RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	YDR018C	Q12185	396 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	TPO4	Q12256	659 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	TRM13	Q12383	476 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	RRD2	Q12461	358 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	RRI1	Q12468	440 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	MRPL23	Q12487	163 aa	Predicted RBP	4.23	□□□□□ -1.73
TRM44	YPL030W	RMD5	Q12508	421 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	YPR014C	Q6B0W2	109 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	MED11	Q99278	115 aa		4.23	□□□□□ -1.73
TRM44	YPL030W	ADH2	P00331	348 aa	Known RBP	4.22	□□□□□ -1.73
TRM44	YPL030W	CAN1	P04817	590 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	TPK1	P06244	397 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	CBP1	P07252	654 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	BCY1	P07278	416 aa	Known RBP	4.22	□□□□□ -1.73
TRM44	YPL030W	SNF3	P10870	884 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	CKA1	P15790	372 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	PDA1	P16387	420 aa	Known RBP	4.22	□□□□□ -1.73
TRM44	YPL030W	PRE9	P23638	258 aa	Known RBP	4.22	□□□□□ -1.73
TRM44	YPL030W	DAL2	P25335	343 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
TRM44	YPL030W	HIS7	P33734	552 aa	Known RBP	4.22	□□□□□ -1.73
TRM44	YPL030W	SKT5	P34226	696 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	ASH1	P34233	588 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	SHM1	P37292	490 aa	Predicted RBP	4.22	□□□□□ -1.73
TRM44	YPL030W	MSC7	P38694	644 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	VPS52	P39904	641 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	ACA1	P39970	489 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	FAU1	P40099	211 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	SLZ1	P40167	298 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	PRK1	P40494	810 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	YIL067C	P40514	678 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	ALY2	P47029	1046 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	GPI14	P47088	403 aa	Known RBP	4.22	□□□□□ -1.73
TRM44	YPL030W	MRPL1	Q04599	285 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	NUT2	Q06213	157 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	YPS7	Q06325	596 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	MRX9	Q07349	420 aa	Known RBP	4.22	□□□□□ -1.73
TRM44	YPL030W	THI72	Q08579	599 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	TCO89	Q08921	799 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	MDM32	Q12171	622 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	COA6	Q3E846	104 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	BCK1	Q01389	1478 aa		4.22	□□□□□ -1.73
TRM44	YPL030W	BAR1	P12630	587 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	FUN14	P18411	198 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	DAL82	P21705	255 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	SUA7	P29055	345 aa	Predicted RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	BEM1	P29366	551 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	UTR4	P32626	227 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	UGP1	P32861	499 aa	Known RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	TRS65	P32893	560 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	LST4	P34239	828 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	YET1	P35723	206 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	PTK1	P36002	662 aa	Predicted RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	YKL071W	P36086	256 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	IRS4	P36115	615 aa	Known RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	VBA5	P36172	582 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	SOL2	P37262	315 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	PDX3	P38075	228 aa	Known RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	BNA4	P38169	460 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	ZTA1	P38230	334 aa	Known RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	EXO5	P38289	585 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	IPI1	P38803	334 aa	Predicted RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	ELO3	P40319	345 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	SWM2	P40342	146 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	YKE4	P40544	346 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	RPS12	P48589	143 aa	Known RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	AVT4	P50944	713 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	COS10	P52924	374 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	TIM21	P53220	239 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	SPC98	P53540	846 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	YNR066C	P53752	436 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	STP1	Q00947	519 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	RPA49	Q01080	415 aa	Predicted RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	EKI1	Q03764	534 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	GIS1	Q03833	894 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	DUS4	Q06063	367 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	ATG39	Q06159	398 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	YLR179C	Q06252	201 aa	Known RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	CDD1	Q06549	142 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	YOR365C	Q08844	703 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	YPR202W	Q08993	238 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	RIM20	Q12033	661 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	FCF2	Q12035	217 aa	Predicted RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	YOR342C	Q12182	319 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	ERG27	Q12452	347 aa	Known RBP	4.21	□□□□□ -1.73
TRM44	YPL030W	PTC5	Q12511	572 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	YLR361C-A	Q3E795	98 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	YLR099W-A	Q3E798	87 aa		4.21	□□□□□ -1.73
TRM44	YPL030W	IML1	P47170	1584 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	TPK3	P05986	398 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	DDI2	P0CH63	225 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	DDI3	P0CH64	225 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	RAD18	P10862	487 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	NHP6B	P11633	99 aa	Known RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	SNF4	P12904	322 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	GRX1	P25373	110 aa	Known RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	ARO4	P32449	370 aa	Known RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	SPR1	P32603	445 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	PDC2	P32896	925 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	DTR1	P38125	572 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms