RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	YOL159C	Q08300	171 aa		4.99	□□□□□ -1.61
CTR3	YLR411W	HSP33	Q08914	237 aa	Known RBP	4.99	□□□□□ -1.61
CTR3	YLR411W	DDC1	Q08949	612 aa		4.99	□□□□□ -1.61
CTR3	YLR411W	PGC1	Q08959	321 aa		4.99	□□□□□ -1.61
CTR3	YLR411W	HSP32	Q08992	237 aa		4.99	□□□□□ -1.61
CTR3	YLR411W	YLR112W	Q12130	139 aa		4.99	□□□□□ -1.61
CTR3	YLR411W	RMD5	Q12508	421 aa		4.99	□□□□□ -1.61
CTR3	YLR411W	DCP1	Q12517	231 aa	Predicted RBP	4.99	□□□□□ -1.61
CTR3	YLR411W	YPL119C-A	Q3E751	87 aa		4.99	□□□□□ -1.61
CTR3	YLR411W	RIF1	P29539	1916 aa		4.99	□□□□□ -1.61
CTR3	YLR411W	COX5A	P00424	153 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	SUC2	P00724	532 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	ARG3	P05150	338 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	SPT3	P06844	337 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	NFT1	P0CE68	1218 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	GIT1	P25346	518 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	RSA4	P25382	515 aa	Known RBP	4.98	□□□□□ -1.61
CTR3	YLR411W	HSP30	P25619	332 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	SYN8	P31377	255 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	MRP20	P32387	263 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	PTM1	P32857	523 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	CLG1	P35190	452 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	AST2	P39945	430 aa	Known RBP	4.98	□□□□□ -1.61
CTR3	YLR411W	YER034W	P40022	185 aa	Known RBP	4.98	□□□□□ -1.61
CTR3	YLR411W	YIL152W	P40455	235 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	GAB1	P41733	394 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	YFL040W	P43562	540 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	SNG1	P46950	547 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	AIM23	P47015	356 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	HOC1	P47124	396 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	GTO1	P48239	356 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	NUP100	Q02629	959 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	YML108W	Q03759	105 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	YDR124W	Q04608	324 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	ATG38	Q05789	226 aa	Known RBP	4.98	□□□□□ -1.61
CTR3	YLR411W	DBP9	Q06218	594 aa	Known RBP	4.98	□□□□□ -1.61
CTR3	YLR411W	ARR1	Q06596	294 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	POS5	Q06892	414 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	THP1	Q08231	455 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	JLP1	Q12358	412 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	AFI1	Q99222	893 aa		4.98	□□□□□ -1.61
CTR3	YLR411W	GAL3	P13045	520 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	CBS2	P14905	389 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	CLN1	P20437	546 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	OCA4	P25366	362 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	CMK1	P27466	446 aa	Known RBP	4.97	□□□□□ -1.61
CTR3	YLR411W	UBC8	P28263	218 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	BEM1	P29366	551 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	HCS1	P34243	683 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	ISC1	P40015	477 aa	Known RBP	4.97	□□□□□ -1.61
CTR3	YLR411W	UTP18	P40362	594 aa	Predicted RBP	4.97	□□□□□ -1.61
CTR3	YLR411W	ESL1	P40456	1118 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	IME4	P41833	600 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	YFR020W	P43600	232 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	NQM1	P53228	333 aa	Predicted RBP	4.97	□□□□□ -1.61
CTR3	YLR411W	ABZ2	Q03266	374 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	PLP1	Q04004	230 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	YMR111C	Q04461	462 aa	Predicted RBP	4.97	□□□□□ -1.61
CTR3	YLR411W	SYO1	Q07395	620 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	DTD1	Q07648	150 aa	Known RBP	4.97	□□□□□ -1.61
CTR3	YLR411W	YDR056C	Q12025	205 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	SMF3	Q12078	473 aa	Predicted RBP	4.97	□□□□□ -1.61
CTR3	YLR411W	HUA2	Q12134	243 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	YKL018C-A	Q3E7A7	99 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	LAA1	P39526	2014 aa		4.97	□□□□□ -1.61
CTR3	YLR411W	ADE4	P04046	510 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	HXK2	P04807	486 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	RPL42A	P0CX27	106 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	RPL42B	P0CX28	106 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	RSR1	P13856	272 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	NSP1	P14907	823 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	MET8	P15807	274 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	YCR016W	P25617	290 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	IMP3	P32899	183 aa	Predicted RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	LEU5	P38702	357 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	ARN2	P38724	620 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	YHL026C	P38740	315 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	YHR131C	P38835	850 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	ATG7	P38862	630 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	MNN9	P39107	395 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	RGI1	P40043	161 aa	Predicted RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	SER3	P40054	469 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	FMP10	P40098	244 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	RGI2	P40188	164 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	SEC24	P40482	926 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	VMA13	P41807	478 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	EFM3	P47163	339 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	RPN9	Q04062	393 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	SPG3	Q04398	127 aa	Predicted RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	APC4	Q04601	652 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	YLL007C	Q07799	665 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	WTM1	Q12363	437 aa	Known RBP	4.96	□□□□□ -1.62
CTR3	YLR411W	RPN6	Q12377	434 aa		4.96	□□□□□ -1.62
CTR3	YLR411W	HAP2	P06774	265 aa		4.95	□□□□□ -1.62
CTR3	YLR411W	ATP1	P07251	545 aa	Known RBP	4.95	□□□□□ -1.62
CTR3	YLR411W	SEC53	P07283	254 aa	Known RBP	4.95	□□□□□ -1.62
CTR3	YLR411W	CHA1	P25379	360 aa	Known RBP	4.95	□□□□□ -1.62
CTR3	YLR411W	YCR087C-A	P37263	153 aa		4.95	□□□□□ -1.62
CTR3	YLR411W	VMA22	P38784	181 aa		4.95	□□□□□ -1.62
CTR3	YLR411W	MTW1	P39731	289 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms