RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 ATP1P07251 545 aaKnown RBP-0.33□□□□□ -2.46
snR50snR50 SGA1P08019 549 aa-0.33□□□□□ -2.46
snR50snR50 YOL163WP0CF20 169 aa-0.33□□□□□ -2.46
snR50snR50 BGL2P15703 313 aaKnown RBP-0.33□□□□□ -2.46
snR50snR50 ALG1P16661 449 aa-0.33□□□□□ -2.46
snR50snR50 YGL010WP25338 174 aa-0.33□□□□□ -2.46
snR50snR50 ITR2P30606 609 aa-0.33□□□□□ -2.46
snR50snR50 SOR1P35497 357 aaKnown RBP-0.33□□□□□ -2.46
snR50snR50 MYO3P36006 1272 aa-0.33□□□□□ -2.46
snR50snR50 MCR1P36060 302 aaKnown RBP-0.33□□□□□ -2.46
snR50snR50 YKR045CP36138 183 aa-0.33□□□□□ -2.46
snR50snR50 YHR045WP38775 560 aa-0.33□□□□□ -2.46
snR50snR50 SHC1P39000 512 aa-0.33□□□□□ -2.46
snR50snR50 MET28P40573 187 aa-0.33□□□□□ -2.46
snR50snR50 EFM3P47163 339 aa-0.33□□□□□ -2.46
snR50snR50 YJR141WP47172 347 aaPredicted RBP-0.33□□□□□ -2.46
snR50snR50 YJR146WP47174 117 aa-0.33□□□□□ -2.46
snR50snR50 SSU72P53538 206 aaPredicted RBP-0.33□□□□□ -2.46
snR50snR50 TRM112P53738 135 aaPredicted RBP-0.33□□□□□ -2.46
snR50snR50 BNI5P53890 448 aaKnown RBP-0.33□□□□□ -2.46
snR50snR50 YNL040WP53960 456 aaPredicted RBP-0.33□□□□□ -2.46
snR50snR50 NGL3Q03210 505 aa-0.33□□□□□ -2.46
snR50snR50 YMR010WQ03687 405 aa-0.33□□□□□ -2.46
snR50snR50 SNT309Q06091 175 aaPredicted RBP-0.33□□□□□ -2.46
snR50snR50 SUE1Q06524 206 aa-0.33□□□□□ -2.46
snR50snR50 SOR2Q07786 357 aa-0.33□□□□□ -2.46
snR50snR50 TIM22Q12328 207 aa-0.33□□□□□ -2.46
snR50snR50 RTN2Q12443 393 aa-0.33□□□□□ -2.46
snR50snR50 TDH1P00360 332 aaKnown RBP-0.34□□□□□ -2.46
snR50snR50 MIR1P23641 311 aaKnown RBP-0.34□□□□□ -2.46
snR50snR50 RHB1P25378 209 aa-0.34□□□□□ -2.46
snR50snR50 RRT12P25381 491 aa-0.34□□□□□ -2.46
snR50snR50 ATG15P25641 520 aa-0.34□□□□□ -2.46
snR50snR50 CSE1P33307 960 aa-0.34□□□□□ -2.46
snR50snR50 TIR2P33890 251 aa-0.34□□□□□ -2.46
snR50snR50 YOR062CP36025 268 aa-0.34□□□□□ -2.46
snR50snR50 CMC1P36064 111 aa-0.34□□□□□ -2.46
snR50snR50 GPX2P38143 162 aa-0.34□□□□□ -2.46
snR50snR50 YBR220CP38318 560 aa-0.34□□□□□ -2.46
snR50snR50 PEP8P40335 379 aa-0.34□□□□□ -2.46
snR50snR50 UTP25P40498 721 aaKnown RBP-0.34□□□□□ -2.46
snR50snR50 MRPL49P40858 161 aaPredicted RBP-0.34□□□□□ -2.46
snR50snR50 RPS0BP46654 252 aaKnown RBP-0.34□□□□□ -2.46
snR50snR50 AIM23P47015 356 aa-0.34□□□□□ -2.46
snR50snR50 FMS1P50264 508 aa-0.34□□□□□ -2.46
snR50snR50 MND1P53102 219 aa-0.34□□□□□ -2.46
snR50snR50 LSG1P53145 640 aaKnown RBP-0.34□□□□□ -2.46
snR50snR50 CAX4P53223 239 aa-0.34□□□□□ -2.46
snR50snR50 RTS3P53289 263 aa-0.34□□□□□ -2.46
snR50snR50 SPR6Q01684 191 aa-0.34□□□□□ -2.46
snR50snR50 GAS2Q06135 555 aa-0.34□□□□□ -2.46
snR50snR50 RDS3Q06835 107 aaPredicted RBP-0.34□□□□□ -2.46
snR50snR50 MMT2Q08970 484 aa-0.34□□□□□ -2.46
snR50snR50 RCN2Q12044 265 aa-0.34□□□□□ -2.46
snR50snR50 YPL247CQ12523 523 aa-0.34□□□□□ -2.46
snR50snR50 DPM1P14020 267 aaKnown RBP-0.35□□□□□ -2.47
snR50snR50 FPR1P20081 114 aaKnown RBP-0.35□□□□□ -2.47
snR50snR50 ZRT3P34240 503 aa-0.35□□□□□ -2.47
snR50snR50 RRN3P36070 627 aa-0.35□□□□□ -2.47
snR50snR50 CST26P38226 397 aa-0.35□□□□□ -2.47
snR50snR50 TAE1P38340 232 aa-0.35□□□□□ -2.47
snR50snR50 GLE2P40066 365 aa-0.35□□□□□ -2.47
snR50snR50 SAP185P40856 1058 aa-0.35□□□□□ -2.47
snR50snR50 HXT14P42833 540 aa-0.35□□□□□ -2.47
snR50snR50 DUO1P53168 247 aaKnown RBP-0.35□□□□□ -2.47
snR50snR50 YGR021WP53212 290 aa-0.35□□□□□ -2.47
snR50snR50 RQC1Q05468 723 aaKnown RBP-0.35□□□□□ -2.47
snR50snR50 YOL019WQ08157 551 aa-0.35□□□□□ -2.47
snR50snR50 RPN8Q08723 338 aaKnown RBP-0.35□□□□□ -2.47
snR50snR50 YDL109CQ12103 647 aa-0.35□□□□□ -2.47
snR50snR50 HUA2Q12134 243 aa-0.35□□□□□ -2.47
snR50snR50 VPS63O13549 108 aa-0.36□□□□□ -2.47
snR50snR50 HIS3P06633 220 aa-0.36□□□□□ -2.47
snR50snR50 CPA1P07258 411 aaKnown RBP-0.36□□□□□ -2.47
snR50snR50 RPL23AP0CX41 137 aaKnown RBP-0.36□□□□□ -2.47
snR50snR50 RPL23BP0CX42 137 aaKnown RBP-0.36□□□□□ -2.47
snR50snR50 ZWF1P11412 505 aaKnown RBP-0.36□□□□□ -2.47
snR50snR50 RPL16AP26784 199 aaKnown RBP-0.36□□□□□ -2.47
snR50snR50 BEM1P29366 551 aa-0.36□□□□□ -2.47
snR50snR50 NOP4P37838 685 aaKnown RBP-0.36□□□□□ -2.47
snR50snR50 RRN10P38204 145 aa-0.36□□□□□ -2.47
snR50snR50 YEL057CP39983 233 aa-0.36□□□□□ -2.47
snR50snR50 RRN9P53437 365 aa-0.36□□□□□ -2.47
snR50snR50 DAD3P69850 94 aa-0.36□□□□□ -2.47
snR50snR50 GTR1Q00582 310 aa-0.36□□□□□ -2.47
snR50snR50 RPA49Q01080 415 aaPredicted RBP-0.36□□□□□ -2.47
snR50snR50 SCS7Q03529 384 aa-0.36□□□□□ -2.47
snR50snR50 YDR131CQ03899 556 aa-0.36□□□□□ -2.47
snR50snR50 YMR244WQ04018 355 aa-0.36□□□□□ -2.47
snR50snR50 COG4Q06096 861 aa-0.36□□□□□ -2.47
snR50snR50 MMR1Q06324 491 aa-0.36□□□□□ -2.47
snR50snR50 ATG29Q12092 213 aa-0.36□□□□□ -2.47
snR50snR50 RIO1Q12196 484 aaKnown RBP-0.36□□□□□ -2.47
snR50snR50 RUP1Q12242 671 aa-0.36□□□□□ -2.47
snR50snR50 YOP1Q12402 180 aa-0.36□□□□□ -2.47
snR50snR50 PRP8P33334 2413 aaKnown RBP-0.36□□□□□ -2.47
snR50snR50 CBP2P03874 630 aaPredicted RBP-0.37□□□□□ -2.47
snR50snR50 CBS1P14066 229 aa-0.37□□□□□ -2.47
snR50snR50 MDH1P17505 334 aaKnown RBP RIP-Chip data-0.37□□□□□ -2.47not detected
snR50snR50 ROX1P25042 368 aa-0.37□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms