa		0.15	□□□□□ -2.39
snR8	snR8	EFM1	P38732	585 aa		0.15	□□□□□ -2.39
snR8	snR8	EFM3	P47163	339 aa		0.15	□□□□□ -2.39
snR8	snR8	PMT5	P52867	743 aa		0.15	□□□□□ -2.39
snR8	snR8	SCS7	Q03529	384 aa		0.15	□□□□□ -2.39
snR8	snR8	IMH1	Q06704	911 aa	Known RBP	0.15	□□□□□ -2.39
snR8	snR8	STN1	P38960	494 aa		0.14	□□□□□ -2.39
snR8	snR8	ARF3	P40994	183 aa	RIP-Chip data	0.14	□□□□□ -2.39	not detected
snR8	snR8	CAX4	P53223	239 aa		0.14	□□□□□ -2.39
snR8	snR8	INP1	Q03694	420 aa		0.14	□□□□□ -2.39
snR8	snR8	MMR1	Q06324	491 aa		0.14	□□□□□ -2.39
snR8	snR8	YOL159C-A	Q3E769	90 aa		0.14	□□□□□ -2.39
snR8	snR8	OPI3	P05375	206 aa		0.13	□□□□□ -2.39
snR8	snR8	ARO3	P14843	370 aa	Known RBP	0.13	□□□□□ -2.39
snR8	snR8	SAS3	P34218	831 aa		0.13	□□□□□ -2.39
snR8	snR8	ASC1	P38011	319 aa	Known RBP	0.13	□□□□□ -2.39
snR8	snR8	CTM1	P38818	585 aa		0.13	□□□□□ -2.39
snR8	snR8	PRP3	Q03338	469 aa	Predicted RBP	0.13	□□□□□ -2.39
snR8	snR8	ARX1	Q03862	593 aa	Known RBP	0.13	□□□□□ -2.39
snR8	snR8	RNH203	Q12338	110 aa		0.13	□□□□□ -2.39
snR8	snR8	IES3	Q12345	250 aa		0.13	□□□□□ -2.39
snR8	snR8	MET17	P06106	444 aa		0.12	□□□□□ -2.39
snR8	snR8	TRX2	P22803	104 aa	Known RBP	0.12	□□□□□ -2.39
snR8	snR8	DOA1	P36037	715 aa		0.12	□□□□□ -2.39
snR8	snR8	IST2	P38250	946 aa		0.12	□□□□□ -2.39
snR8	snR8	UTP9	P38882	575 aa	Known RBP	0.12	□□□□□ -2.39
snR8	snR8	DSK2	P48510	373 aa		0.12	□□□□□ -2.39
snR8	snR8	ACL4	Q03771	387 aa		0.12	□□□□□ -2.39
snR8	snR8	DCR2	Q05924	578 aa		0.12	□□□□□ -2.39
snR8	snR8	VPS68	Q12016	184 aa		0.12	□□□□□ -2.39
snR8	snR8	RPL12A	P0CX53	165 aa	Known RBP	0.11	□□□□□ -2.39
snR8	snR8	RPL12B	P0CX54	165 aa		0.11	□□□□□ -2.39
snR8	snR8	ARF1	P11076	181 aa	Known RBP	0.11	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms