RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C APC11Q12157 165 aa2.48□□□□□ -2.01
YMR050CYMR050C RPO21P04050 1733 aaKnown RBP2.48□□□□□ -2.01
YMR050CYMR050C PHO4P07270 312 aaKnown RBP2.48□□□□□ -2.01
YMR050CYMR050C TOP3P13099 656 aa2.48□□□□□ -2.01
YMR050CYMR050C VMA5P31412 392 aaKnown RBP2.48□□□□□ -2.01
YMR050CYMR050C MSN4P33749 630 aa2.48□□□□□ -2.01
YMR050CYMR050C PFS1P38872 237 aa2.48□□□□□ -2.01
YMR050CYMR050C YNL320WP42840 284 aa2.48□□□□□ -2.01
YMR050CYMR050C TAD1P53065 400 aa2.48□□□□□ -2.01
YMR050CYMR050C MAL13P53338 473 aa2.48□□□□□ -2.01
YMR050CYMR050C OAZ1Q02803 292 aa2.48□□□□□ -2.01
YMR050CYMR050C YDL114WQ07530 308 aa2.48□□□□□ -2.01
YMR050CYMR050C YOR365CQ08844 703 aa2.48□□□□□ -2.01
YMR050CYMR050C YDL009CQ12210 107 aa2.48□□□□□ -2.01
YMR050CYMR050C CAR1P00812 333 aaKnown RBP2.48□□□□□ -2.01
YMR050CYMR050C UTR1P21373 530 aa2.48□□□□□ -2.01
YMR050CYMR050C CSM1P25651 190 aa2.48□□□□□ -2.01
YMR050CYMR050C YPK3P38070 525 aa2.48□□□□□ -2.01
YMR050CYMR050C APQ12P40532 138 aa2.48□□□□□ -2.01
YMR050CYMR050C ECO1P43605 281 aa2.48□□□□□ -2.01
YMR050CYMR050C YJR142WP47173 342 aa2.48□□□□□ -2.01
YMR050CYMR050C CCC1P47818 322 aa2.48□□□□□ -2.01
YMR050CYMR050C SLD3P53135 668 aa2.48□□□□□ -2.01
YMR050CYMR050C SDC1Q03323 175 aa2.48□□□□□ -2.01
YMR050CYMR050C HAL9Q12180 1030 aa2.48□□□□□ -2.01
YMR050CYMR050C ORT1Q12375 292 aa2.48□□□□□ -2.01
YMR050CYMR050C GIS3Q12418 502 aa2.48□□□□□ -2.01
YMR050CYMR050C TAL1P15019 335 aaKnown RBP2.48□□□□□ -2.01
YMR050CYMR050C RPB8P20436 146 aa2.48□□□□□ -2.01
YMR050CYMR050C SIP1P32578 815 aa2.48□□□□□ -2.01
YMR050CYMR050C PET112P33893 541 aa2.48□□□□□ -2.01
YMR050CYMR050C UTP11P34247 250 aaPredicted RBP2.48□□□□□ -2.01
YMR050CYMR050C CTP1P38152 299 aa2.48□□□□□ -2.01
YMR050CYMR050C TIR3P40552 269 aa2.48□□□□□ -2.01
YMR050CYMR050C BNA2P47125 453 aa2.48□□□□□ -2.01
YMR050CYMR050C YIP5P53108 310 aa2.48□□□□□ -2.01
YMR050CYMR050C RPN14P53196 417 aa2.48□□□□□ -2.01
YMR050CYMR050C SKI8Q02793 397 aaPredicted RBP2.48□□□□□ -2.01
YMR050CYMR050C STD1Q02794 444 aa2.48□□□□□ -2.01
YMR050CYMR050C SWP1Q02795 286 aa2.48□□□□□ -2.01
YMR050CYMR050C FIN1Q03898 291 aa2.48□□□□□ -2.01
YMR050CYMR050C CAC2Q04199 468 aa2.48□□□□□ -2.01
YMR050CYMR050C PEX12Q04370 399 aa2.48□□□□□ -2.01
YMR050CYMR050C YMR034CQ05131 434 aaPredicted RBP2.48□□□□□ -2.01
YMR050CYMR050C SWA2Q06677 668 aa2.48□□□□□ -2.01
YMR050CYMR050C GUP2Q08929 609 aa2.48□□□□□ -2.01
YMR050CYMR050C GPM3Q12326 303 aa2.48□□□□□ -2.01
YMR050CYMR050C SCS22Q6Q595 175 aa2.48□□□□□ -2.01
YMR050CYMR050C TSC13Q99190 310 aa2.48□□□□□ -2.01
YMR050CYMR050C YLR149CQ99296 730 aa2.48□□□□□ -2.01
YMR050CYMR050C RIP1P08067 215 aa2.48□□□□□ -2.01
YMR050CYMR050C STE14P32584 239 aa2.48□□□□□ -2.01
YMR050CYMR050C PTC1P35182 281 aa2.48□□□□□ -2.01
YMR050CYMR050C AVT6P40074 448 aa2.48□□□□□ -2.01
YMR050CYMR050C PFK26P40433 827 aaKnown RBP2.48□□□□□ -2.01
YMR050CYMR050C YGR201CP42936 225 aa2.48□□□□□ -2.01
YMR050CYMR050C ALB1P47019 175 aaPredicted RBP2.48□□□□□ -2.01
YMR050CYMR050C PHB2P50085 310 aa2.48□□□□□ -2.01
YMR050CYMR050C COX18P53239 316 aa2.48□□□□□ -2.01
YMR050CYMR050C SSU72P53538 206 aaPredicted RBP2.48□□□□□ -2.01
YMR050CYMR050C BSC5P53755 489 aa2.48□□□□□ -2.01
YMR050CYMR050C PRM15Q03262 622 aa2.48□□□□□ -2.01
YMR050CYMR050C EBS1Q03466 884 aaKnown RBP2.48□□□□□ -2.01
YMR050CYMR050C SRL1Q08673 210 aa2.48□□□□□ -2.01
YMR050CYMR050C UBX3Q12229 455 aa2.48□□□□□ -2.01
YMR050CYMR050C MDY2Q12285 212 aa2.48□□□□□ -2.01
YMR050CYMR050C YCR100CP25606 316 aa2.47□□□□□ -2.01
YMR050CYMR050C HIR1P32479 840 aa2.47□□□□□ -2.01
YMR050CYMR050C SKN1P33336 771 aa2.47□□□□□ -2.01
YMR050CYMR050C TUL1P36096 758 aa2.47□□□□□ -2.01
YMR050CYMR050C CDS1P38221 457 aa2.47□□□□□ -2.01
YMR050CYMR050C SHG1P38337 142 aa2.47□□□□□ -2.01
YMR050CYMR050C YJR056CP47115 236 aa2.47□□□□□ -2.01
YMR050CYMR050C TIM13P53299 105 aa2.47□□□□□ -2.01
YMR050CYMR050C APJ1P53940 528 aa2.47□□□□□ -2.01
YMR050CYMR050C PKH3Q03306 898 aaPredicted RBP2.47□□□□□ -2.01
YMR050CYMR050C GIS1Q03833 894 aa2.47□□□□□ -2.01
YMR050CYMR050C CAB5Q03941 241 aa2.47□□□□□ -2.01
YMR050CYMR050C SMP3Q04174 516 aa2.47□□□□□ -2.01
YMR050CYMR050C YLR345WQ06137 509 aa2.47□□□□□ -2.01
YMR050CYMR050C SUE1Q06524 206 aa2.47□□□□□ -2.01
YMR050CYMR050C MUM3Q08750 479 aa2.47□□□□□ -2.01
YMR050CYMR050C AFT2Q08957 416 aa2.47□□□□□ -2.01
YMR050CYMR050C YLR053CQ12026 108 aa2.47□□□□□ -2.01
YMR050CYMR050C DFR1P07807 211 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
YMR050CYMR050C GEX1P25596 615 aa2.47□□□□□ -2.01
YMR050CYMR050C GEX2P36173 615 aa2.47□□□□□ -2.01
YMR050CYMR050C YBR056WP38081 501 aa2.47□□□□□ -2.01
YMR050CYMR050C YHR138CP38841 114 aaPredicted RBP2.47□□□□□ -2.01
YMR050CYMR050C MDM31P38880 579 aa2.47□□□□□ -2.01
YMR050CYMR050C COA1P40452 197 aa2.47□□□□□ -2.01
YMR050CYMR050C SOL1P50278 321 aa2.47□□□□□ -2.01
YMR050CYMR050C SYO1Q07395 620 aa2.47□□□□□ -2.01
YMR050CYMR050C MFG1Q07684 458 aa2.47□□□□□ -2.01
YMR050CYMR050C RRS1Q08746 203 aaKnown RBP2.47□□□□□ -2.01
YMR050CYMR050C TY1A-BRQ12217 440 aa2.47□□□□□ -2.01
YMR050CYMR050C ECM3Q99252 613 aa2.47□□□□□ -2.01
YMR050CYMR050C YAL064W-BO13512 126 aa2.47□□□□□ -2.01
YMR050CYMR050C URA6P15700 204 aa2.47□□□□□ -2.01
YMR050CYMR050C GAS1P22146 559 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms