RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C WTM1Q12363 437 aaKnown RBP4.34□□□□□ -1.71
EAR1YMR171C SPT3P06844 337 aa4.33□□□□□ -1.72
EAR1YMR171C PUT2P07275 575 aa4.33□□□□□ -1.72
EAR1YMR171C YAP1P19880 650 aaKnown RBP4.33□□□□□ -1.72
EAR1YMR171C RBK1P25332 333 aa4.33□□□□□ -1.72
EAR1YMR171C LAC1P28496 418 aa4.33□□□□□ -1.72
EAR1YMR171C HCS1P34243 683 aa4.33□□□□□ -1.72
EAR1YMR171C MRPL40P36534 297 aa4.33□□□□□ -1.72
EAR1YMR171C YCR087C-AP37263 153 aa4.33□□□□□ -1.72
EAR1YMR171C YBR056WP38081 501 aa4.33□□□□□ -1.72
EAR1YMR171C ARN2P38724 620 aa4.33□□□□□ -1.72
EAR1YMR171C PSD1P39006 500 aa4.33□□□□□ -1.72
EAR1YMR171C SER33P40510 469 aa4.33□□□□□ -1.72
EAR1YMR171C IME4P41833 600 aa4.33□□□□□ -1.72
EAR1YMR171C HOC1P47124 396 aa4.33□□□□□ -1.72
EAR1YMR171C VPS25P47142 202 aa4.33□□□□□ -1.72
EAR1YMR171C CWC23P52868 283 aaPredicted RBP4.33□□□□□ -1.72
EAR1YMR171C AAT1Q01802 451 aa4.33□□□□□ -1.72
EAR1YMR171C ATG38Q05789 226 aaKnown RBP4.33□□□□□ -1.72
EAR1YMR171C GRS2Q06817 618 aa4.33□□□□□ -1.72
EAR1YMR171C LEA1Q08963 238 aaPredicted RBP4.33□□□□□ -1.72
EAR1YMR171C RPN5Q12250 445 aaKnown RBP4.33□□□□□ -1.72
EAR1YMR171C HSP42Q12329 375 aa4.33□□□□□ -1.72
EAR1YMR171C PST2Q12335 198 aaKnown RBP4.33□□□□□ -1.72
EAR1YMR171C YDL199CQ12407 687 aa4.33□□□□□ -1.72
EAR1YMR171C YKL018C-AQ3E7A7 99 aa4.33□□□□□ -1.72
EAR1YMR171C YLR302CO13544 120 aa4.32□□□□□ -1.72
EAR1YMR171C SCH9P11792 824 aaKnown RBP4.32□□□□□ -1.72
EAR1YMR171C GAL3P13045 520 aa4.32□□□□□ -1.72
EAR1YMR171C DAP2P18962 818 aa4.32□□□□□ -1.72
EAR1YMR171C RPL24BP24000 155 aaKnown RBP4.32□□□□□ -1.72
EAR1YMR171C GIT1P25346 518 aa4.32□□□□□ -1.72
EAR1YMR171C YCR016WP25617 290 aaKnown RBP4.32□□□□□ -1.72
EAR1YMR171C PTC6P25646 442 aa4.32□□□□□ -1.72
EAR1YMR171C HIR2P32480 875 aa4.32□□□□□ -1.72
EAR1YMR171C VPH1P32563 840 aaKnown RBP4.32□□□□□ -1.72
EAR1YMR171C MNN9P39107 395 aaKnown RBP4.32□□□□□ -1.72
EAR1YMR171C ERV46P39727 415 aa4.32□□□□□ -1.72
EAR1YMR171C MNT3P40549 630 aa4.32□□□□□ -1.72
EAR1YMR171C UFE1P41834 346 aa4.32□□□□□ -1.72
EAR1YMR171C PTR3P43606 678 aa4.32□□□□□ -1.72
EAR1YMR171C SIP4P46954 829 aa4.32□□□□□ -1.72
EAR1YMR171C TAX4P47030 604 aa4.32□□□□□ -1.72
EAR1YMR171C UBX6P47049 396 aa4.32□□□□□ -1.72
EAR1YMR171C MSY1P48527 492 aa4.32□□□□□ -1.72
EAR1YMR171C ARO8P53090 500 aaKnown RBP4.32□□□□□ -1.72
EAR1YMR171C YAT1P80235 687 aa4.32□□□□□ -1.72
EAR1YMR171C NUP49Q02199 472 aa4.32□□□□□ -1.72
EAR1YMR171C ABZ2Q03266 374 aa4.32□□□□□ -1.72
EAR1YMR171C GRX3Q03835 250 aa4.32□□□□□ -1.72
EAR1YMR171C FIN1Q03898 291 aa4.32□□□□□ -1.72
EAR1YMR171C RAD34Q06665 692 aa4.32□□□□□ -1.72
EAR1YMR171C YLR012CQ07927 99 aa4.32□□□□□ -1.72
EAR1YMR171C YDR056CQ12025 205 aa4.32□□□□□ -1.72
EAR1YMR171C SMF3Q12078 473 aaPredicted RBP4.32□□□□□ -1.72
EAR1YMR171C YGK3Q12222 375 aaPredicted RBP4.32□□□□□ -1.72
EAR1YMR171C RBD2Q12270 262 aa4.32□□□□□ -1.72
EAR1YMR171C SNF8Q12483 233 aa4.32□□□□□ -1.72
EAR1YMR171C YCL012CQ8J0M4 134 aa4.32□□□□□ -1.72
EAR1YMR171C DST1P07273 309 aa4.32□□□□□ -1.72
EAR1YMR171C MET8P15807 274 aa4.32□□□□□ -1.72
EAR1YMR171C IDP1P21954 428 aaKnown RBP4.32□□□□□ -1.72
EAR1YMR171C DBF2P22204 572 aa4.32□□□□□ -1.72
EAR1YMR171C ERG8P24521 451 aa4.32□□□□□ -1.72
EAR1YMR171C HMT1P38074 348 aa4.32□□□□□ -1.72
EAR1YMR171C BMT2P38278 337 aa4.32□□□□□ -1.72
EAR1YMR171C YBR225WP38321 900 aa4.32□□□□□ -1.72
EAR1YMR171C ATG7P38862 630 aa4.32□□□□□ -1.72
EAR1YMR171C COG3P40094 801 aa4.32□□□□□ -1.72
EAR1YMR171C ARF3P40994 183 aaRIP-Chip data4.32□□□□□ -1.72not detected
EAR1YMR171C TES1P41903 349 aaKnown RBP4.32□□□□□ -1.72
EAR1YMR171C TRM112P53738 135 aaPredicted RBP4.32□□□□□ -1.72
EAR1YMR171C YNL143CP53908 130 aa4.32□□□□□ -1.72
EAR1YMR171C TIM11P81449 96 aaPredicted RBP4.32□□□□□ -1.72
EAR1YMR171C PIR3Q03180 325 aa4.32□□□□□ -1.72
EAR1YMR171C BAG7Q12128 409 aa4.32□□□□□ -1.72
EAR1YMR171C YPL119C-AQ3E751 87 aa4.32□□□□□ -1.72
EAR1YMR171C CAP2P13517 287 aa4.31□□□□□ -1.72
EAR1YMR171C MRPL8P22353 238 aa4.31□□□□□ -1.72
EAR1YMR171C RHB1P25378 209 aa4.31□□□□□ -1.72
EAR1YMR171C ACH1P32316 526 aa4.31□□□□□ -1.72
EAR1YMR171C SGE1P33335 543 aa4.31□□□□□ -1.72
EAR1YMR171C TIP20P33891 701 aa4.31□□□□□ -1.72
EAR1YMR171C GPX2P38143 162 aa4.31□□□□□ -1.72
EAR1YMR171C RCK1P38622 512 aa4.31□□□□□ -1.72
EAR1YMR171C GND1P38720 489 aaKnown RBP4.31□□□□□ -1.72
EAR1YMR171C IPI1P38803 334 aaPredicted RBP4.31□□□□□ -1.72
EAR1YMR171C NAB3P38996 802 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
EAR1YMR171C ISC1P40015 477 aaKnown RBP4.31□□□□□ -1.72
EAR1YMR171C SPO73P40031 143 aa4.31□□□□□ -1.72
EAR1YMR171C SOK1P40317 901 aa4.31□□□□□ -1.72
EAR1YMR171C PAC11P40960 533 aa4.31□□□□□ -1.72
EAR1YMR171C PRM8P53174 237 aa4.31□□□□□ -1.72
EAR1YMR171C MRPL50P53724 139 aa4.31□□□□□ -1.72
EAR1YMR171C YNL260CP53846 198 aa4.31□□□□□ -1.72
EAR1YMR171C EMI1Q04406 187 aa4.31□□□□□ -1.72
EAR1YMR171C COA4Q05809 96 aa4.31□□□□□ -1.72
EAR1YMR171C YLR345WQ06137 509 aa4.31□□□□□ -1.72
EAR1YMR171C ARR1Q06596 294 aa4.31□□□□□ -1.72
EAR1YMR171C SWA2Q06677 668 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms