RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C LDS2Q08218 356 aa2.3□□□□□ -2.04
ATG38YLR211C DCI1Q08558 271 aa2.3□□□□□ -2.04
ATG38YLR211C GPM3Q12326 303 aa2.3□□□□□ -2.04
ATG38YLR211C ISA2Q12425 185 aa2.3□□□□□ -2.04
ATG38YLR211C SPT7P35177 1332 aa2.29□□□□□ -2.04
ATG38YLR211C HSP82P02829 709 aaKnown RBP2.29□□□□□ -2.04
ATG38YLR211C ASP3-2P0CX77 362 aa2.29□□□□□ -2.04
ATG38YLR211C ASP3-3P0CX78 362 aa2.29□□□□□ -2.04
ATG38YLR211C ASP3-4P0CX79 362 aa2.29□□□□□ -2.04
ATG38YLR211C ASP3-1P0CZ17 362 aa2.29□□□□□ -2.04
ATG38YLR211C MNE1P24720 663 aa2.29□□□□□ -2.04
ATG38YLR211C LTV1P34078 463 aa2.29□□□□□ -2.04
ATG38YLR211C SHE1P38200 338 aa2.29□□□□□ -2.04
ATG38YLR211C CAJ1P39101 391 aa2.29□□□□□ -2.04
ATG38YLR211C YGR015CP53208 328 aa2.29□□□□□ -2.04
ATG38YLR211C RTT102P53330 157 aa2.29□□□□□ -2.04
ATG38YLR211C FSH2Q05015 223 aa2.29□□□□□ -2.04
ATG38YLR211C HEM4P06174 275 aa2.28□□□□□ -2.04
ATG38YLR211C DAL5P15365 543 aa2.28□□□□□ -2.04
ATG38YLR211C DBP7P36120 742 aaKnown RBP2.28□□□□□ -2.04
ATG38YLR211C YBR241CP38142 488 aa2.28□□□□□ -2.04
ATG38YLR211C RXT2P38255 430 aa2.28□□□□□ -2.04
ATG38YLR211C RRT13P40042 185 aa2.28□□□□□ -2.04
ATG38YLR211C JEM1P40358 645 aa2.28□□□□□ -2.04
ATG38YLR211C YJR054WP47114 497 aa2.28□□□□□ -2.04
ATG38YLR211C CDH1P53197 566 aa2.28□□□□□ -2.04
ATG38YLR211C GYL1Q04322 720 aa2.28□□□□□ -2.04
ATG38YLR211C EPT1P22140 391 aa2.27□□□□□ -2.05
ATG38YLR211C PMT2P31382 759 aa2.27□□□□□ -2.05
ATG38YLR211C FRM2P37261 193 aa2.27□□□□□ -2.05
ATG38YLR211C ECM34P38728 170 aa2.27□□□□□ -2.05
ATG38YLR211C LCB2P40970 561 aa2.27□□□□□ -2.05
ATG38YLR211C RPN14P53196 417 aa2.27□□□□□ -2.05
ATG38YLR211C DIA1P54005 336 aa2.27□□□□□ -2.05
ATG38YLR211C YDR541CQ03049 344 aa2.27□□□□□ -2.05
ATG38YLR211C MRX11Q03079 207 aa2.27□□□□□ -2.05
ATG38YLR211C DDC1Q08949 612 aa2.27□□□□□ -2.05
ATG38YLR211C YDL109CQ12103 647 aa2.27□□□□□ -2.05
ATG38YLR211C HMS1Q12398 434 aa2.27□□□□□ -2.05
ATG38YLR211C PAR32Q12515 295 aaKnown RBP2.27□□□□□ -2.05
ATG38YLR211C AUS1Q08409 1394 aa2.26□□□□□ -2.05
ATG38YLR211C PDE2P06776 526 aa2.26□□□□□ -2.05
ATG38YLR211C RPL23AP0CX41 137 aaKnown RBP2.26□□□□□ -2.05
ATG38YLR211C RPL23BP0CX42 137 aaKnown RBP2.26□□□□□ -2.05
ATG38YLR211C LDS1P31379 325 aa2.26□□□□□ -2.05
ATG38YLR211C MDL1P33310 695 aa2.26□□□□□ -2.05
ATG38YLR211C PTK1P36002 662 aaPredicted RBP2.26□□□□□ -2.05
ATG38YLR211C SHE3P38272 425 aaKnown RBP2.26□□□□□ -2.05
ATG38YLR211C PES4P39684 611 aa2.26□□□□□ -2.05
ATG38YLR211C GDI1P39958 451 aaKnown RBP2.26□□□□□ -2.05
ATG38YLR211C SPO73P40031 143 aa2.26□□□□□ -2.05
ATG38YLR211C RNH201P53942 307 aa2.26□□□□□ -2.05
ATG38YLR211C PGC1Q08959 321 aa2.26□□□□□ -2.05
ATG38YLR211C YAL067W-AQ8TGK6 75 aa2.26□□□□□ -2.05
ATG38YLR211C RPS14AP06367 137 aaKnown RBP2.25□□□□□ -2.05
ATG38YLR211C TPM1P17536 199 aaKnown RBP2.25□□□□□ -2.05
ATG38YLR211C RRP7P25368 297 aaPredicted RBP2.25□□□□□ -2.05
ATG38YLR211C KRR1P25586 316 aaPredicted RBP2.25□□□□□ -2.05
ATG38YLR211C SPP381P38282 291 aaPredicted RBP2.25□□□□□ -2.05
ATG38YLR211C POP2P39008 433 aa2.25□□□□□ -2.05
ATG38YLR211C RPS14BP39516 138 aaKnown RBP2.25□□□□□ -2.05
ATG38YLR211C ZRG17P53735 605 aa2.25□□□□□ -2.05
ATG38YLR211C CIK1Q01649 594 aa2.25□□□□□ -2.05
ATG38YLR211C YLH47Q06493 454 aa2.25□□□□□ -2.05
ATG38YLR211C NFI1Q12216 726 aa2.25□□□□□ -2.05
ATG38YLR211C FUS3P16892 353 aaKnown RBP2.24□□□□□ -2.05
ATG38YLR211C RPL16AP26784 199 aaKnown RBP2.24□□□□□ -2.05
ATG38YLR211C CBF5P33322 483 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
ATG38YLR211C MNL1P38888 796 aa2.24□□□□□ -2.05
ATG38YLR211C SEC28P40509 296 aaKnown RBP2.24□□□□□ -2.05
ATG38YLR211C EFM4P40516 257 aa2.24□□□□□ -2.05
ATG38YLR211C YJL055WP47044 245 aa2.24□□□□□ -2.05
ATG38YLR211C MPP10P47083 593 aaKnown RBP2.24□□□□□ -2.05
ATG38YLR211C AAD15Q08361 143 aa2.24□□□□□ -2.05
ATG38YLR211C SLM3Q12093 417 aa2.24□□□□□ -2.05
ATG38YLR211C LDB17Q12342 491 aa2.24□□□□□ -2.05
ATG38YLR211C APC2Q12440 853 aa2.24□□□□□ -2.05
ATG38YLR211C FRE6Q12473 712 aa2.24□□□□□ -2.05
ATG38YLR211C RPL1AP0CX43 217 aaKnown RBP2.23□□□□□ -2.05
ATG38YLR211C RPL1BP0CX44 217 aaKnown RBP2.23□□□□□ -2.05
ATG38YLR211C TRX1P22217 103 aaKnown RBP2.23□□□□□ -2.05
ATG38YLR211C MIR1P23641 311 aaKnown RBP2.23□□□□□ -2.05
ATG38YLR211C SPS19P32573 292 aaKnown RBP2.23□□□□□ -2.05
ATG38YLR211C TRR2P38816 342 aa2.23□□□□□ -2.05
ATG38YLR211C MLH1P38920 769 aa2.23□□□□□ -2.05
ATG38YLR211C MEP1P40260 492 aa2.23□□□□□ -2.05
ATG38YLR211C STB1P42845 420 aa2.23□□□□□ -2.05
ATG38YLR211C GPI8P49018 411 aa2.23□□□□□ -2.05
ATG38YLR211C IPK1Q06667 281 aa2.23□□□□□ -2.05
ATG38YLR211C SPE3Q12074 293 aaKnown RBP2.23□□□□□ -2.05
ATG38YLR211C STF1P01098 86 aa2.22□□□□□ -2.05
ATG38YLR211C AST1P35183 429 aa2.22□□□□□ -2.05
ATG38YLR211C AIM23P47015 356 aa2.22□□□□□ -2.05
ATG38YLR211C SED5Q01590 340 aa2.22□□□□□ -2.05
ATG38YLR211C SCS7Q03529 384 aa2.22□□□□□ -2.05
ATG38YLR211C HRT1Q08273 121 aa2.22□□□□□ -2.05
ATG38YLR211C RPN5Q12250 445 aaKnown RBP2.22□□□□□ -2.05
ATG38YLR211C SRB2P34162 210 aa2.21□□□□□ -2.06
ATG38YLR211C LAS1P36146 502 aaPredicted RBP2.21□□□□□ -2.06
ATG38YLR211C YIR035CP40579 254 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms