RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W BIO4P53630 237 aa4.46□□□□□ -1.7
ROT1YMR200W TRM112P53738 135 aaPredicted RBP4.46□□□□□ -1.7
ROT1YMR200W ALG11P53954 548 aaKnown RBP4.46□□□□□ -1.7
ROT1YMR200W SAM50P53969 484 aa4.46□□□□□ -1.7
ROT1YMR200W NUP116Q02630 1113 aa4.46□□□□□ -1.7
ROT1YMR200W MMT1Q03218 510 aa4.46□□□□□ -1.7
ROT1YMR200W NAT4Q04751 285 aa4.46□□□□□ -1.7
ROT1YMR200W YDR222WQ04925 415 aa4.46□□□□□ -1.7
ROT1YMR200W DCR2Q05924 578 aa4.46□□□□□ -1.7
ROT1YMR200W SPO77Q06134 477 aa4.46□□□□□ -1.7
ROT1YMR200W VPS74Q06385 345 aa4.46□□□□□ -1.7
ROT1YMR200W RAD34Q06665 692 aa4.46□□□□□ -1.7
ROT1YMR200W BER1Q06688 274 aaKnown RBP4.46□□□□□ -1.7
ROT1YMR200W TLG2Q08144 397 aa4.46□□□□□ -1.7
ROT1YMR200W ERP3Q12403 225 aa4.46□□□□□ -1.7
ROT1YMR200W HPR1P17629 752 aaKnown RBP4.45□□□□□ -1.7
ROT1YMR200W UTR1P21373 530 aa4.45□□□□□ -1.7
ROT1YMR200W YCR006CP25350 157 aa4.45□□□□□ -1.7
ROT1YMR200W ADE1P27616 306 aa4.45□□□□□ -1.7
ROT1YMR200W PEX3P28795 441 aa4.45□□□□□ -1.7
ROT1YMR200W ZUO1P32527 433 aaKnown RBP4.45□□□□□ -1.7
ROT1YMR200W MRPS5P33759 307 aa4.45□□□□□ -1.7
ROT1YMR200W RTC3P38804 111 aaPredicted RBP4.45□□□□□ -1.7
ROT1YMR200W YAL037WP39728 267 aa4.45□□□□□ -1.7
ROT1YMR200W EXO1P39875 702 aa4.45□□□□□ -1.7
ROT1YMR200W ISC1P40015 477 aaKnown RBP4.45□□□□□ -1.7
ROT1YMR200W YIL001WP40560 513 aa4.45□□□□□ -1.7
ROT1YMR200W PSA1P41940 361 aaKnown RBP4.45□□□□□ -1.7
ROT1YMR200W NAS6P50086 228 aa4.45□□□□□ -1.7
ROT1YMR200W SEH1P53011 349 aaKnown RBP4.45□□□□□ -1.7
ROT1YMR200W YOR389WQ08912 624 aa4.45□□□□□ -1.7
ROT1YMR200W ATG34Q12292 412 aa4.45□□□□□ -1.7
ROT1YMR200W NCB2Q92317 146 aa4.45□□□□□ -1.7
ROT1YMR200W BAR1P12630 587 aa4.44□□□□□ -1.7
ROT1YMR200W REV1P12689 985 aa4.44□□□□□ -1.7
ROT1YMR200W CMK2P22517 447 aa4.44□□□□□ -1.7
ROT1YMR200W MNS1P32906 549 aa4.44□□□□□ -1.7
ROT1YMR200W FHL1P39521 936 aa4.44□□□□□ -1.7
ROT1YMR200W ERG28P40030 148 aa4.44□□□□□ -1.7
ROT1YMR200W YRB1P41920 201 aaKnown RBP4.44□□□□□ -1.7
ROT1YMR200W YGR210CP42942 411 aa4.44□□□□□ -1.7
ROT1YMR200W AGP3P43548 558 aa4.44□□□□□ -1.7
ROT1YMR200W YJR154WP47181 346 aa4.44□□□□□ -1.7
ROT1YMR200W TAF6P53040 516 aa4.44□□□□□ -1.7
ROT1YMR200W PKP2P53170 491 aa4.44□□□□□ -1.7
ROT1YMR200W OST6Q03723 332 aa4.44□□□□□ -1.7
ROT1YMR200W KRE28Q04431 385 aa4.44□□□□□ -1.7
ROT1YMR200W CDC123Q05791 360 aa4.44□□□□□ -1.7
ROT1YMR200W ORM2Q06144 216 aa4.44□□□□□ -1.7
ROT1YMR200W PBP4Q07362 185 aaKnown RBP4.44□□□□□ -1.7
ROT1YMR200W REX4Q08237 289 aa4.44□□□□□ -1.7
ROT1YMR200W HIS4P00815 799 aaKnown RBP4.43□□□□□ -1.7
ROT1YMR200W SPS19P32573 292 aaKnown RBP4.43□□□□□ -1.7
ROT1YMR200W AST1P35183 429 aa4.43□□□□□ -1.7
ROT1YMR200W SWD2P36104 329 aaPredicted RBP4.43□□□□□ -1.7
ROT1YMR200W SHO1P40073 367 aa4.43□□□□□ -1.7
ROT1YMR200W YIL060WP40519 144 aa4.43□□□□□ -1.7
ROT1YMR200W CDC1P40986 491 aa4.43□□□□□ -1.7
ROT1YMR200W HMS2P47175 358 aa4.43□□□□□ -1.7
ROT1YMR200W TOS2P50078 622 aa4.43□□□□□ -1.7
ROT1YMR200W PHB2P50085 310 aa4.43□□□□□ -1.7
ROT1YMR200W PCP1P53259 346 aa4.43□□□□□ -1.7
ROT1YMR200W GPI15P53961 229 aa4.43□□□□□ -1.7
ROT1YMR200W PRM15Q03262 622 aa4.43□□□□□ -1.7
ROT1YMR200W SNA4Q07549 140 aa4.43□□□□□ -1.7
ROT1YMR200W GRE1Q08969 168 aa4.43□□□□□ -1.7
ROT1YMR200W YLR108CQ12259 485 aa4.43□□□□□ -1.7
ROT1YMR200W YOR338WQ99326 363 aa4.43□□□□□ -1.7
ROT1YMR200W SUC2P00724 532 aa4.42□□□□□ -1.7
ROT1YMR200W TPK3P05986 398 aa4.42□□□□□ -1.7
ROT1YMR200W RPL35AP0CX84 120 aaKnown RBP4.42□□□□□ -1.7
ROT1YMR200W RPL35BP0CX85 120 aaKnown RBP4.42□□□□□ -1.7
ROT1YMR200W POX1P13711 748 aa4.42□□□□□ -1.7
ROT1YMR200W SNF6P18888 332 aa4.42□□□□□ -1.7
ROT1YMR200W DPB2P24482 689 aaPredicted RBP4.42□□□□□ -1.7
ROT1YMR200W CTR86P25355 563 aa4.42□□□□□ -1.7
ROT1YMR200W PPZ1P26570 692 aa4.42□□□□□ -1.7
ROT1YMR200W IES6P32617 166 aa4.42□□□□□ -1.7
ROT1YMR200W COX13P32799 129 aa4.42□□□□□ -1.7
ROT1YMR200W YKL097CP34245 136 aa4.42□□□□□ -1.7
ROT1YMR200W YBR056WP38081 501 aa4.42□□□□□ -1.7
ROT1YMR200W LAG1P38703 411 aa4.42□□□□□ -1.7
ROT1YMR200W YNL194CP40169 301 aa4.42□□□□□ -1.7
ROT1YMR200W SLM1P40485 686 aa4.42□□□□□ -1.7
ROT1YMR200W ERG10P41338 398 aaKnown RBP4.42□□□□□ -1.7
ROT1YMR200W CWC23P52868 283 aaPredicted RBP4.42□□□□□ -1.7
ROT1YMR200W LSG1P53145 640 aaKnown RBP4.42□□□□□ -1.7
ROT1YMR200W PXR1P53335 271 aaPredicted RBP4.42□□□□□ -1.7
ROT1YMR200W SSU72P53538 206 aaPredicted RBP4.42□□□□□ -1.7
ROT1YMR200W ZRG17P53735 605 aa4.42□□□□□ -1.7
ROT1YMR200W MTQ1P53944 314 aa4.42□□□□□ -1.7
ROT1YMR200W SED5Q01590 340 aa4.42□□□□□ -1.7
ROT1YMR200W YPL014WQ02606 381 aa4.42□□□□□ -1.7
ROT1YMR200W GPM2Q12008 311 aa4.42□□□□□ -1.7
ROT1YMR200W SNF8Q12483 233 aa4.42□□□□□ -1.7
ROT1YMR200W SET6Q12529 373 aa4.42□□□□□ -1.7
ROT1YMR200W HIS1P00498 297 aaKnown RBP4.41□□□□□ -1.7
ROT1YMR200W HTB1P02293 131 aaKnown RBP4.41□□□□□ -1.7
ROT1YMR200W HTB2P02294 131 aa4.41□□□□□ -1.7
ROT1YMR200W HEM2P05373 342 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms