RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	TAD3	Q9URQ3	322 aa		11.65	□□□□□ -0.54
LSM3	YLR438C-A	ERD2	P18414	219 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	SSZ1	P38788	538 aa	Known RBP	11.64	□□□□□ -0.55
LSM3	YLR438C-A	HRB1	P38922	454 aa	Known RBP RIP-Chip data	11.64	□□□□□ -0.55	not detected
LSM3	YLR438C-A	AST2	P39945	430 aa	Known RBP	11.64	□□□□□ -0.55
LSM3	YLR438C-A	PRE6	P40303	254 aa	Known RBP	11.64	□□□□□ -0.55
LSM3	YLR438C-A	YTA6	P40328	754 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	YIL166C	P40445	542 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	SWP82	P43554	623 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	COS1	P53822	381 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	ABZ2	Q03266	374 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	SMP3	Q04174	516 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	PAL1	Q05518	499 aa	Known RBP	11.64	□□□□□ -0.55
LSM3	YLR438C-A	NOP12	Q08208	459 aa	Known RBP	11.64	□□□□□ -0.55
LSM3	YLR438C-A	NPC2	Q12408	173 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	APC2	Q12440	853 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	NKP1	Q12493	238 aa		11.64	□□□□□ -0.55
LSM3	YLR438C-A	TOR1	P35169	2470 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	TFS1	P14306	219 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	CPR3	P25719	182 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	EMP70	P32802	667 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	BCK2	P33306	851 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	TIF3	P34167	436 aa	Known RBP	11.63	□□□□□ -0.55
LSM3	YLR438C-A	SRO77	P38163	1010 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	ISC1	P40015	477 aa	Known RBP	11.63	□□□□□ -0.55
LSM3	YLR438C-A	SOK1	P40317	901 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	MSS2	P40990	351 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	TFB3	Q03290	321 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	ERB1	Q04660	807 aa	Known RBP	11.63	□□□□□ -0.55
LSM3	YLR438C-A	DCR2	Q05924	578 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	CRT10	Q08226	957 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	RAX1	Q08760	435 aa		11.63	□□□□□ -0.55
LSM3	YLR438C-A	FMP40	Q08968	688 aa	Predicted RBP	11.63	□□□□□ -0.55
LSM3	YLR438C-A	DET1	Q99288	334 aa	Known RBP	11.63	□□□□□ -0.55
LSM3	YLR438C-A	TPK3	P05986	398 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	SNF6	P18888	332 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	NAM9	P27929	486 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	SNC1	P31109	117 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	PRP19	P32523	503 aa	Known RBP	11.62	□□□□□ -0.55
LSM3	YLR438C-A	ECM15	P35195	104 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	RPS20	P38701	121 aa	Known RBP	11.62	□□□□□ -0.55
LSM3	YLR438C-A	YNL195C	P40168	261 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	CHA4	P43634	648 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	IDS2	P46958	469 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	ECL1	P48235	211 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	SHE4	P51534	789 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	SNF12	P53628	566 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	YMD8	Q03697	442 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	SYO1	Q07395	620 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	YOR389W	Q08912	624 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	YPL278C	Q08990	100 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	YPR015C	Q12531	247 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	YDL007C-A	Q2V2Q0	85 aa		11.62	□□□□□ -0.55
LSM3	YLR438C-A	SEC62	P21825	274 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	MDL1	P33310	695 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	MCM7	P38132	845 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	PEX18	P38855	283 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	YEL068C	P39977	110 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	CUZ1	P53899	274 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	SPO19	Q03029	223 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	CGI121	Q03705	181 aa	Known RBP	11.61	□□□□□ -0.55
LSM3	YLR438C-A	SEI1	Q06058	285 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	YOL024W	Q08172	172 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	YOR032W-A	Q8TGS1	66 aa		11.61	□□□□□ -0.55
LSM3	YLR438C-A	YOL162W	P0CF19	215 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	YCR102C	P25608	368 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	HSP150	P32478	413 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	YKL077W	P36081	392 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	AHP1	P38013	176 aa	Known RBP	11.6	□□□□□ -0.55
LSM3	YLR438C-A	YLF2	P38746	405 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	TDA11	P38854	504 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	EGD2	P38879	174 aa	Known RBP	11.6	□□□□□ -0.55
LSM3	YLR438C-A	RRG9	P40156	214 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	SLD3	P53135	668 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	ATG17	Q06410	417 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	ERF2	Q06551	359 aa		11.6	□□□□□ -0.55
LSM3	YLR438C-A	PRP28	P23394	588 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	YCR100C	P25606	316 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	NUD1	P32336	851 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	VPH2	P32341	215 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	PDR3	P33200	976 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	OM14	P38325	134 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	HMS2	P47175	358 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	TMA20	P89886	181 aa	Predicted RBP	11.59	□□□□□ -0.55
LSM3	YLR438C-A	ENB1	Q08299	606 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	UIP4	Q08926	304 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	YDL109C	Q12103	647 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	DFG16	Q99234	619 aa		11.59	□□□□□ -0.55
LSM3	YLR438C-A	TEL1	P38110	2787 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	ADE5,7	P07244	802 aa	Known RBP	11.58	□□□□□ -0.56
LSM3	YLR438C-A	CAR2	P07991	424 aa	Known RBP	11.58	□□□□□ -0.56
LSM3	YLR438C-A	SAM35	P14693	329 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	ERD1	P16151	362 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	GRE3	P38715	327 aa	Known RBP RIP-Chip data	11.58	□□□□□ -0.56	not detected
LSM3	YLR438C-A	SER3	P40054	469 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	RET2	P43621	546 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	MDE1	P47095	244 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	YJR098C	P47139	656 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	YGL101W	P53144	215 aa		11.58	□□□□□ -0.56
LSM3	YLR438C-A	RHO5	P53879	331 aa	Known RBP	11.58	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms