RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C LSO1Q3E827 93 aa8.48□□□□□ -1.05
SEC61YLR378C GAL4P04386 881 aa8.47□□□□□ -1.05
SEC61YLR378C YOL162WP0CF19 215 aa8.47□□□□□ -1.05
SEC61YLR378C MDH1P17505 334 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
SEC61YLR378C RPS27AP35997 82 aaKnown RBP8.47□□□□□ -1.05
SEC61YLR378C RPS27BP38711 82 aa8.47□□□□□ -1.05
SEC61YLR378C MBP1P39678 833 aa8.47□□□□□ -1.05
SEC61YLR378C ICE2P40499 491 aa8.47□□□□□ -1.05
SEC61YLR378C YIL086CP40503 102 aa8.47□□□□□ -1.05
SEC61YLR378C SMK1P41808 388 aa8.47□□□□□ -1.05
SEC61YLR378C YGL101WP53144 215 aa8.47□□□□□ -1.05
SEC61YLR378C TPC1P53257 314 aa8.47□□□□□ -1.05
SEC61YLR378C BUD17P53727 317 aa8.47□□□□□ -1.05
SEC61YLR378C RRP17Q04031 235 aaPredicted RBP8.47□□□□□ -1.05
SEC61YLR378C YPQ2Q06328 317 aa8.47□□□□□ -1.05
SEC61YLR378C APC2Q12440 853 aa8.47□□□□□ -1.05
SEC61YLR378C AI1P03875 834 aa8.46□□□□□ -1.05
SEC61YLR378C SEC61P32915 480 aa8.46□□□□□ -1.05
SEC61YLR378C YPT7P32939 208 aa8.46□□□□□ -1.05
SEC61YLR378C ECM15P35195 104 aa8.46□□□□□ -1.05
SEC61YLR378C YHR035WP38769 630 aa8.46□□□□□ -1.05
SEC61YLR378C YHR219WP38900 624 aa8.46□□□□□ -1.05
SEC61YLR378C YEL068CP39977 110 aa8.46□□□□□ -1.05
SEC61YLR378C JLP2P40206 208 aa8.46□□□□□ -1.05
SEC61YLR378C YIL166CP40445 542 aa8.46□□□□□ -1.05
SEC61YLR378C LEM3P42838 414 aa8.46□□□□□ -1.05
SEC61YLR378C TPP1Q03796 238 aa8.46□□□□□ -1.05
SEC61YLR378C GRX3Q03835 250 aa8.46□□□□□ -1.05
SEC61YLR378C YMR087WQ04299 284 aa8.46□□□□□ -1.05
SEC61YLR378C YLR346CQ06139 101 aa8.46□□□□□ -1.05
SEC61YLR378C YLR040CQ07988 224 aa8.46□□□□□ -1.05
SEC61YLR378C MXR2P25566 168 aa8.46□□□□□ -1.06
SEC61YLR378C PBN1P25580 416 aa8.46□□□□□ -1.06
SEC61YLR378C BAP2P38084 609 aa8.46□□□□□ -1.06
SEC61YLR378C YBR139WP38109 508 aa8.46□□□□□ -1.06
SEC61YLR378C ANS1P38832 159 aa8.46□□□□□ -1.06
SEC61YLR378C MDE1P47095 244 aa8.46□□□□□ -1.06
SEC61YLR378C SPT20P50875 604 aa8.46□□□□□ -1.06
SEC61YLR378C COS10P52924 374 aa8.46□□□□□ -1.06
SEC61YLR378C CIK1Q01649 594 aa8.46□□□□□ -1.06
SEC61YLR378C MAK3Q03503 176 aa8.46□□□□□ -1.06
SEC61YLR378C INP1Q03694 420 aa8.46□□□□□ -1.06
SEC61YLR378C SYO1Q07395 620 aa8.46□□□□□ -1.06
SEC61YLR378C CRT10Q08226 957 aa8.46□□□□□ -1.06
SEC61YLR378C BRX1Q08235 291 aaKnown RBP8.46□□□□□ -1.06
SEC61YLR378C SPC3Q12133 184 aa8.46□□□□□ -1.06
SEC61YLR378C PSF1Q12488 208 aa8.46□□□□□ -1.06
SEC61YLR378C POL2P21951 2222 aaKnown RBP8.45□□□□□ -1.06
SEC61YLR378C YCR006CP25350 157 aa8.45□□□□□ -1.06
SEC61YLR378C NPL6P32832 435 aa8.45□□□□□ -1.06
SEC61YLR378C YKL077WP36081 392 aa8.45□□□□□ -1.06
SEC61YLR378C SEA4P38164 1038 aa8.45□□□□□ -1.06
SEC61YLR378C UTP25P40498 721 aaKnown RBP8.45□□□□□ -1.06
SEC61YLR378C YJR141WP47172 347 aaPredicted RBP8.45□□□□□ -1.06
SEC61YLR378C MNT4P53745 580 aa8.45□□□□□ -1.06
SEC61YLR378C SEC13Q04491 297 aaKnown RBP8.45□□□□□ -1.06
SEC61YLR378C ELP6Q04868 273 aa8.45□□□□□ -1.06
SEC61YLR378C MLC2Q06580 163 aa8.45□□□□□ -1.06
SEC61YLR378C YOL036WQ08206 761 aa8.45□□□□□ -1.06
SEC61YLR378C SOG2Q08817 791 aa8.45□□□□□ -1.06
SEC61YLR378C REX3Q12090 404 aa8.45□□□□□ -1.06
SEC61YLR378C YDR061WQ12298 539 aa8.45□□□□□ -1.06
SEC61YLR378C PCL9Q12477 304 aa8.45□□□□□ -1.06
SEC61YLR378C DET1Q99288 334 aaKnown RBP8.45□□□□□ -1.06
SEC61YLR378C RPL20AP0CX23 172 aaKnown RBP8.44□□□□□ -1.06
SEC61YLR378C RPL20BP0CX24 172 aaPredicted RBP8.44□□□□□ -1.06
SEC61YLR378C DPM1P14020 267 aaKnown RBP8.44□□□□□ -1.06
SEC61YLR378C PRP28P23394 588 aa8.44□□□□□ -1.06
SEC61YLR378C GPI12P23797 304 aa8.44□□□□□ -1.06
SEC61YLR378C RPL24BP24000 155 aaKnown RBP8.44□□□□□ -1.06
SEC61YLR378C SNC1P31109 117 aa8.44□□□□□ -1.06
SEC61YLR378C NDC1P32500 655 aa8.44□□□□□ -1.06
SEC61YLR378C SNU114P36048 1008 aaKnown RBP8.44□□□□□ -1.06
SEC61YLR378C AMN1P38285 549 aaPredicted RBP8.44□□□□□ -1.06
SEC61YLR378C ALP1P38971 573 aa8.44□□□□□ -1.06
SEC61YLR378C AIM10P39965 576 aaKnown RBP8.44□□□□□ -1.06
SEC61YLR378C YIL152WP40455 235 aa8.44□□□□□ -1.06
SEC61YLR378C IRC7P43623 340 aa8.44□□□□□ -1.06
SEC61YLR378C LSG1P53145 640 aaKnown RBP8.44□□□□□ -1.06
SEC61YLR378C RBG2P53295 368 aaKnown RBP8.44□□□□□ -1.06
SEC61YLR378C YGR266WP53326 701 aa8.44□□□□□ -1.06
SEC61YLR378C YOR238WQ08634 303 aa8.44□□□□□ -1.06
SEC61YLR378C MED2Q12124 431 aa8.44□□□□□ -1.06
SEC61YLR378C MET2P08465 486 aa8.43□□□□□ -1.06
SEC61YLR378C YSF3P0C074 85 aaPredicted RBP8.43□□□□□ -1.06
SEC61YLR378C GIT1P25346 518 aa8.43□□□□□ -1.06
SEC61YLR378C YCR100CP25606 316 aa8.43□□□□□ -1.06
SEC61YLR378C SUR1P33300 382 aa8.43□□□□□ -1.06
SEC61YLR378C CHL4P38907 458 aa8.43□□□□□ -1.06
SEC61YLR378C PZF1P39933 429 aa8.43□□□□□ -1.06
SEC61YLR378C YJR098CP47139 656 aa8.43□□□□□ -1.06
SEC61YLR378C NRM1P53718 249 aa8.43□□□□□ -1.06
SEC61YLR378C OST6Q03723 332 aa8.43□□□□□ -1.06
SEC61YLR378C ERB1Q04660 807 aaKnown RBP8.43□□□□□ -1.06
SEC61YLR378C NBA1Q08229 501 aaKnown RBP8.43□□□□□ -1.06
SEC61YLR378C DCP1Q12517 231 aaPredicted RBP8.43□□□□□ -1.06
SEC61YLR378C AI4P03878 556 aa8.42□□□□□ -1.06
SEC61YLR378C SAC7P17121 654 aa8.42□□□□□ -1.06
SEC61YLR378C ERD2P18414 219 aa8.42□□□□□ -1.06
SEC61YLR378C KGD1P20967 1014 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms