RNA–Protein interactions for RNA: YNL105W

RRT16, Transcript of Dubious open reading frame, yeastyeast

Gene RRT16, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT16YNL105W BAT1P38891 393 aaKnown RBP2.4□□□□□ -2.03
RRT16YNL105W YMR134WP40207 237 aa2.4□□□□□ -2.03
RRT16YNL105W YGR210CP42942 411 aa2.4□□□□□ -2.03
RRT16YNL105W LOC1P43586 204 aaPredicted RBP2.4□□□□□ -2.03
RRT16YNL105W ATG18P43601 500 aa2.4□□□□□ -2.03
RRT16YNL105W RIB4P50861 169 aaPredicted RBP2.4□□□□□ -2.03
RRT16YNL105W DBP6P53734 629 aaKnown RBP2.4□□□□□ -2.03
RRT16YNL105W TRM112P53738 135 aaPredicted RBP2.4□□□□□ -2.03
RRT16YNL105W YNL146WP53906 100 aa2.4□□□□□ -2.03
RRT16YNL105W MTQ1P53944 314 aa2.4□□□□□ -2.03
RRT16YNL105W RTN1Q04947 295 aaKnown RBP2.4□□□□□ -2.03
RRT16YNL105W RIF2Q06208 395 aa2.4□□□□□ -2.03
RRT16YNL105W SMC5Q08204 1093 aa2.4□□□□□ -2.03
RRT16YNL105W APC5Q08683 685 aa2.4□□□□□ -2.03
RRT16YNL105W PLP2Q12017 286 aa2.4□□□□□ -2.03
RRT16YNL105W FCY22Q12119 530 aa2.4□□□□□ -2.03
RRT16YNL105W GLE1Q12315 538 aa2.4□□□□□ -2.03
RRT16YNL105W IZH2Q12442 317 aa2.4□□□□□ -2.03
RRT16YNL105W SAL1D6W196 494 aa2.39□□□□□ -2.03
RRT16YNL105W YLL053CP0CD98 152 aa2.39□□□□□ -2.03
RRT16YNL105W RPL18AP0CX49 186 aaKnown RBP2.39□□□□□ -2.03
RRT16YNL105W RPL18BP0CX50 186 aaKnown RBP2.39□□□□□ -2.03
RRT16YNL105W PET18P25362 215 aa2.39□□□□□ -2.03
RRT16YNL105W MKK1P32490 508 aa2.39□□□□□ -2.03
RRT16YNL105W RAD5P32849 1169 aaPredicted RBP2.39□□□□□ -2.03
RRT16YNL105W YKL162CP36052 402 aa2.39□□□□□ -2.03
RRT16YNL105W ECM8P38246 354 aa2.39□□□□□ -2.03
RRT16YNL105W RTC2P38279 296 aa2.39□□□□□ -2.03
RRT16YNL105W SWC5P38326 303 aa2.39□□□□□ -2.03
RRT16YNL105W MNN9P39107 395 aaKnown RBP2.39□□□□□ -2.03
RRT16YNL105W BTT1P40314 149 aaPredicted RBP2.39□□□□□ -2.03
RRT16YNL105W YFR018CP43599 363 aa2.39□□□□□ -2.03
RRT16YNL105W GCD14P46959 383 aaPredicted RBP2.39□□□□□ -2.03
RRT16YNL105W TRF5P48561 642 aaKnown RBP2.39□□□□□ -2.03
RRT16YNL105W LSG1P53145 640 aaKnown RBP2.39□□□□□ -2.03
RRT16YNL105W CRH1P53301 507 aa2.39□□□□□ -2.03
RRT16YNL105W CAB5Q03941 241 aa2.39□□□□□ -2.03
RRT16YNL105W PRM6Q04705 352 aa2.39□□□□□ -2.03
RRT16YNL105W NDE2Q07500 545 aa2.39□□□□□ -2.03
RRT16YNL105W YDL114WQ07530 308 aa2.39□□□□□ -2.03
RRT16YNL105W RBD2Q12270 262 aa2.39□□□□□ -2.03
RRT16YNL105W HRT3Q12347 344 aa2.39□□□□□ -2.03
RRT16YNL105W HIF1Q12373 385 aa2.39□□□□□ -2.03
RRT16YNL105W PAA1Q12447 191 aaKnown RBP2.39□□□□□ -2.03
RRT16YNL105W MEX67Q99257 599 aaKnown RBP2.39□□□□□ -2.03
RRT16YNL105W RPS14AP06367 137 aaKnown RBP2.38□□□□□ -2.03
RRT16YNL105W NAM2P11325 894 aa2.38□□□□□ -2.03
RRT16YNL105W GCD2P12754 651 aaPredicted RBP2.38□□□□□ -2.03
RRT16YNL105W MSS116P15424 664 aaKnown RBP2.38□□□□□ -2.03
RRT16YNL105W BUD2P33314 1104 aa2.38□□□□□ -2.03
RRT16YNL105W PAD1P33751 242 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
RRT16YNL105W MRPL40P36534 297 aa2.38□□□□□ -2.03
RRT16YNL105W IML3P38265 245 aa2.38□□□□□ -2.03
RRT16YNL105W SMF2P38778 549 aa2.38□□□□□ -2.03
RRT16YNL105W YPT35P38815 214 aaKnown RBP2.38□□□□□ -2.03
RRT16YNL105W END3P39013 349 aa2.38□□□□□ -2.03
RRT16YNL105W RPS14BP39516 138 aaKnown RBP2.38□□□□□ -2.03
RRT16YNL105W SHY1P53266 389 aa2.38□□□□□ -2.03
RRT16YNL105W VTI1Q04338 217 aa2.38□□□□□ -2.03
RRT16YNL105W YMR111CQ04461 462 aaPredicted RBP2.38□□□□□ -2.03
RRT16YNL105W LOT6Q07923 191 aa2.38□□□□□ -2.03
RRT16YNL105W PCL9Q12477 304 aa2.38□□□□□ -2.03
RRT16YNL105W RRP36Q12481 300 aaPredicted RBP2.38□□□□□ -2.03
RRT16YNL105W INO80P53115 1489 aa2.38□□□□□ -2.03
RRT16YNL105W ARF2P19146 181 aaKnown RBP2.37□□□□□ -2.03
RRT16YNL105W RPB5P20434 215 aa2.37□□□□□ -2.03
RRT16YNL105W PMT2P31382 759 aa2.37□□□□□ -2.03
RRT16YNL105W MYO3P36006 1272 aa2.37□□□□□ -2.03
RRT16YNL105W RCK2P38623 610 aa2.37□□□□□ -2.03
RRT16YNL105W MMS21P38632 267 aa2.37□□□□□ -2.03
RRT16YNL105W FET3P38993 636 aa2.37□□□□□ -2.03
RRT16YNL105W AIM10P39965 576 aaKnown RBP2.37□□□□□ -2.03
RRT16YNL105W MAM33P40513 266 aa2.37□□□□□ -2.03
RRT16YNL105W HAC1P41546 238 aa2.37□□□□□ -2.03
RRT16YNL105W YJR030CP47101 745 aa2.37□□□□□ -2.03
RRT16YNL105W BIR1P47134 954 aa2.37□□□□□ -2.03
RRT16YNL105W REX2P54964 269 aaKnown RBP2.37□□□□□ -2.03
RRT16YNL105W YLR297WQ05899 129 aa2.37□□□□□ -2.03
RRT16YNL105W RRG7Q08774 242 aaPredicted RBP2.37□□□□□ -2.03
RRT16YNL105W YDL109CQ12103 647 aa2.37□□□□□ -2.03
RRT16YNL105W FRE8Q12209 686 aa2.37□□□□□ -2.03
RRT16YNL105W RPN6Q12377 434 aa2.37□□□□□ -2.03
RRT16YNL105W NAG1Q8TGN9 163 aa2.37□□□□□ -2.03
RRT16YNL105W RPL23AP0CX41 137 aaKnown RBP2.36□□□□□ -2.03
RRT16YNL105W RPL23BP0CX42 137 aaKnown RBP2.36□□□□□ -2.03
RRT16YNL105W RPS18AP0CX55 146 aaKnown RBP2.36□□□□□ -2.03
RRT16YNL105W RPS18BP0CX56 146 aaPredicted RBP2.36□□□□□ -2.03
RRT16YNL105W ERG9P29704 444 aa2.36□□□□□ -2.03
RRT16YNL105W MRPL10P36520 322 aa2.36□□□□□ -2.03
RRT16YNL105W DTR1P38125 572 aa2.36□□□□□ -2.03
RRT16YNL105W YHR182WP38870 785 aa2.36□□□□□ -2.03
RRT16YNL105W RBG1P39729 369 aa2.36□□□□□ -2.03
RRT16YNL105W MIG3P39943 394 aa2.36□□□□□ -2.03
RRT16YNL105W CDC40P40968 455 aaPredicted RBP2.36□□□□□ -2.03
RRT16YNL105W YFL040WP43562 540 aa2.36□□□□□ -2.03
RRT16YNL105W AIP1P46680 615 aaKnown RBP2.36□□□□□ -2.03
RRT16YNL105W YGL185CP53100 379 aa2.36□□□□□ -2.03
RRT16YNL105W PNC1P53184 216 aaKnown RBP2.36□□□□□ -2.03
RRT16YNL105W CLD1P53264 445 aa2.36□□□□□ -2.03
RRT16YNL105W PXR1P53335 271 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms