RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C MPP10P47083 593 aaKnown RBP2.98□□□□□ -1.93
WHI3YNL197C SPO19Q03029 223 aa2.98□□□□□ -1.93
WHI3YNL197C RTN1Q04947 295 aaKnown RBP2.98□□□□□ -1.93
WHI3YNL197C RRG8Q06109 277 aa2.98□□□□□ -1.93
WHI3YNL197C YPR091CQ06833 770 aa2.98□□□□□ -1.93
WHI3YNL197C MFG1Q07684 458 aa2.98□□□□□ -1.93
WHI3YNL197C SMC5Q08204 1093 aa2.98□□□□□ -1.93
WHI3YNL197C SLM3Q12093 417 aa2.98□□□□□ -1.93
WHI3YNL197C EAF3Q12432 401 aa2.98□□□□□ -1.93
WHI3YNL197C MEX67Q99257 599 aaKnown RBP2.98□□□□□ -1.93
WHI3YNL197C SAL1D6W196 494 aa2.98□□□□□ -1.93
WHI3YNL197C YBL059WP34224 193 aa2.98□□□□□ -1.93
WHI3YNL197C YKL162CP36052 402 aa2.98□□□□□ -1.93
WHI3YNL197C ANR2P36090 516 aaPredicted RBP2.98□□□□□ -1.93
WHI3YNL197C NDT80P38830 627 aa2.98□□□□□ -1.93
WHI3YNL197C RPN14P53196 417 aa2.98□□□□□ -1.93
WHI3YNL197C PRM6Q04705 352 aa2.98□□□□□ -1.93
WHI3YNL197C YHC1Q05900 231 aaKnown RBP2.98□□□□□ -1.93
WHI3YNL197C RIF2Q06208 395 aa2.98□□□□□ -1.93
WHI3YNL197C ALE1Q08548 619 aa2.98□□□□□ -1.93
WHI3YNL197C MCT1Q12283 360 aa2.98□□□□□ -1.93
WHI3YNL197C MSI1P13712 422 aa2.97□□□□□ -1.93
WHI3YNL197C RAD5P32849 1169 aaPredicted RBP2.97□□□□□ -1.93
WHI3YNL197C AVT5P38176 459 aa2.97□□□□□ -1.93
WHI3YNL197C YPT35P38815 214 aaKnown RBP2.97□□□□□ -1.93
WHI3YNL197C PTH1P38876 190 aaKnown RBP2.97□□□□□ -1.93
WHI3YNL197C HEM14P40012 539 aa2.97□□□□□ -1.93
WHI3YNL197C MEP2P41948 499 aa2.97□□□□□ -1.93
WHI3YNL197C YFL040WP43562 540 aa2.97□□□□□ -1.93
WHI3YNL197C YGL185CP53100 379 aa2.97□□□□□ -1.93
WHI3YNL197C MST27P53176 234 aa2.97□□□□□ -1.93
WHI3YNL197C IMP4P53941 290 aaKnown RBP2.97□□□□□ -1.93
WHI3YNL197C YTH1Q06102 208 aaPredicted RBP2.97□□□□□ -1.93
WHI3YNL197C PFK27Q12471 397 aaPredicted RBP2.97□□□□□ -1.93
WHI3YNL197C MRPL23Q12487 163 aaPredicted RBP2.97□□□□□ -1.93
WHI3YNL197C RGS2Q99188 309 aa2.97□□□□□ -1.93
WHI3YNL197C PHO2P07269 559 aa2.96□□□□□ -1.94
WHI3YNL197C PUT4P15380 627 aa2.96□□□□□ -1.94
WHI3YNL197C RPB5P20434 215 aa2.96□□□□□ -1.94
WHI3YNL197C YUR1P26725 428 aa2.96□□□□□ -1.94
WHI3YNL197C ERG9P29704 444 aa2.96□□□□□ -1.94
WHI3YNL197C PAD1P33751 242 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
WHI3YNL197C RBG1P39729 369 aa2.96□□□□□ -1.94
WHI3YNL197C INA22P40576 216 aa2.96□□□□□ -1.94
WHI3YNL197C EGT2P42835 1041 aa2.96□□□□□ -1.94
WHI3YNL197C MTQ1P53944 314 aa2.96□□□□□ -1.94
WHI3YNL197C ERV41Q04651 352 aa2.96□□□□□ -1.94
WHI3YNL197C YLR413WQ06689 675 aa2.96□□□□□ -1.94
WHI3YNL197C YDL199CQ12407 687 aa2.96□□□□□ -1.94
WHI3YNL197C PCL9Q12477 304 aa2.96□□□□□ -1.94
WHI3YNL197C HHF1P02309 103 aaKnown RBP2.96□□□□□ -1.94
WHI3YNL197C CAR2P07991 424 aaKnown RBP2.96□□□□□ -1.94
WHI3YNL197C GAL7P08431 366 aa2.96□□□□□ -1.94
WHI3YNL197C UGA1P17649 471 aa2.96□□□□□ -1.94
WHI3YNL197C CPR3P25719 182 aa2.96□□□□□ -1.94
WHI3YNL197C EBP2P36049 427 aaKnown RBP2.96□□□□□ -1.94
WHI3YNL197C FET3P38993 636 aa2.96□□□□□ -1.94
WHI3YNL197C SCS3P53012 380 aa2.96□□□□□ -1.94
WHI3YNL197C VOA1P53262 265 aa2.96□□□□□ -1.94
WHI3YNL197C ALF1P53904 254 aa2.96□□□□□ -1.94
WHI3YNL197C EGD1Q02642 157 aaKnown RBP2.96□□□□□ -1.94
WHI3YNL197C YMR111CQ04461 462 aaPredicted RBP2.96□□□□□ -1.94
WHI3YNL197C DCP1Q12517 231 aaPredicted RBP2.96□□□□□ -1.94
WHI3YNL197C DCC1P25559 380 aa2.95□□□□□ -1.94
WHI3YNL197C ARO2P28777 376 aaKnown RBP2.95□□□□□ -1.94
WHI3YNL197C MMS21P38632 267 aa2.95□□□□□ -1.94
WHI3YNL197C YHR182WP38870 785 aa2.95□□□□□ -1.94
WHI3YNL197C ATG18P43601 500 aa2.95□□□□□ -1.94
WHI3YNL197C TAF6P53040 516 aa2.95□□□□□ -1.94
WHI3YNL197C LSG1P53145 640 aaKnown RBP2.95□□□□□ -1.94
WHI3YNL197C SHY1P53266 389 aa2.95□□□□□ -1.94
WHI3YNL197C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
WHI3YNL197C RVB1Q03940 463 aaKnown RBP2.95□□□□□ -1.94
WHI3YNL197C HRI1Q05905 244 aaKnown RBP2.95□□□□□ -1.94
WHI3YNL197C BUR2Q05949 395 aa2.95□□□□□ -1.94
WHI3YNL197C SUP35P05453 685 aaKnown RBP2.94□□□□□ -1.94
WHI3YNL197C PET123P17558 318 aa2.94□□□□□ -1.94
WHI3YNL197C RPL16AP26784 199 aaKnown RBP2.94□□□□□ -1.94
WHI3YNL197C DEG1P31115 442 aaKnown RBP2.94□□□□□ -1.94
WHI3YNL197C RAD23P32628 398 aaKnown RBP2.94□□□□□ -1.94
WHI3YNL197C YKR015CP36111 568 aa2.94□□□□□ -1.94
WHI3YNL197C RCK2P38623 610 aa2.94□□□□□ -1.94
WHI3YNL197C UTP25P40498 721 aaKnown RBP2.94□□□□□ -1.94
WHI3YNL197C YJR030CP47101 745 aa2.94□□□□□ -1.94
WHI3YNL197C YGR168CP53293 376 aa2.94□□□□□ -1.94
WHI3YNL197C DNL4Q08387 944 aaPredicted RBP2.94□□□□□ -1.94
WHI3YNL197C RPN6Q12377 434 aa2.94□□□□□ -1.94
WHI3YNL197C ADH2P00331 348 aaKnown RBP2.94□□□□□ -1.94
WHI3YNL197C DAL2P25335 343 aa2.94□□□□□ -1.94
WHI3YNL197C PMT2P31382 759 aa2.94□□□□□ -1.94
WHI3YNL197C VMA5P31412 392 aaKnown RBP2.94□□□□□ -1.94
WHI3YNL197C HXT1P32465 570 aa2.94□□□□□ -1.94
WHI3YNL197C YKL070WP36087 169 aa2.94□□□□□ -1.94
WHI3YNL197C ECM8P38246 354 aa2.94□□□□□ -1.94
WHI3YNL197C VPS45P38932 577 aa2.94□□□□□ -1.94
WHI3YNL197C MAM33P40513 266 aa2.94□□□□□ -1.94
WHI3YNL197C PXR1P53335 271 aaPredicted RBP2.94□□□□□ -1.94
WHI3YNL197C CMS1Q07897 291 aaKnown RBP2.94□□□□□ -1.94
WHI3YNL197C FRE8Q12209 686 aa2.94□□□□□ -1.94
WHI3YNL197C JID1Q12350 301 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms